| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022963
Identifier: 124022963
GI number: 124022963
Start: 1084247
End: 1084729
Strand: Direct
Name: 124022963
Synonym: P9303_12581
Alternate gene names: NA
Gene position: 1084247-1084729 (Clockwise)
Preceding gene: 124022962
Following gene: 124022964
Centisome position: 40.42
GC content: 54.24
Gene sequence:
>483_bases ATGCCTACCGCGCATCCGCAACGCCAGCAGAAGACTCCCCAGAAATCCGCGCCTACCTCGAACGGATTTGGGGACCACTC AAATACCCAAGCATTAGCGGAGTCCCCTGGACCCCAATCGCAAAAAAACGGATCAACCTCTCAGAGTTTTCTCCAGAGCC ACGTTGATACGTCTGCTCAGCGGGATCATTTCTTCTCCCTAACAGACCCTGTATGGGTGCCGGAGGCTGTTGCAAGTGAA CTGCTTGCAATGAAACCCAGCACTCTTCGCTGCATGCGCCGTGAGCGCAGGTTGCGCCCTGGCATCGATTGGATCTATTC AACCGGCGGCAAGCACAGCAGCGTCCTTTACAACGTGCCTTCCATCATTGAGCTGCTAGTTCAGCGAACGATTGAAGCGA CGCAAAAAGAAGACGCTCAACGTGAGGCGCGACTGAAAAACAAGCAAGAAAAAGTCGAGACCTATGAGGAGGGGGAGGCA TGA
Upstream 100 bases:
>100_bases CTCCTAAGCCACAAGCTTGGAAATCGTTTCTACCGCCTGCAGAAGCAACTGATTGCAACTGAGGGAACACCCTCCGCTGT ATTGCAGCAGGAAGCACGAG
Downstream 100 bases:
>100_bases ACCGTTCATCTCGTCAGCAACCCTGCCCGTGCTGTGGTCGCAATGCCAATGGCAACTGCCGTTGGTCTGATGATCTGATC CTTTGTTTTCAAGGTGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MPTAHPQRQQKTPQKSAPTSNGFGDHSNTQALAESPGPQSQKNGSTSQSFLQSHVDTSAQRDHFFSLTDPVWVPEAVASE LLAMKPSTLRCMRRERRLRPGIDWIYSTGGKHSSVLYNVPSIIELLVQRTIEATQKEDAQREARLKNKQEKVETYEEGEA
Sequences:
>Translated_160_residues MPTAHPQRQQKTPQKSAPTSNGFGDHSNTQALAESPGPQSQKNGSTSQSFLQSHVDTSAQRDHFFSLTDPVWVPEAVASE LLAMKPSTLRCMRRERRLRPGIDWIYSTGGKHSSVLYNVPSIIELLVQRTIEATQKEDAQREARLKNKQEKVETYEEGEA >Mature_159_residues PTAHPQRQQKTPQKSAPTSNGFGDHSNTQALAESPGPQSQKNGSTSQSFLQSHVDTSAQRDHFFSLTDPVWVPEAVASEL LAMKPSTLRCMRRERRLRPGIDWIYSTGGKHSSVLYNVPSIIELLVQRTIEATQKEDAQREARLKNKQEKVETYEEGEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17931; Mature: 17800
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTAHPQRQQKTPQKSAPTSNGFGDHSNTQALAESPGPQSQKNGSTSQSFLQSHVDTSAQ CCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHH RDHFFSLTDPVWVPEAVASELLAMKPSTLRCMRRERRLRPGIDWIYSTGGKHSSVLYNVP HCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHCCHH SIIELLVQRTIEATQKEDAQREARLKNKQEKVETYEEGEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PTAHPQRQQKTPQKSAPTSNGFGDHSNTQALAESPGPQSQKNGSTSQSFLQSHVDTSAQ CCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHH RDHFFSLTDPVWVPEAVASELLAMKPSTLRCMRRERRLRPGIDWIYSTGGKHSSVLYNVP HCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHCCHH SIIELLVQRTIEATQKEDAQREARLKNKQEKVETYEEGEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA