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The map label for this gene is aapJ [H]

Identifier: 124022922

GI number: 124022922

Start: 1057899

End: 1058948

Strand: Reverse

Name: aapJ [H]

Synonym: P9303_12151

Alternate gene names: 124022922

Gene position: 1058948-1057899 (Counterclockwise)

Preceding gene: 124022924

Following gene: 124022921

Centisome position: 39.47

GC content: 50.76

Gene sequence:

>1050_bases
ATGATCAGGCGTTTTGCCACAGGTCTAGTCACTCTGTCTTTGCTTGCCACAGGATGTGCCTCAATTGATCAAGGTGGTGG
TTCTCGGCTGGAATTGATCAGCAAGCGCGGCCAATTGCATTGTGGTGTTAGCGGCAAGATCCCAGGCTTTAGTTTTCTAC
TTGGCAATGGTCGCTATGAAGGGCTAGACGTTGATATCTGCCGCGCTATGGCCGCTGCAGTTGTTGGCGATGCCACGAAA
GTGCAATATCGACCTCTTACAGCTCCCGAACGCTTCACTGCTCTAAAAACAGGCGAAATTGATCTGCTTTCACGTAACAC
CACATTGAATCTCAGTCGGGATGCAGCAGGAGGCAATGGTCTCACCTTTGCACCTGTGGTGTTTCACGATGGCCAGGGGT
TGATGGTCAAGCGAAGTACCGGAATTAAGGGCCTTCAGGATTTGAAAGCCAGCAACATCTGTGTGGGCTCAGGCACCACG
ACGGAACAGAACCTCAACGATGCATTTCAGGAACGAAAGCTTTCTTATACGCCGATTAAGTATCAAGATCTCAATCAAGT
TGTCGCCGGTTACCTCCAGGGTCGATGTCTAGCGATGACTTCCGATCGTTCTCAACTTGCGGCGGCTCGATCTGGTTTTC
CTGATCCTGAGCAGCACATCATTCTTGATGTTGTGCTGAGTAAGGAACCGCTTGCCCCTGCCTCAGTAGGTGGAGACCAG
CGTCTTGGTGATGCCATCCGATGGGTGGTCTTTGCTCTTTTTGCCGCTGAGGAATTTGGTATTACTCAAGAGAATGTCGA
CAGCAAGCTTCAACAAGCCAAGACAAACCCACAGATGTCATCGCTGCGACGCTTTCTAGGCGTTGATGCTGGCCTTGGTC
AAAAGCTTGGTCTGGCAGATGACTTCGTCGTCAAGGTGATCCGAGCCACAGGCAATTATGGAGAGATCTACAACCGCCAC
CTCGGTCCAAACAGTTCTGTGCCAATTCCTAGAGGTCTAAATCGCTCCTATCGGCAAGGTGGCTTACTGATCGCGCCACC
ATTTAACTAA

Upstream 100 bases:

>100_bases
AAGCAATATTTTAGTTGCTGCATTGCGTCAGGTGGCAATCGATTATTCTCAAGCTTTGCCAAAGATCTGAGAGAATAAGG
CTAAATTGCATAGTTACAGC

Downstream 100 bases:

>100_bases
CCTCCCATGAAGCGCTCGCAGCACTTTTGCTTGCAAGTTGGCGTCGCTCTCGCTCTGCTGACCATTCTTGGCGTGTTGAT
CAACAATCTCGCTGTGAATC

Product: amino acid ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MIRRFATGLVTLSLLATGCASIDQGGGSRLELISKRGQLHCGVSGKIPGFSFLLGNGRYEGLDVDICRAMAAAVVGDATK
VQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNGLTFAPVVFHDGQGLMVKRSTGIKGLQDLKASNICVGSGTT
TEQNLNDAFQERKLSYTPIKYQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ
RLGDAIRWVVFALFAAEEFGITQENVDSKLQQAKTNPQMSSLRRFLGVDAGLGQKLGLADDFVVKVIRATGNYGEIYNRH
LGPNSSVPIPRGLNRSYRQGGLLIAPPFN

Sequences:

>Translated_349_residues
MIRRFATGLVTLSLLATGCASIDQGGGSRLELISKRGQLHCGVSGKIPGFSFLLGNGRYEGLDVDICRAMAAAVVGDATK
VQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNGLTFAPVVFHDGQGLMVKRSTGIKGLQDLKASNICVGSGTT
TEQNLNDAFQERKLSYTPIKYQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ
RLGDAIRWVVFALFAAEEFGITQENVDSKLQQAKTNPQMSSLRRFLGVDAGLGQKLGLADDFVVKVIRATGNYGEIYNRH
LGPNSSVPIPRGLNRSYRQGGLLIAPPFN
>Mature_349_residues
MIRRFATGLVTLSLLATGCASIDQGGGSRLELISKRGQLHCGVSGKIPGFSFLLGNGRYEGLDVDICRAMAAAVVGDATK
VQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNGLTFAPVVFHDGQGLMVKRSTGIKGLQDLKASNICVGSGTT
TEQNLNDAFQERKLSYTPIKYQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ
RLGDAIRWVVFALFAAEEFGITQENVDSKLQQAKTNPQMSSLRRFLGVDAGLGQKLGLADDFVVKVIRATGNYGEIYNRH
LGPNSSVPIPRGLNRSYRQGGLLIAPPFN

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=207, Percent_Identity=28.0193236714976, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 37425; Mature: 37425

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRFATGLVTLSLLATGCASIDQGGGSRLELISKRGQLHCGVSGKIPGFSFLLGNGRYE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEECCCCCCCCEEEEECCCCCC
GLDVDICRAMAAAVVGDATKVQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNG
CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHEEEECCCEEEEECCCEEEEECCCCCCCC
LTFAPVVFHDGQGLMVKRSTGIKGLQDLKASNICVGSGTTTEQNLNDAFQERKLSYTPIK
CEEEEEEEECCCCEEEECCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCC
YQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ
HHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCH
RLGDAIRWVVFALFAAEEFGITQENVDSKLQQAKTNPQMSSLRRFLGVDAGLGQKLGLAD
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCH
DFVVKVIRATGNYGEIYNRHLGPNSSVPIPRGLNRSYRQGGLLIAPPFN
HHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEECCCC
>Mature Secondary Structure
MIRRFATGLVTLSLLATGCASIDQGGGSRLELISKRGQLHCGVSGKIPGFSFLLGNGRYE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEECCCCCCCCEEEEECCCCCC
GLDVDICRAMAAAVVGDATKVQYRPLTAPERFTALKTGEIDLLSRNTTLNLSRDAAGGNG
CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHEEEECCCEEEEECCCEEEEECCCCCCCC
LTFAPVVFHDGQGLMVKRSTGIKGLQDLKASNICVGSGTTTEQNLNDAFQERKLSYTPIK
CEEEEEEEECCCCEEEECCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCC
YQDLNQVVAGYLQGRCLAMTSDRSQLAAARSGFPDPEQHIILDVVLSKEPLAPASVGGDQ
HHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCH
RLGDAIRWVVFALFAAEEFGITQENVDSKLQQAKTNPQMSSLRRFLGVDAGLGQKLGLAD
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCH
DFVVKVIRATGNYGEIYNRHLGPNSSVPIPRGLNRSYRQGGLLIAPPFN
HHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]