| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is pspE
Identifier: 124023310
GI number: 124023310
Start: 1411247
End: 1411600
Strand: Direct
Name: pspE
Synonym: P9303_16081
Alternate gene names: NA
Gene position: 1411247-1411600 (Clockwise)
Preceding gene: 124023307
Following gene: 124023311
Centisome position: 52.61
GC content: 49.72
Gene sequence:
>354_bases ATGAATCAGCCCACTCCAACCTCTATTTCTGCAAAGGATCTGCATCGCTGGTTGAGCGACTCATCCTCTCTGCCAATCTG TGTGGATGTGAGAGAAGACCAGGAGCTTGAGTTAGCCCCCTTCCCAGCCGATGTATTGCATTTGCCACTGAGTCGATCTT CTGATTGGATGGAAACTCTACCTAAGCTATTACCAAATGACCGGCCTGTCGTCGTGATTTGCCATGCTGGCATACGCAGT TGGAACTTCGGGAGCTGGCTTTTAGAGCAGGATAATGATTATCAGGTCTGGAATCTAGAAGGCGGAATCGACGCTTGGAG CATCAATGTCGACTCAAGCGTGCCCCGCTATTAA
Upstream 100 bases:
>100_bases ATTGAACATCACCAAGTGGCTTGTGTCTCCACCTGGACAGCAGCCGCCATGGATGGGCCAAGGTCAAGCCTAAATACAAT CTAAATCAGGACACTTAACG
Downstream 100 bases:
>100_bases GCAAGGATTCAAAACACATGCAAAGCACCAGATTGATCTAAAACTAAGCCGACATTGATTCTAATGTAGAATTCAACTAA AGAATTGTCAGCTTGCTCGA
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese-Related Sulfurtransferase; Rhodanese Domain-Containing Protein; Rhodanese Domain Protein; Molybdopterin Biosynthesis MoeB Protein; Rhodanese Family Protein
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MNQPTPTSISAKDLHRWLSDSSSLPICVDVREDQELELAPFPADVLHLPLSRSSDWMETLPKLLPNDRPVVVICHAGIRS WNFGSWLLEQDNDYQVWNLEGGIDAWSINVDSSVPRY
Sequences:
>Translated_117_residues MNQPTPTSISAKDLHRWLSDSSSLPICVDVREDQELELAPFPADVLHLPLSRSSDWMETLPKLLPNDRPVVVICHAGIRS WNFGSWLLEQDNDYQVWNLEGGIDAWSINVDSSVPRY >Mature_117_residues MNQPTPTSISAKDLHRWLSDSSSLPICVDVREDQELELAPFPADVLHLPLSRSSDWMETLPKLLPNDRPVVVICHAGIRS WNFGSWLLEQDNDYQVWNLEGGIDAWSINVDSSVPRY
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13300; Mature: 13300
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQPTPTSISAKDLHRWLSDSSSLPICVDVREDQELELAPFPADVLHLPLSRSSDWMETL CCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCEEECCCCHHHEECCCCCCCHHHHHH PKLLPNDRPVVVICHAGIRSWNFGSWLLEQDNDYQVWNLEGGIDAWSINVDSSVPRY HHHCCCCCCEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCC >Mature Secondary Structure MNQPTPTSISAKDLHRWLSDSSSLPICVDVREDQELELAPFPADVLHLPLSRSSDWMETL CCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCEEECCCCHHHEECCCCCCCHHHHHH PKLLPNDRPVVVICHAGIRSWNFGSWLLEQDNDYQVWNLEGGIDAWSINVDSSVPRY HHHCCCCCCEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA