| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124023154
Identifier: 124023154
GI number: 124023154
Start: 1247379
End: 1247753
Strand: Reverse
Name: 124023154
Synonym: P9303_14501
Alternate gene names: NA
Gene position: 1247753-1247379 (Counterclockwise)
Preceding gene: 124023155
Following gene: 124023153
Centisome position: 46.51
GC content: 49.87
Gene sequence:
>375_bases ATGAGCCATGCCTGGAAGAAGTGGCAATGCATACAAAATTGCGGAGCCTGCTGCCGTCTAGATCCCACTGAGCGAGGAGA AGCTATCGCAGTACTCAATGAAAGGCAGCAAGAGATTTATTTAGGGATGGTCAACCCCGACGGCTGGTGCAAGCATTACG ACACTGGTGGACGTCGTTGTCGCATCTACAACTCCCGCCCTGATTTCTGCAGGGTTGGTTTACTGGCATCACTTTTCAAT CTGCCGCAGGACAAATCAGAATCATTTGCAATCCAATGCTGCCGCCAGCAGATTCGATCTGTCTATGGCGGTAGAAGCCG AGAGCTACGAAATTTTGAACGTAGCCTGCGCCTGCCATTTCAAAAAGATGGTTAA
Upstream 100 bases:
>100_bases CTTAGAGATGATCCCTTTTGACTGGTAGAGAATACGAGATTGCGGTCACATAAAGTGTGACTGATCTTCGACTCTGTGAT GCCTTGTCACAGCATGAAGG
Downstream 100 bases:
>100_bases GGCACCAACTTCGAATGACACAATTCAAAAACCCGCTCCTGAGAACGGAGCAATGGGTTTCACAACAGTGTTGTTAACGA CATTCACCACAGTCTTTTTG
Product: Fe-S-cluster oxidoreductase
Products: NA
Alternate protein names: Fe-S-Cluster Oxidoreductase; Fe-S-Cluster Oxidoreductase-Like
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSHAWKKWQCIQNCGACCRLDPTERGEAIAVLNERQQEIYLGMVNPDGWCKHYDTGGRRCRIYNSRPDFCRVGLLASLFN LPQDKSESFAIQCCRQQIRSVYGGRSRELRNFERSLRLPFQKDG
Sequences:
>Translated_124_residues MSHAWKKWQCIQNCGACCRLDPTERGEAIAVLNERQQEIYLGMVNPDGWCKHYDTGGRRCRIYNSRPDFCRVGLLASLFN LPQDKSESFAIQCCRQQIRSVYGGRSRELRNFERSLRLPFQKDG >Mature_123_residues SHAWKKWQCIQNCGACCRLDPTERGEAIAVLNERQQEIYLGMVNPDGWCKHYDTGGRRCRIYNSRPDFCRVGLLASLFNL PQDKSESFAIQCCRQQIRSVYGGRSRELRNFERSLRLPFQKDG
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14435; Mature: 14303
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 7.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHAWKKWQCIQNCGACCRLDPTERGEAIAVLNERQQEIYLGMVNPDGWCKHYDTGGRRC CCCCHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCCEEEEEEECCCCCEECCCCCCCEE RIYNSRPDFCRVGLLASLFNLPQDKSESFAIQCCRQQIRSVYGGRSRELRNFERSLRLPF EEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC QKDG CCCC >Mature Secondary Structure SHAWKKWQCIQNCGACCRLDPTERGEAIAVLNERQQEIYLGMVNPDGWCKHYDTGGRRC CCCHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCCEEEEEEECCCCCEECCCCCCCEE RIYNSRPDFCRVGLLASLFNLPQDKSESFAIQCCRQQIRSVYGGRSRELRNFERSLRLPF EEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC QKDG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA