Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124023315

Identifier: 124023315

GI number: 124023315

Start: 1413452

End: 1414384

Strand: Reverse

Name: 124023315

Synonym: P9303_16131

Alternate gene names: NA

Gene position: 1414384-1413452 (Counterclockwise)

Preceding gene: 124023318

Following gene: 124023314

Centisome position: 52.72

GC content: 43.62

Gene sequence:

>933_bases
ATGGGACAGACAAATCAAATCCAGGGATCTAGATCTCGATATGTACTTCTCGTCTTGATTGCTCTAATCTGGGGATCTCA
GTTCTTACTTAATGATCTTGCTCTAGAGATCTTTACTCCTCAAGCAGTTTCATGGCTTAGAGCGACGATTGGATTCCTAA
CACTGAGTGGATTCTTGTTTATTTTGCCTGAAGCTCACGACAATACGGTTTCAAAGATCAGTTATTGGCGCCGTATCATT
ATGATTGGCTTCTTTGAAGCAACTCTCCCTTTCTTCCTTGTTGCCTGGGGTCAGCAACATGTCAACAGTGCTATTGCGGC
GATCCTGATGTCACTCGTAGCAATCTTTACCCTAATTTTAGTTGTTGTTTTTGTTCGCAGTGAGCCAGTTACGAGAGGAA
AGTTTATTGGTATTGCTCTCGGTTTTGCAGGTGTTGTTATCTTGCTATGGCCGCAGGTTAGCCAGTCTCAACAAGGTAAT
AGCCTACTTGGAAGTGCTGCAATTCTAACTGCTGCACTTAGCTTTTCGATTAGTCTTGTATTGATTAGAACCCTGCCAGA
GATGGGTACTCCGATAAAAATTGCAAGAGATATACTTCTTTGTGGTGCCGTCGAGCTAGGTGCTCTACTGCTTTTGCTTG
GCCAACCATTAACGCACCATCCTCTAGAGAGTAATGCCATGCTTGCAATGGTTGCTCAGGGTGCTTTTGCTGGAGGTCTG
GTTTATGTGTTGTATGTTCGTCTTGTTGGTCTTGCTGGAGCTTCATTTGCCGGCTTCGTTAACTATCTAGTCCCTTTAGT
AGGAGTTTTTCTAGGAGTTGTTTTTCTGCAGAACAAGCTTTCAGCAAGTGCCTATCTTTCTCTGGTGATTTTAGCGCTTG
CAGTCTTTGCGAGTGAGTGGAAGCCAACTCGTAAATTAGTAGGTAGGCAATAA

Upstream 100 bases:

>100_bases
CAATTGATAATGCTCAGATGCTTGAGCTAAGCTTCCTTAAGCATATGAACTAGGATGCTTCTTATGGCAGTAGGATTAAA
AAATATATAGCTAGAAAGCG

Downstream 100 bases:

>100_bases
TCTCAATGGCAAATCTTTAAACAGTCTTTTAGTTTTCATATTGATTATAGAATTTATTGTTTTGCAATTAACATGATAAA
TTATCTACTTAGAGGATTCA

Product: integral membrane protein, DUF6

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MGQTNQIQGSRSRYVLLVLIALIWGSQFLLNDLALEIFTPQAVSWLRATIGFLTLSGFLFILPEAHDNTVSKISYWRRII
MIGFFEATLPFFLVAWGQQHVNSAIAAILMSLVAIFTLILVVVFVRSEPVTRGKFIGIALGFAGVVILLWPQVSQSQQGN
SLLGSAAILTAALSFSISLVLIRTLPEMGTPIKIARDILLCGAVELGALLLLLGQPLTHHPLESNAMLAMVAQGAFAGGL
VYVLYVRLVGLAGASFAGFVNYLVPLVGVFLGVVFLQNKLSASAYLSLVILALAVFASEWKPTRKLVGRQ

Sequences:

>Translated_310_residues
MGQTNQIQGSRSRYVLLVLIALIWGSQFLLNDLALEIFTPQAVSWLRATIGFLTLSGFLFILPEAHDNTVSKISYWRRII
MIGFFEATLPFFLVAWGQQHVNSAIAAILMSLVAIFTLILVVVFVRSEPVTRGKFIGIALGFAGVVILLWPQVSQSQQGN
SLLGSAAILTAALSFSISLVLIRTLPEMGTPIKIARDILLCGAVELGALLLLLGQPLTHHPLESNAMLAMVAQGAFAGGL
VYVLYVRLVGLAGASFAGFVNYLVPLVGVFLGVVFLQNKLSASAYLSLVILALAVFASEWKPTRKLVGRQ
>Mature_309_residues
GQTNQIQGSRSRYVLLVLIALIWGSQFLLNDLALEIFTPQAVSWLRATIGFLTLSGFLFILPEAHDNTVSKISYWRRIIM
IGFFEATLPFFLVAWGQQHVNSAIAAILMSLVAIFTLILVVVFVRSEPVTRGKFIGIALGFAGVVILLWPQVSQSQQGNS
LLGSAAILTAALSFSISLVLIRTLPEMGTPIKIARDILLCGAVELGALLLLLGQPLTHHPLESNAMLAMVAQGAFAGGLV
YVLYVRLVGLAGASFAGFVNYLVPLVGVFLGVVFLQNKLSASAYLSLVILALAVFASEWKPTRKLVGRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33467; Mature: 33336

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQTNQIQGSRSRYVLLVLIALIWGSQFLLNDLALEIFTPQAVSWLRATIGFLTLSGFLF
CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHE
ILPEAHDNTVSKISYWRRIIMIGFFEATLPFFLVAWGQQHVNSAIAAILMSLVAIFTLIL
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVVFVRSEPVTRGKFIGIALGFAGVVILLWPQVSQSQQGNSLLGSAAILTAALSFSISLV
HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LIRTLPEMGTPIKIARDILLCGAVELGALLLLLGQPLTHHPLESNAMLAMVAQGAFAGGL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHH
VYVLYVRLVGLAGASFAGFVNYLVPLVGVFLGVVFLQNKLSASAYLSLVILALAVFASEW
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KPTRKLVGRQ
CHHHHHCCCC
>Mature Secondary Structure 
GQTNQIQGSRSRYVLLVLIALIWGSQFLLNDLALEIFTPQAVSWLRATIGFLTLSGFLF
CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHE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CHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA