Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is rpmG

Identifier: 124023183

GI number: 124023183

Start: 1274396

End: 1274596

Strand: Reverse

Name: rpmG

Synonym: P9303_14791

Alternate gene names: 124023183

Gene position: 1274596-1274396 (Counterclockwise)

Preceding gene: 124023185

Following gene: 124023182

Centisome position: 47.51

GC content: 51.74

Gene sequence:

>201_bases
ATGGCCAAAAACAAGGGCGTCCGGATCGTGATCACTCTTGAGTGCAACGAATGCCGGTCCAATCCCGCCATCGACAAGCG
GTCTCACGGGGTGTCCCGATACACCACCGAAAAGAACCGCCGAAACACCACCGAACGGCTGGAAATCAAGAAATTCTGCC
GTTACTGCAACAAGTCAACAACTCACAAAGAGATCAAATGA

Upstream 100 bases:

>100_bases
ATCTTACGAAGCAAGCGAACGAAGGCGTCAAGTCATGTGAGGCTGCCCTGTAGGATCTTAGTTCTTCACTACGCTTCGCA
TCTGCGGCGCAACGTCCTTT

Downstream 100 bases:

>100_bases
CTTTGCAGTCACGAAAAGCACACCAGCGTTCTTAAATCATGTCCAGTTCATTTTTTAAAAAGCGGCTGTCGCCAATTAAG
CCTGGCGATCCCATCGACTA

Product: 50S ribosomal protein L33

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MAKNKGVRIVITLECNECRSNPAIDKRSHGVSRYTTEKNRRNTTERLEIKKFCRYCNKSTTHKEIK

Sequences:

>Translated_66_residues
MAKNKGVRIVITLECNECRSNPAIDKRSHGVSRYTTEKNRRNTTERLEIKKFCRYCNKSTTHKEIK
>Mature_65_residues
AKNKGVRIVITLECNECRSNPAIDKRSHGVSRYTTEKNRRNTTERLEIKKFCRYCNKSTTHKEIK

Specific function: Unknown

COG id: COG0267

COG function: function code J; Ribosomal protein L33

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L33P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL33_PROM3 (A2C9R5)

Other databases:

- EMBL:   CP000554
- RefSeq:   YP_001017490.1
- ProteinModelPortal:   A2C9R5
- SMR:   A2C9R5
- STRING:   A2C9R5
- GeneID:   4777299
- GenomeReviews:   CP000554_GR
- KEGG:   pmf:P9303_14791
- eggNOG:   COG0267
- HOGENOM:   HBG751058
- OMA:   RIVITLE
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00294
- InterPro:   IPR001705
- InterPro:   IPR018264
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01023

Pfam domain/function: PF00471 Ribosomal_L33; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 7786; Mature: 7655

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS00582 RIBOSOMAL_L33

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNKGVRIVITLECNECRSNPAIDKRSHGVSRYTTEKNRRNTTERLEIKKFCRYCNKST
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
THKEIK
CCCCCC
>Mature Secondary Structure 
AKNKGVRIVITLECNECRSNPAIDKRSHGVSRYTTEKNRRNTTERLEIKKFCRYCNKST
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
THKEIK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA