Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124023314

Identifier: 124023314

GI number: 124023314

Start: 1412744

End: 1413220

Strand: Reverse

Name: 124023314

Synonym: P9303_16121

Alternate gene names: NA

Gene position: 1413220-1412744 (Counterclockwise)

Preceding gene: 124023315

Following gene: 124023313

Centisome position: 52.68

GC content: 51.99

Gene sequence:

>477_bases
ATGTTCGCCCGACTACTTGGCTTTGCTGCTGCTGTCCTTCTACTTCTATTGCCACTGCAACCAAGCTGGGCAATCATGAA
TCATTCCCAACAGGTGTTGGTCAATGCAGATTTCTCGAACCAAGATCTGCGAGGCGACACATTTAATCTTGCCAACCTGC
GCGAGGCCAATCTATCTGGGAGTGATCTAGAAGGATCCACCCTTTTTGGAGCCAAGCTTCACGATGCCAACCTCAGCAAC
ACCAACTTGCGAGATTCCACACTTGATTCCGCCATATTTGATGGAACTGATCTCACCAATGCAGTGCTTGAGGACGCCTT
CGCCTTCAACACCCGCTTCAAAAACGTGACCATTACAGGTGCTGACTTCACCAATGTGCCCCTGCGAGGCGATGCGCTCA
CAACGCTGTGTGAGGTGGCTGAGGGAACTAACCCGATCACAGGTCGCAACACTGCAGACAGCCTGGGCTGCAGCTAA

Upstream 100 bases:

>100_bases
TTCATGGGGATGCGGATGCGTAGCTCAGCAAACTTCTTTCTCATGAGCCATCATTCCTCTACCTATAGACCTATGGTTTA
ACTATTTAACCCCTATCCCA

Downstream 100 bases:

>100_bases
ATACTCCACGCCAACCACTCCGATGAGTTTCGATCCCCGCAGTCTTGAACGTCTACGTGAACTGGGTCGCGAGTTACCCC
GGCCCTTGCCAACACCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein; Secreted Pentapeptide Repeats Protein; Pentapeptide Repeat Family Protein

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MFARLLGFAAAVLLLLLPLQPSWAIMNHSQQVLVNADFSNQDLRGDTFNLANLREANLSGSDLEGSTLFGAKLHDANLSN
TNLRDSTLDSAIFDGTDLTNAVLEDAFAFNTRFKNVTITGADFTNVPLRGDALTTLCEVAEGTNPITGRNTADSLGCS

Sequences:

>Translated_158_residues
MFARLLGFAAAVLLLLLPLQPSWAIMNHSQQVLVNADFSNQDLRGDTFNLANLREANLSGSDLEGSTLFGAKLHDANLSN
TNLRDSTLDSAIFDGTDLTNAVLEDAFAFNTRFKNVTITGADFTNVPLRGDALTTLCEVAEGTNPITGRNTADSLGCS
>Mature_158_residues
MFARLLGFAAAVLLLLLPLQPSWAIMNHSQQVLVNADFSNQDLRGDTFNLANLREANLSGSDLEGSTLFGAKLHDANLSN
TNLRDSTLDSAIFDGTDLTNAVLEDAFAFNTRFKNVTITGADFTNVPLRGDALTTLCEVAEGTNPITGRNTADSLGCS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16880; Mature: 16880

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFARLLGFAAAVLLLLLPLQPSWAIMNHSQQVLVNADFSNQDLRGDTFNLANLREANLSG
CHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCCEECCCCCEECCCCC
SDLEGSTLFGAKLHDANLSNTNLRDSTLDSAIFDGTDLTNAVLEDAFAFNTRFKNVTITG
CCCCCCEEECEEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEC
ADFTNVPLRGDALTTLCEVAEGTNPITGRNTADSLGCS
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFARLLGFAAAVLLLLLPLQPSWAIMNHSQQVLVNADFSNQDLRGDTFNLANLREANLSG
CHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCCEECCCCCEECCCCC
SDLEGSTLFGAKLHDANLSNTNLRDSTLDSAIFDGTDLTNAVLEDAFAFNTRFKNVTITG
CCCCCCEEECEEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEC
ADFTNVPLRGDALTTLCEVAEGTNPITGRNTADSLGCS
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA