| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023174
Identifier: 124023174
GI number: 124023174
Start: 1265000
End: 1265683
Strand: Reverse
Name: 124023174
Synonym: P9303_14701
Alternate gene names: NA
Gene position: 1265683-1265000 (Counterclockwise)
Preceding gene: 124023175
Following gene: 124023173
Centisome position: 47.18
GC content: 48.83
Gene sequence:
>684_bases ATGCCTGTTCTGAGATCAAGCCGCTTTCTCGGTGTTCTGATCAGCATCCTCCTGGGTCTGATTCTCCTTGTACCAGGAGC CTTTGCCATAACAACAGAAGATTTACCTGTTGCAAGGCCTGAAGGCCATGTTGTCGACTCTGCTGATGTCCTCAGCAGAG TGTCTCGTTCTCAGATTGAAGGACGTCTTGTTGAGCTCGGGAACGAAAGACTTGATGCTCGCTTGATTACTCTTCGTAAA CTTGATTATGGTGTTTCACTTTCCAGCTTCGGCAGTTCGCTGATCGATCGATGGTCCACAAACGCTGGAGAAAAAGAGCT GCCCCTGCTAGTGATGTTGATAGATGCACAAACCAAGCAAACCGTTGTCTTGGCAGATACAAGTTTAAGAAGCACATTAC CGGACGCCCTTTTGCAGAGCACTGGCCGTACGACAATGAATAAGCCAGTGGTGGGAGGAGAGCGCTACCAGCAAGCATCC TTTGATGCAATTGCTCGCTTACAAGTTGTATTGGATGGAGGGGAGGACCCAGGACCTCCTATAGAAGCGTTTAGCGCAAT TAAGCAAACCAATATCCCATCACAAGAACAAACACAAAGTAGTAATGCAACCCTAGTGGTCGTTGTCTTGATGGTTGTCG GCACCATCGTTCCGATGGCCACTTGGTGGGTGTTCTCTCGCTGA
Upstream 100 bases:
>100_bases TTCTGAGCGAGCAAGGATTGTGATTCAAGCAATTTCTGCTCTGAATCGAGACAGCTTGCTCAGCTGACGGCAGACTGCAA TATGAGCTGTTGTTGAACTG
Downstream 100 bases:
>100_bases GTCAATCACCATGACGCTTAGGGACTGGATGAGAACATTTGGGGAAGCTCGATCGATAGACATCAATAATGACCTTGAAC GTGGTTACGAAGCAGCACTT
Product: beta-propeller domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MPVLRSSRFLGVLISILLGLILLVPGAFAITTEDLPVARPEGHVVDSADVLSRVSRSQIEGRLVELGNERLDARLITLRK LDYGVSLSSFGSSLIDRWSTNAGEKELPLLVMLIDAQTKQTVVLADTSLRSTLPDALLQSTGRTTMNKPVVGGERYQQAS FDAIARLQVVLDGGEDPGPPIEAFSAIKQTNIPSQEQTQSSNATLVVVVLMVVGTIVPMATWWVFSR
Sequences:
>Translated_227_residues MPVLRSSRFLGVLISILLGLILLVPGAFAITTEDLPVARPEGHVVDSADVLSRVSRSQIEGRLVELGNERLDARLITLRK LDYGVSLSSFGSSLIDRWSTNAGEKELPLLVMLIDAQTKQTVVLADTSLRSTLPDALLQSTGRTTMNKPVVGGERYQQAS FDAIARLQVVLDGGEDPGPPIEAFSAIKQTNIPSQEQTQSSNATLVVVVLMVVGTIVPMATWWVFSR >Mature_226_residues PVLRSSRFLGVLISILLGLILLVPGAFAITTEDLPVARPEGHVVDSADVLSRVSRSQIEGRLVELGNERLDARLITLRKL DYGVSLSSFGSSLIDRWSTNAGEKELPLLVMLIDAQTKQTVVLADTSLRSTLPDALLQSTGRTTMNKPVVGGERYQQASF DAIARLQVVLDGGEDPGPPIEAFSAIKQTNIPSQEQTQSSNATLVVVVLMVVGTIVPMATWWVFSR
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24551; Mature: 24420
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLRSSRFLGVLISILLGLILLVPGAFAITTEDLPVARPEGHVVDSADVLSRVSRSQIE CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEECHHHHHHHHHHHHHH GRLVELGNERLDARLITLRKLDYGVSLSSFGSSLIDRWSTNAGEKELPLLVMLIDAQTKQ HHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC TVVLADTSLRSTLPDALLQSTGRTTMNKPVVGGERYQQASFDAIARLQVVLDGGEDPGPP EEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCH IEAFSAIKQTNIPSQEQTQSSNATLVVVVLMVVGTIVPMATWWVFSR HHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PVLRSSRFLGVLISILLGLILLVPGAFAITTEDLPVARPEGHVVDSADVLSRVSRSQIE CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEECHHHHHHHHHHHHHH GRLVELGNERLDARLITLRKLDYGVSLSSFGSSLIDRWSTNAGEKELPLLVMLIDAQTKQ HHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC TVVLADTSLRSTLPDALLQSTGRTTMNKPVVGGERYQQASFDAIARLQVVLDGGEDPGPP EEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCH IEAFSAIKQTNIPSQEQTQSSNATLVVVVLMVVGTIVPMATWWVFSR HHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA