| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023314
Identifier: 124023314
GI number: 124023314
Start: 1412744
End: 1413220
Strand: Reverse
Name: 124023314
Synonym: P9303_16121
Alternate gene names: NA
Gene position: 1413220-1412744 (Counterclockwise)
Preceding gene: 124023315
Following gene: 124023313
Centisome position: 52.68
GC content: 51.99
Gene sequence:
>477_bases ATGTTCGCCCGACTACTTGGCTTTGCTGCTGCTGTCCTTCTACTTCTATTGCCACTGCAACCAAGCTGGGCAATCATGAA TCATTCCCAACAGGTGTTGGTCAATGCAGATTTCTCGAACCAAGATCTGCGAGGCGACACATTTAATCTTGCCAACCTGC GCGAGGCCAATCTATCTGGGAGTGATCTAGAAGGATCCACCCTTTTTGGAGCCAAGCTTCACGATGCCAACCTCAGCAAC ACCAACTTGCGAGATTCCACACTTGATTCCGCCATATTTGATGGAACTGATCTCACCAATGCAGTGCTTGAGGACGCCTT CGCCTTCAACACCCGCTTCAAAAACGTGACCATTACAGGTGCTGACTTCACCAATGTGCCCCTGCGAGGCGATGCGCTCA CAACGCTGTGTGAGGTGGCTGAGGGAACTAACCCGATCACAGGTCGCAACACTGCAGACAGCCTGGGCTGCAGCTAA
Upstream 100 bases:
>100_bases TTCATGGGGATGCGGATGCGTAGCTCAGCAAACTTCTTTCTCATGAGCCATCATTCCTCTACCTATAGACCTATGGTTTA ACTATTTAACCCCTATCCCA
Downstream 100 bases:
>100_bases ATACTCCACGCCAACCACTCCGATGAGTTTCGATCCCCGCAGTCTTGAACGTCTACGTGAACTGGGTCGCGAGTTACCCC GGCCCTTGCCAACACCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein; Secreted Pentapeptide Repeats Protein; Pentapeptide Repeat Family Protein
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MFARLLGFAAAVLLLLLPLQPSWAIMNHSQQVLVNADFSNQDLRGDTFNLANLREANLSGSDLEGSTLFGAKLHDANLSN TNLRDSTLDSAIFDGTDLTNAVLEDAFAFNTRFKNVTITGADFTNVPLRGDALTTLCEVAEGTNPITGRNTADSLGCS
Sequences:
>Translated_158_residues MFARLLGFAAAVLLLLLPLQPSWAIMNHSQQVLVNADFSNQDLRGDTFNLANLREANLSGSDLEGSTLFGAKLHDANLSN TNLRDSTLDSAIFDGTDLTNAVLEDAFAFNTRFKNVTITGADFTNVPLRGDALTTLCEVAEGTNPITGRNTADSLGCS >Mature_158_residues MFARLLGFAAAVLLLLLPLQPSWAIMNHSQQVLVNADFSNQDLRGDTFNLANLREANLSGSDLEGSTLFGAKLHDANLSN TNLRDSTLDSAIFDGTDLTNAVLEDAFAFNTRFKNVTITGADFTNVPLRGDALTTLCEVAEGTNPITGRNTADSLGCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16880; Mature: 16880
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFARLLGFAAAVLLLLLPLQPSWAIMNHSQQVLVNADFSNQDLRGDTFNLANLREANLSG CHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCCEECCCCCEECCCCC SDLEGSTLFGAKLHDANLSNTNLRDSTLDSAIFDGTDLTNAVLEDAFAFNTRFKNVTITG CCCCCCEEECEEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEC ADFTNVPLRGDALTTLCEVAEGTNPITGRNTADSLGCS CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFARLLGFAAAVLLLLLPLQPSWAIMNHSQQVLVNADFSNQDLRGDTFNLANLREANLSG CHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCCEECCCCCEECCCCC SDLEGSTLFGAKLHDANLSNTNLRDSTLDSAIFDGTDLTNAVLEDAFAFNTRFKNVTITG CCCCCCEEECEEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEC ADFTNVPLRGDALTTLCEVAEGTNPITGRNTADSLGCS CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA