| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022964
Identifier: 124022964
GI number: 124022964
Start: 1084726
End: 1085463
Strand: Direct
Name: 124022964
Synonym: P9303_12591
Alternate gene names: NA
Gene position: 1084726-1085463 (Clockwise)
Preceding gene: 124022963
Following gene: 124022965
Centisome position: 40.43
GC content: 51.08
Gene sequence:
>738_bases ATGAACCGTTCATCTCGTCAGCAACCCTGCCCGTGCTGTGGTCGCAATGCCAATGGCAACTGCCGTTGGTCTGATGATCT GATCCTTTGTTTTCAAGGTGATCGCTTTGCCCCGCCTTCTGATCTAGAGATCGGTGACACCATCACTATCGATGGCGAGC CCTGGGCATTACTTCGCCGTGATGGTGGCTTCAGCGGCATGGCAGCCGTATTCAGGCCACATAAACCAAGACAACCGGGC GAAAAGGATTATTCCCGTCGTCCGCGTCCCAATCAAAAACTCCTTTCACTTCAAGCAAAACGTTCTCAATGGGCTGATGC CATTGAACAGTTCCACGATGCCTTTCAGCTCGCATGGAATATCCCGGACTTCTATAGCTGCACACCTGATCAACTCAAAG CGGCTGAACAGGTCATCAACGATGCACAAGCTCGTGGCGCTGCTCTTAGACCCCATCTGCGTCAGATCTGGAGAGAACAT CCCGGCCTAGATCAACTTCATCGCTTACGCATAGATAGTCAGCTCAAATCCCTCGCCTATATCGCAGAACATTTCCGGTA CTTCCAAATCAATGAACTTGTTACCTCTCGCCCGGCGGCTGTTGATTTAGCAGGGGACGGTGATGGTGGAAGTTGCTTTA CCGCCATGAATAAAGGTGATGGATTTCATCAGCTGTCCGTTTTGGGTGAAGTAGGAGATCCAGGTGCCGTTAGTGAAAGG CATGAGTCAGGTAGTTAG
Upstream 100 bases:
>100_bases TTCAGCGAACGATTGAAGCGACGCAAAAAGAAGACGCTCAACGTGAGGCGCGACTGAAAAACAAGCAAGAAAAAGTCGAG ACCTATGAGGAGGGGGAGGC
Downstream 100 bases:
>100_bases TACGACCAGGTTAAGTTGACTGAGCAGACCTTGTAGACGTATGGAGAGCAAAGTCTCAGAAGGGATCGAAAGGTTACGGG AAGAGATGCTGGTGTTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MNRSSRQQPCPCCGRNANGNCRWSDDLILCFQGDRFAPPSDLEIGDTITIDGEPWALLRRDGGFSGMAAVFRPHKPRQPG EKDYSRRPRPNQKLLSLQAKRSQWADAIEQFHDAFQLAWNIPDFYSCTPDQLKAAEQVINDAQARGAALRPHLRQIWREH PGLDQLHRLRIDSQLKSLAYIAEHFRYFQINELVTSRPAAVDLAGDGDGGSCFTAMNKGDGFHQLSVLGEVGDPGAVSER HESGS
Sequences:
>Translated_245_residues MNRSSRQQPCPCCGRNANGNCRWSDDLILCFQGDRFAPPSDLEIGDTITIDGEPWALLRRDGGFSGMAAVFRPHKPRQPG EKDYSRRPRPNQKLLSLQAKRSQWADAIEQFHDAFQLAWNIPDFYSCTPDQLKAAEQVINDAQARGAALRPHLRQIWREH PGLDQLHRLRIDSQLKSLAYIAEHFRYFQINELVTSRPAAVDLAGDGDGGSCFTAMNKGDGFHQLSVLGEVGDPGAVSER HESGS >Mature_245_residues MNRSSRQQPCPCCGRNANGNCRWSDDLILCFQGDRFAPPSDLEIGDTITIDGEPWALLRRDGGFSGMAAVFRPHKPRQPG EKDYSRRPRPNQKLLSLQAKRSQWADAIEQFHDAFQLAWNIPDFYSCTPDQLKAAEQVINDAQARGAALRPHLRQIWREH PGLDQLHRLRIDSQLKSLAYIAEHFRYFQINELVTSRPAAVDLAGDGDGGSCFTAMNKGDGFHQLSVLGEVGDPGAVSER HESGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27382; Mature: 27382
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSSRQQPCPCCGRNANGNCRWSDDLILCFQGDRFAPPSDLEIGDTITIDGEPWALLRR CCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEE DGGFSGMAAVFRPHKPRQPGEKDYSRRPRPNQKLLSLQAKRSQWADAIEQFHDAFQLAWN CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IPDFYSCTPDQLKAAEQVINDAQARGAALRPHLRQIWREHPGLDQLHRLRIDSQLKSLAY CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH IAEHFRYFQINELVTSRPAAVDLAGDGDGGSCFTAMNKGDGFHQLSVLGEVGDPGAVSER HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCC HESGS CCCCC >Mature Secondary Structure MNRSSRQQPCPCCGRNANGNCRWSDDLILCFQGDRFAPPSDLEIGDTITIDGEPWALLRR CCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEE DGGFSGMAAVFRPHKPRQPGEKDYSRRPRPNQKLLSLQAKRSQWADAIEQFHDAFQLAWN CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IPDFYSCTPDQLKAAEQVINDAQARGAALRPHLRQIWREHPGLDQLHRLRIDSQLKSLAY CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH IAEHFRYFQINELVTSRPAAVDLAGDGDGGSCFTAMNKGDGFHQLSVLGEVGDPGAVSER HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCC HESGS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA