| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023315
Identifier: 124023315
GI number: 124023315
Start: 1413452
End: 1414384
Strand: Reverse
Name: 124023315
Synonym: P9303_16131
Alternate gene names: NA
Gene position: 1414384-1413452 (Counterclockwise)
Preceding gene: 124023318
Following gene: 124023314
Centisome position: 52.72
GC content: 43.62
Gene sequence:
>933_bases ATGGGACAGACAAATCAAATCCAGGGATCTAGATCTCGATATGTACTTCTCGTCTTGATTGCTCTAATCTGGGGATCTCA GTTCTTACTTAATGATCTTGCTCTAGAGATCTTTACTCCTCAAGCAGTTTCATGGCTTAGAGCGACGATTGGATTCCTAA CACTGAGTGGATTCTTGTTTATTTTGCCTGAAGCTCACGACAATACGGTTTCAAAGATCAGTTATTGGCGCCGTATCATT ATGATTGGCTTCTTTGAAGCAACTCTCCCTTTCTTCCTTGTTGCCTGGGGTCAGCAACATGTCAACAGTGCTATTGCGGC GATCCTGATGTCACTCGTAGCAATCTTTACCCTAATTTTAGTTGTTGTTTTTGTTCGCAGTGAGCCAGTTACGAGAGGAA AGTTTATTGGTATTGCTCTCGGTTTTGCAGGTGTTGTTATCTTGCTATGGCCGCAGGTTAGCCAGTCTCAACAAGGTAAT AGCCTACTTGGAAGTGCTGCAATTCTAACTGCTGCACTTAGCTTTTCGATTAGTCTTGTATTGATTAGAACCCTGCCAGA GATGGGTACTCCGATAAAAATTGCAAGAGATATACTTCTTTGTGGTGCCGTCGAGCTAGGTGCTCTACTGCTTTTGCTTG GCCAACCATTAACGCACCATCCTCTAGAGAGTAATGCCATGCTTGCAATGGTTGCTCAGGGTGCTTTTGCTGGAGGTCTG GTTTATGTGTTGTATGTTCGTCTTGTTGGTCTTGCTGGAGCTTCATTTGCCGGCTTCGTTAACTATCTAGTCCCTTTAGT AGGAGTTTTTCTAGGAGTTGTTTTTCTGCAGAACAAGCTTTCAGCAAGTGCCTATCTTTCTCTGGTGATTTTAGCGCTTG CAGTCTTTGCGAGTGAGTGGAAGCCAACTCGTAAATTAGTAGGTAGGCAATAA
Upstream 100 bases:
>100_bases CAATTGATAATGCTCAGATGCTTGAGCTAAGCTTCCTTAAGCATATGAACTAGGATGCTTCTTATGGCAGTAGGATTAAA AAATATATAGCTAGAAAGCG
Downstream 100 bases:
>100_bases TCTCAATGGCAAATCTTTAAACAGTCTTTTAGTTTTCATATTGATTATAGAATTTATTGTTTTGCAATTAACATGATAAA TTATCTACTTAGAGGATTCA
Product: integral membrane protein, DUF6
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MGQTNQIQGSRSRYVLLVLIALIWGSQFLLNDLALEIFTPQAVSWLRATIGFLTLSGFLFILPEAHDNTVSKISYWRRII MIGFFEATLPFFLVAWGQQHVNSAIAAILMSLVAIFTLILVVVFVRSEPVTRGKFIGIALGFAGVVILLWPQVSQSQQGN SLLGSAAILTAALSFSISLVLIRTLPEMGTPIKIARDILLCGAVELGALLLLLGQPLTHHPLESNAMLAMVAQGAFAGGL VYVLYVRLVGLAGASFAGFVNYLVPLVGVFLGVVFLQNKLSASAYLSLVILALAVFASEWKPTRKLVGRQ
Sequences:
>Translated_310_residues MGQTNQIQGSRSRYVLLVLIALIWGSQFLLNDLALEIFTPQAVSWLRATIGFLTLSGFLFILPEAHDNTVSKISYWRRII MIGFFEATLPFFLVAWGQQHVNSAIAAILMSLVAIFTLILVVVFVRSEPVTRGKFIGIALGFAGVVILLWPQVSQSQQGN SLLGSAAILTAALSFSISLVLIRTLPEMGTPIKIARDILLCGAVELGALLLLLGQPLTHHPLESNAMLAMVAQGAFAGGL VYVLYVRLVGLAGASFAGFVNYLVPLVGVFLGVVFLQNKLSASAYLSLVILALAVFASEWKPTRKLVGRQ >Mature_309_residues GQTNQIQGSRSRYVLLVLIALIWGSQFLLNDLALEIFTPQAVSWLRATIGFLTLSGFLFILPEAHDNTVSKISYWRRIIM IGFFEATLPFFLVAWGQQHVNSAIAAILMSLVAIFTLILVVVFVRSEPVTRGKFIGIALGFAGVVILLWPQVSQSQQGNS LLGSAAILTAALSFSISLVLIRTLPEMGTPIKIARDILLCGAVELGALLLLLGQPLTHHPLESNAMLAMVAQGAFAGGLV YVLYVRLVGLAGASFAGFVNYLVPLVGVFLGVVFLQNKLSASAYLSLVILALAVFASEWKPTRKLVGRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33467; Mature: 33336
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQTNQIQGSRSRYVLLVLIALIWGSQFLLNDLALEIFTPQAVSWLRATIGFLTLSGFLF CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHE ILPEAHDNTVSKISYWRRIIMIGFFEATLPFFLVAWGQQHVNSAIAAILMSLVAIFTLIL EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVFVRSEPVTRGKFIGIALGFAGVVILLWPQVSQSQQGNSLLGSAAILTAALSFSISLV HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LIRTLPEMGTPIKIARDILLCGAVELGALLLLLGQPLTHHPLESNAMLAMVAQGAFAGGL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHH VYVLYVRLVGLAGASFAGFVNYLVPLVGVFLGVVFLQNKLSASAYLSLVILALAVFASEW HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KPTRKLVGRQ CHHHHHCCCC >Mature Secondary Structure GQTNQIQGSRSRYVLLVLIALIWGSQFLLNDLALEIFTPQAVSWLRATIGFLTLSGFLF CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHE ILPEAHDNTVSKISYWRRIIMIGFFEATLPFFLVAWGQQHVNSAIAAILMSLVAIFTLIL EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVFVRSEPVTRGKFIGIALGFAGVVILLWPQVSQSQQGNSLLGSAAILTAALSFSISLV HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LIRTLPEMGTPIKIARDILLCGAVELGALLLLLGQPLTHHPLESNAMLAMVAQGAFAGGL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHH VYVLYVRLVGLAGASFAGFVNYLVPLVGVFLGVVFLQNKLSASAYLSLVILALAVFASEW HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KPTRKLVGRQ CHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA