Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124022964

Identifier: 124022964

GI number: 124022964

Start: 1084726

End: 1085463

Strand: Direct

Name: 124022964

Synonym: P9303_12591

Alternate gene names: NA

Gene position: 1084726-1085463 (Clockwise)

Preceding gene: 124022963

Following gene: 124022965

Centisome position: 40.43

GC content: 51.08

Gene sequence:

>738_bases
ATGAACCGTTCATCTCGTCAGCAACCCTGCCCGTGCTGTGGTCGCAATGCCAATGGCAACTGCCGTTGGTCTGATGATCT
GATCCTTTGTTTTCAAGGTGATCGCTTTGCCCCGCCTTCTGATCTAGAGATCGGTGACACCATCACTATCGATGGCGAGC
CCTGGGCATTACTTCGCCGTGATGGTGGCTTCAGCGGCATGGCAGCCGTATTCAGGCCACATAAACCAAGACAACCGGGC
GAAAAGGATTATTCCCGTCGTCCGCGTCCCAATCAAAAACTCCTTTCACTTCAAGCAAAACGTTCTCAATGGGCTGATGC
CATTGAACAGTTCCACGATGCCTTTCAGCTCGCATGGAATATCCCGGACTTCTATAGCTGCACACCTGATCAACTCAAAG
CGGCTGAACAGGTCATCAACGATGCACAAGCTCGTGGCGCTGCTCTTAGACCCCATCTGCGTCAGATCTGGAGAGAACAT
CCCGGCCTAGATCAACTTCATCGCTTACGCATAGATAGTCAGCTCAAATCCCTCGCCTATATCGCAGAACATTTCCGGTA
CTTCCAAATCAATGAACTTGTTACCTCTCGCCCGGCGGCTGTTGATTTAGCAGGGGACGGTGATGGTGGAAGTTGCTTTA
CCGCCATGAATAAAGGTGATGGATTTCATCAGCTGTCCGTTTTGGGTGAAGTAGGAGATCCAGGTGCCGTTAGTGAAAGG
CATGAGTCAGGTAGTTAG

Upstream 100 bases:

>100_bases
TTCAGCGAACGATTGAAGCGACGCAAAAAGAAGACGCTCAACGTGAGGCGCGACTGAAAAACAAGCAAGAAAAAGTCGAG
ACCTATGAGGAGGGGGAGGC

Downstream 100 bases:

>100_bases
TACGACCAGGTTAAGTTGACTGAGCAGACCTTGTAGACGTATGGAGAGCAAAGTCTCAGAAGGGATCGAAAGGTTACGGG
AAGAGATGCTGGTGTTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MNRSSRQQPCPCCGRNANGNCRWSDDLILCFQGDRFAPPSDLEIGDTITIDGEPWALLRRDGGFSGMAAVFRPHKPRQPG
EKDYSRRPRPNQKLLSLQAKRSQWADAIEQFHDAFQLAWNIPDFYSCTPDQLKAAEQVINDAQARGAALRPHLRQIWREH
PGLDQLHRLRIDSQLKSLAYIAEHFRYFQINELVTSRPAAVDLAGDGDGGSCFTAMNKGDGFHQLSVLGEVGDPGAVSER
HESGS

Sequences:

>Translated_245_residues
MNRSSRQQPCPCCGRNANGNCRWSDDLILCFQGDRFAPPSDLEIGDTITIDGEPWALLRRDGGFSGMAAVFRPHKPRQPG
EKDYSRRPRPNQKLLSLQAKRSQWADAIEQFHDAFQLAWNIPDFYSCTPDQLKAAEQVINDAQARGAALRPHLRQIWREH
PGLDQLHRLRIDSQLKSLAYIAEHFRYFQINELVTSRPAAVDLAGDGDGGSCFTAMNKGDGFHQLSVLGEVGDPGAVSER
HESGS
>Mature_245_residues
MNRSSRQQPCPCCGRNANGNCRWSDDLILCFQGDRFAPPSDLEIGDTITIDGEPWALLRRDGGFSGMAAVFRPHKPRQPG
EKDYSRRPRPNQKLLSLQAKRSQWADAIEQFHDAFQLAWNIPDFYSCTPDQLKAAEQVINDAQARGAALRPHLRQIWREH
PGLDQLHRLRIDSQLKSLAYIAEHFRYFQINELVTSRPAAVDLAGDGDGGSCFTAMNKGDGFHQLSVLGEVGDPGAVSER
HESGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27382; Mature: 27382

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSSRQQPCPCCGRNANGNCRWSDDLILCFQGDRFAPPSDLEIGDTITIDGEPWALLRR
CCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEE
DGGFSGMAAVFRPHKPRQPGEKDYSRRPRPNQKLLSLQAKRSQWADAIEQFHDAFQLAWN
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IPDFYSCTPDQLKAAEQVINDAQARGAALRPHLRQIWREHPGLDQLHRLRIDSQLKSLAY
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
IAEHFRYFQINELVTSRPAAVDLAGDGDGGSCFTAMNKGDGFHQLSVLGEVGDPGAVSER
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCC
HESGS
CCCCC
>Mature Secondary Structure
MNRSSRQQPCPCCGRNANGNCRWSDDLILCFQGDRFAPPSDLEIGDTITIDGEPWALLRR
CCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEE
DGGFSGMAAVFRPHKPRQPGEKDYSRRPRPNQKLLSLQAKRSQWADAIEQFHDAFQLAWN
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IPDFYSCTPDQLKAAEQVINDAQARGAALRPHLRQIWREHPGLDQLHRLRIDSQLKSLAY
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
IAEHFRYFQINELVTSRPAAVDLAGDGDGGSCFTAMNKGDGFHQLSVLGEVGDPGAVSER
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCC
HESGS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA