| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023203
Identifier: 124023203
GI number: 124023203
Start: 1302576
End: 1303091
Strand: Reverse
Name: 124023203
Synonym: P9303_14991
Alternate gene names: NA
Gene position: 1303091-1302576 (Counterclockwise)
Preceding gene: 124023204
Following gene: 124023202
Centisome position: 48.57
GC content: 52.52
Gene sequence:
>516_bases ATGAGTCGCCCAACCCTTTTGAAACAATTCACCCCTATTGATGGGATTGCCACAATCGTGGCACTCATCGCTCTGGGGGG GGTGTTGTGGAGTCCGAAGTTAAGTCATTCATTGGCCAGGGCGACAGGCCTCATGAGGCCTGTGCAGGTTTCTGTCGATG TTCGCAACGTGCCTACAGCTGAGCCCAATGCACTGATCGAAGCGGCCTTGGCCCAGGGCAGCACCAGTATCGTTATTCGC AATCAGCCTGCCGGTTCACTGAAACTTAAGGGCATCGAAGACCTCAGAAGCAAGCTCGTGGCTGTCCAGCCAGACGGCTC TGTCGTCATCGCAACAGATCCCAATTTGGCTGCCAACAGTATTCTTGATGCTCGCTTCATACTTGAAGGTGACGGCACAG TCTCCAAGACGGGAGTTGTGTTAGCTGGAACAAAACTCAAAATTGGCACACCAGTTGAGCTAGAGGGATCCACCTATCGA ATTAACGGAACCGTGAGTGGTGTCAGTGTTCAATGA
Upstream 100 bases:
>100_bases GACAACAGTAATCAGTTCATTGTTTGCATCGCTTGAGAGACCAATGTTTGACTTGATCAATCGGATCGGTCTCCGTATGG TGCAGCTCTGAAGAGTTTTT
Downstream 100 bases:
>100_bases AGATTATCCCTGCAAGTTTCCAGATCACTAAGAGAACCCATTCTCAATTGTTAATCCGAATTCTTGGAGCTGGGGGAATC CTGATCGGTTCTAATGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSRPTLLKQFTPIDGIATIVALIALGGVLWSPKLSHSLARATGLMRPVQVSVDVRNVPTAEPNALIEAALAQGSTSIVIR NQPAGSLKLKGIEDLRSKLVAVQPDGSVVIATDPNLAANSILDARFILEGDGTVSKTGVVLAGTKLKIGTPVELEGSTYR INGTVSGVSVQ
Sequences:
>Translated_171_residues MSRPTLLKQFTPIDGIATIVALIALGGVLWSPKLSHSLARATGLMRPVQVSVDVRNVPTAEPNALIEAALAQGSTSIVIR NQPAGSLKLKGIEDLRSKLVAVQPDGSVVIATDPNLAANSILDARFILEGDGTVSKTGVVLAGTKLKIGTPVELEGSTYR INGTVSGVSVQ >Mature_170_residues SRPTLLKQFTPIDGIATIVALIALGGVLWSPKLSHSLARATGLMRPVQVSVDVRNVPTAEPNALIEAALAQGSTSIVIRN QPAGSLKLKGIEDLRSKLVAVQPDGSVVIATDPNLAANSILDARFILEGDGTVSKTGVVLAGTKLKIGTPVELEGSTYRI NGTVSGVSVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17701; Mature: 17570
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPTLLKQFTPIDGIATIVALIALGGVLWSPKLSHSLARATGLMRPVQVSVDVRNVPTA CCCCCCHHHCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCEEEEEEEECCCCCC EPNALIEAALAQGSTSIVIRNQPAGSLKLKGIEDLRSKLVAVQPDGSVVIATDPNLAANS CCHHHHHHHHHCCCEEEEEECCCCCCEEECCHHHHHCCEEEECCCCCEEEEECCCCCHHC ILDARFILEGDGTVSKTGVVLAGTKLKIGTPVELEGSTYRINGTVSGVSVQ EEEEEEEEECCCCCCCCCEEEECCEEECCCCEEECCCEEEEEEEEECEEEC >Mature Secondary Structure SRPTLLKQFTPIDGIATIVALIALGGVLWSPKLSHSLARATGLMRPVQVSVDVRNVPTA CCCCCHHHCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCEEEEEEEECCCCCC EPNALIEAALAQGSTSIVIRNQPAGSLKLKGIEDLRSKLVAVQPDGSVVIATDPNLAANS CCHHHHHHHHHCCCEEEEEECCCCCCEEECCHHHHHCCEEEECCCCCEEEEECCCCCHHC ILDARFILEGDGTVSKTGVVLAGTKLKIGTPVELEGSTYRINGTVSGVSVQ EEEEEEEEECCCCCCCCCEEEECCEEECCCCEEECCCEEEEEEEEECEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA