| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is rpmG
Identifier: 124023183
GI number: 124023183
Start: 1274396
End: 1274596
Strand: Reverse
Name: rpmG
Synonym: P9303_14791
Alternate gene names: 124023183
Gene position: 1274596-1274396 (Counterclockwise)
Preceding gene: 124023185
Following gene: 124023182
Centisome position: 47.51
GC content: 51.74
Gene sequence:
>201_bases ATGGCCAAAAACAAGGGCGTCCGGATCGTGATCACTCTTGAGTGCAACGAATGCCGGTCCAATCCCGCCATCGACAAGCG GTCTCACGGGGTGTCCCGATACACCACCGAAAAGAACCGCCGAAACACCACCGAACGGCTGGAAATCAAGAAATTCTGCC GTTACTGCAACAAGTCAACAACTCACAAAGAGATCAAATGA
Upstream 100 bases:
>100_bases ATCTTACGAAGCAAGCGAACGAAGGCGTCAAGTCATGTGAGGCTGCCCTGTAGGATCTTAGTTCTTCACTACGCTTCGCA TCTGCGGCGCAACGTCCTTT
Downstream 100 bases:
>100_bases CTTTGCAGTCACGAAAAGCACACCAGCGTTCTTAAATCATGTCCAGTTCATTTTTTAAAAAGCGGCTGTCGCCAATTAAG CCTGGCGATCCCATCGACTA
Product: 50S ribosomal protein L33
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MAKNKGVRIVITLECNECRSNPAIDKRSHGVSRYTTEKNRRNTTERLEIKKFCRYCNKSTTHKEIK
Sequences:
>Translated_66_residues MAKNKGVRIVITLECNECRSNPAIDKRSHGVSRYTTEKNRRNTTERLEIKKFCRYCNKSTTHKEIK >Mature_65_residues AKNKGVRIVITLECNECRSNPAIDKRSHGVSRYTTEKNRRNTTERLEIKKFCRYCNKSTTHKEIK
Specific function: Unknown
COG id: COG0267
COG function: function code J; Ribosomal protein L33
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L33P family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RL33_PROM3 (A2C9R5)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001017490.1 - ProteinModelPortal: A2C9R5 - SMR: A2C9R5 - STRING: A2C9R5 - GeneID: 4777299 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_14791 - eggNOG: COG0267 - HOGENOM: HBG751058 - OMA: RIVITLE - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_00294 - InterPro: IPR001705 - InterPro: IPR018264 - InterPro: IPR011332 - TIGRFAMs: TIGR01023
Pfam domain/function: PF00471 Ribosomal_L33; SSF57829 Ribosomal_zn-bd
EC number: NA
Molecular weight: Translated: 7786; Mature: 7655
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: PS00582 RIBOSOMAL_L33
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNKGVRIVITLECNECRSNPAIDKRSHGVSRYTTEKNRRNTTERLEIKKFCRYCNKST CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC THKEIK CCCCCC >Mature Secondary Structure AKNKGVRIVITLECNECRSNPAIDKRSHGVSRYTTEKNRRNTTERLEIKKFCRYCNKST CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC THKEIK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA