| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022892
Identifier: 124022892
GI number: 124022892
Start: 1041392
End: 1042837
Strand: Direct
Name: 124022892
Synonym: P9303_11851
Alternate gene names: NA
Gene position: 1041392-1042837 (Clockwise)
Preceding gene: 124022890
Following gene: 124022893
Centisome position: 38.82
GC content: 50.35
Gene sequence:
>1446_bases ATGTCTGCCTTTTCACAACGCATCATTGACCTCATGAAAACGAGCAAAAATGATGTTCTCGAGCTGGTGATCGGTAGCTT CGAACTGAGTAAGATCAAGGCAGGGCAACCAGCGATCGGTAAGGACCAGGTTCTCTACAAGGTTGGGCGTTACGACGGCG TTAACTGGATTCTCGAGGCTGGATATCCGGTGCAGGGACGAACATTCAGTGATGATGAAAAAATGTTTGATGATGTTGCC TACGCCAACGGCCAAAAGGTTGACAACGCAGTGATTGTCAGGGTTGACGATTCAACTCCAGGAAATCCAGACAGCTATTA CGTCTATAACGAGAACTGGGAGAGAGTGGCACCCGGCACCGTGACTAACGGTATGAAAACAGTGGTGATCGGCCCCGACA AAAACCCTTACCTGACTGATGGGCACCACACGCTGAACACTTTTTCACAGATGAAGCGAGGAGGATTCGAAGATTTCAAG ATCAATCTAGTTGTGGAAGCTAATTACTCAAATCTGAAAGACAAGAATAATAACGGCAGTTCCATGGATGAATTCTGGAT AGAAATGGCCAACAGCGGCAACGCCTGGCTCAAGGTTCTCAAAGAAAACGAACCCGGATACCGTTATCTGAATGGTGTGG AAGGAGACCAGGATGAATACATGGTGCACTCCGTGGACCTGGACAGGTTCAAGGGTCAGCTGCCAGAAGAAATGAAACCG GAGGCCTTCAGGAATGACCCCTATCGAGCCATCATGAATTTCACAAGAGGAATCGCATGGGAGGCGCCTGAAGGAACAAA AGCTGATGGATTACCCTTCCTTGAATTTTACTGGGCGGAAGAAATTCAGAATGCCATTGGCGATGGCAATAGCGCTCTTG ATGTTCATACTGAGGCCTCTCCATACAACCTCTCTAATCTCGACAGTTATGTCTCGGCAGTGCAGGAGATCTCCAACTGG ATCATCAATCTTGACCCGGATACCATCATCGGCACCAGTGTTTTTACAGCCAGGGAGATGGGCCAGAAAACTGAGATCGA TGAAGGGAAATTAAACAGCCTGATCGATTCCGGCAAGACGCTCGAAGCCTCATCATCCGATGAAAAAGACGCCGTCGATG TGCCCAGTTTCGGAAAACTCGGCTACGCCTGGGCGCAACGGAACGGAGGAAGCGAAGGCAACGACAGGCTCACGGGCCTT CCCGGACCAGACCTCTTCGTACTGTCACCCGGAAACGATGTGATAAGTGATTTCCGCATCGGCGAGGATTCCATCAGCGT TGCGGGAACTCCTGACCTGCGCTTCAGACAGACAGGAGAGGGACTGTTGATCAGTGCCGGAGACGATATCCACACCCTGC TTCTGAATGTGCACAGGGATGCGTTTCTGGCTCATGAACCGGCCCATCTGCATATCATTCCAGCCCAGGACGACAACCTG ATCTGA
Upstream 100 bases:
>100_bases CAGGCTGTTCATTCTGACAAGACTGGTCAAAGGCGAGGCTGTTAAAAGTGATTAGGCCTGCAAAGCAGCCATGGCTATTA TTTCTAATAAATCATAAAAA
Downstream 100 bases:
>100_bases TCTTTACTGTCCTGCTGAAGGCACAGATCAGATCATTCGCTGCAGTTCCGAGTTGATGATTCAGGGCCCGAAGCACACGT CGTCATGATGTCGTCGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MSAFSQRIIDLMKTSKNDVLELVIGSFELSKIKAGQPAIGKDQVLYKVGRYDGVNWILEAGYPVQGRTFSDDEKMFDDVA YANGQKVDNAVIVRVDDSTPGNPDSYYVYNENWERVAPGTVTNGMKTVVIGPDKNPYLTDGHHTLNTFSQMKRGGFEDFK INLVVEANYSNLKDKNNNGSSMDEFWIEMANSGNAWLKVLKENEPGYRYLNGVEGDQDEYMVHSVDLDRFKGQLPEEMKP EAFRNDPYRAIMNFTRGIAWEAPEGTKADGLPFLEFYWAEEIQNAIGDGNSALDVHTEASPYNLSNLDSYVSAVQEISNW IINLDPDTIIGTSVFTAREMGQKTEIDEGKLNSLIDSGKTLEASSSDEKDAVDVPSFGKLGYAWAQRNGGSEGNDRLTGL PGPDLFVLSPGNDVISDFRIGEDSISVAGTPDLRFRQTGEGLLISAGDDIHTLLLNVHRDAFLAHEPAHLHIIPAQDDNL I
Sequences:
>Translated_481_residues MSAFSQRIIDLMKTSKNDVLELVIGSFELSKIKAGQPAIGKDQVLYKVGRYDGVNWILEAGYPVQGRTFSDDEKMFDDVA YANGQKVDNAVIVRVDDSTPGNPDSYYVYNENWERVAPGTVTNGMKTVVIGPDKNPYLTDGHHTLNTFSQMKRGGFEDFK INLVVEANYSNLKDKNNNGSSMDEFWIEMANSGNAWLKVLKENEPGYRYLNGVEGDQDEYMVHSVDLDRFKGQLPEEMKP EAFRNDPYRAIMNFTRGIAWEAPEGTKADGLPFLEFYWAEEIQNAIGDGNSALDVHTEASPYNLSNLDSYVSAVQEISNW IINLDPDTIIGTSVFTAREMGQKTEIDEGKLNSLIDSGKTLEASSSDEKDAVDVPSFGKLGYAWAQRNGGSEGNDRLTGL PGPDLFVLSPGNDVISDFRIGEDSISVAGTPDLRFRQTGEGLLISAGDDIHTLLLNVHRDAFLAHEPAHLHIIPAQDDNL I >Mature_480_residues SAFSQRIIDLMKTSKNDVLELVIGSFELSKIKAGQPAIGKDQVLYKVGRYDGVNWILEAGYPVQGRTFSDDEKMFDDVAY ANGQKVDNAVIVRVDDSTPGNPDSYYVYNENWERVAPGTVTNGMKTVVIGPDKNPYLTDGHHTLNTFSQMKRGGFEDFKI NLVVEANYSNLKDKNNNGSSMDEFWIEMANSGNAWLKVLKENEPGYRYLNGVEGDQDEYMVHSVDLDRFKGQLPEEMKPE AFRNDPYRAIMNFTRGIAWEAPEGTKADGLPFLEFYWAEEIQNAIGDGNSALDVHTEASPYNLSNLDSYVSAVQEISNWI INLDPDTIIGTSVFTAREMGQKTEIDEGKLNSLIDSGKTLEASSSDEKDAVDVPSFGKLGYAWAQRNGGSEGNDRLTGLP GPDLFVLSPGNDVISDFRIGEDSISVAGTPDLRFRQTGEGLLISAGDDIHTLLLNVHRDAFLAHEPAHLHIIPAQDDNLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53257; Mature: 53125
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFSQRIIDLMKTSKNDVLELVIGSFELSKIKAGQPAIGKDQVLYKVGRYDGVNWILEA CCHHHHHHHHHHHCCCCCEEHHHHCCEEEEEECCCCCCCCCCHHEEEECCCCCCEEEEEC GYPVQGRTFSDDEKMFDDVAYANGQKVDNAVIVRVDDSTPGNPDSYYVYNENWERVAPGT CCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCEECCCC VTNGMKTVVIGPDKNPYLTDGHHTLNTFSQMKRGGFEDFKINLVVEANYSNLKDKNNNGS CCCCEEEEEECCCCCCCEECCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCC SMDEFWIEMANSGNAWLKVLKENEPGYRYLNGVEGDQDEYMVHSVDLDRFKGQLPEEMKP CHHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCCCCCCEEEEEECHHHHHCCCCHHCCC EAFRNDPYRAIMNFTRGIAWEAPEGTKADGLPFLEFYWAEEIQNAIGDGNSALDVHTEAS HHHCCCHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC PYNLSNLDSYVSAVQEISNWIINLDPDTIIGTSVFTAREMGQKTEIDEGKLNSLIDSGKT CCCHHHHHHHHHHHHHHHCCEEECCCCCEECCHHHHHHHCCCCCCCCCCHHHHHHHCCCE LEASSSDEKDAVDVPSFGKLGYAWAQRNGGSEGNDRLTGLPGPDLFVLSPGNDVISDFRI EECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHEEC GEDSISVAGTPDLRFRQTGEGLLISAGDDIHTLLLNVHRDAFLAHEPAHLHIIPAQDDNL CCCCEEECCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHEECCCCEEEEEECCCCCC I C >Mature Secondary Structure SAFSQRIIDLMKTSKNDVLELVIGSFELSKIKAGQPAIGKDQVLYKVGRYDGVNWILEA CHHHHHHHHHHHCCCCCEEHHHHCCEEEEEECCCCCCCCCCHHEEEECCCCCCEEEEEC GYPVQGRTFSDDEKMFDDVAYANGQKVDNAVIVRVDDSTPGNPDSYYVYNENWERVAPGT CCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCEECCCC VTNGMKTVVIGPDKNPYLTDGHHTLNTFSQMKRGGFEDFKINLVVEANYSNLKDKNNNGS CCCCEEEEEECCCCCCCEECCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCC SMDEFWIEMANSGNAWLKVLKENEPGYRYLNGVEGDQDEYMVHSVDLDRFKGQLPEEMKP CHHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCCCCCCEEEEEECHHHHHCCCCHHCCC EAFRNDPYRAIMNFTRGIAWEAPEGTKADGLPFLEFYWAEEIQNAIGDGNSALDVHTEAS HHHCCCHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC PYNLSNLDSYVSAVQEISNWIINLDPDTIIGTSVFTAREMGQKTEIDEGKLNSLIDSGKT CCCHHHHHHHHHHHHHHHCCEEECCCCCEECCHHHHHHHCCCCCCCCCCHHHHHHHCCCE LEASSSDEKDAVDVPSFGKLGYAWAQRNGGSEGNDRLTGLPGPDLFVLSPGNDVISDFRI EECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHEEC GEDSISVAGTPDLRFRQTGEGLLISAGDDIHTLLLNVHRDAFLAHEPAHLHIIPAQDDNL CCCCEEECCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHEECCCCEEEEEECCCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA