| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is yceA [C]
Identifier: 124022704
GI number: 124022704
Start: 909044
End: 909976
Strand: Direct
Name: yceA [C]
Synonym: P9303_09971
Alternate gene names: 124022704
Gene position: 909044-909976 (Clockwise)
Preceding gene: 124022703
Following gene: 124022706
Centisome position: 33.89
GC content: 46.52
Gene sequence:
>933_bases ATGAATCTGCAAGATGATCAGACCTCTGCAGATCTATTTCAGGTAGCGACTTTCTATTCCTTTACTGCTTGGCCTGAGGT CACTATTACCTGCTTATTGCAGGATCTGCTGAGCCTTGGGGATGAACATCAACTGATGGGAACTGTGCTGTTAGCAGAGG AAGGGGTGAATGGAACGATTTGTGGATCGGTTGATGGTGTTAGCGCTTTGCTTGAGAGGTTAGAACGCGATTTGATCGAG GGTTTGTTTGAGCTGAAAATTAGCTGGACGCCTGAGCAGGCTTTTCGTCGCTTCAAGGTTCGCCGTAAGGCAGAGATTGT GACCATGGGTCTTGCCGGGTTGAATCCATCAAAGACGGTGGGGACTTATGTGGACGCTCATGAATGGAATGATCTAATTG ATGATCCAGATACTCTCTTGATCGATACGCGAAATGACTATGAGATTGCGATTGGGGAATTTAAAGGAGCAATAAACCCC CAAACGAAGTGCTTCCGCGACTTTCCTGCTTGGGTTGAACAGCAGTTGCGTTCCATGGTTAAAGCAAAAACTTCAGCACG AATAGCCATGTATTGCACAGGTGGTATTCGCTGTGAGAAGGCTACGTCTTATCTGATTGAGAAGGGCTTTACTAACGTCC ATCATCTTCGTGGTGGCATTCTTCGTTATTTTGAGGAGGTATCTCAATCTGAAAGTCGCTGGCAAGGAGAGTGTTTTGTT TTTGATCAACGTGTGGCTTTGAATCATCAGCTTTCACCTGGTGTTTATCGTCTTTGTCATGCCTGTGGAATGCCCCTCAC CCCTGAGGATCAGGCGATGAATAGTTATCGGACTGGTGTTCAGTGTCGCCACTGCGTGGATCAATTTAGTGATACGGACC GTATTCGTTTTGCTGAAAGACAACGGCAGATGGAACACAGTTCTAGGAAGTAG
Upstream 100 bases:
>100_bases ACGGCGATAGTTTGCTAACTACCAGCAATCCTGATGTAAAAACTGATCGCGAACTTCTCTCTCAGGCAGGAGTTCATGCG AATTGGGAGGAGAGTGACGA
Downstream 100 bases:
>100_bases ACAACACAGCCATGAAGACAGCGTGTCTGTATATTTTCTTAGTTAGAGATTGGCTAAGTTTAGGCCAAGAGCATTTGAAT GTCTCCAAGCAGGCTTTCCA
Product: sulfurtransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MNLQDDQTSADLFQVATFYSFTAWPEVTITCLLQDLLSLGDEHQLMGTVLLAEEGVNGTICGSVDGVSALLERLERDLIE GLFELKISWTPEQAFRRFKVRRKAEIVTMGLAGLNPSKTVGTYVDAHEWNDLIDDPDTLLIDTRNDYEIAIGEFKGAINP QTKCFRDFPAWVEQQLRSMVKAKTSARIAMYCTGGIRCEKATSYLIEKGFTNVHHLRGGILRYFEEVSQSESRWQGECFV FDQRVALNHQLSPGVYRLCHACGMPLTPEDQAMNSYRTGVQCRHCVDQFSDTDRIRFAERQRQMEHSSRK
Sequences:
>Translated_310_residues MNLQDDQTSADLFQVATFYSFTAWPEVTITCLLQDLLSLGDEHQLMGTVLLAEEGVNGTICGSVDGVSALLERLERDLIE GLFELKISWTPEQAFRRFKVRRKAEIVTMGLAGLNPSKTVGTYVDAHEWNDLIDDPDTLLIDTRNDYEIAIGEFKGAINP QTKCFRDFPAWVEQQLRSMVKAKTSARIAMYCTGGIRCEKATSYLIEKGFTNVHHLRGGILRYFEEVSQSESRWQGECFV FDQRVALNHQLSPGVYRLCHACGMPLTPEDQAMNSYRTGVQCRHCVDQFSDTDRIRFAERQRQMEHSSRK >Mature_310_residues MNLQDDQTSADLFQVATFYSFTAWPEVTITCLLQDLLSLGDEHQLMGTVLLAEEGVNGTICGSVDGVSALLERLERDLIE GLFELKISWTPEQAFRRFKVRRKAEIVTMGLAGLNPSKTVGTYVDAHEWNDLIDDPDTLLIDTRNDYEIAIGEFKGAINP QTKCFRDFPAWVEQQLRSMVKAKTSARIAMYCTGGIRCEKATSYLIEKGFTNVHHLRGGILRYFEEVSQSESRWQGECFV FDQRVALNHQLSPGVYRLCHACGMPLTPEDQAMNSYRTGVQCRHCVDQFSDTDRIRFAERQRQMEHSSRK
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Homo sapiens, GI111038120, Length=267, Percent_Identity=32.2097378277154, Blast_Score=115, Evalue=4e-26, Organism=Escherichia coli, GI1787294, Length=285, Percent_Identity=32.280701754386, Blast_Score=134, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR020936 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 35294; Mature: 35294
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLQDDQTSADLFQVATFYSFTAWPEVTITCLLQDLLSLGDEHQLMGTVLLAEEGVNGTI CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCEE CGSVDGVSALLERLERDLIEGLFELKISWTPEQAFRRFKVRRKAEIVTMGLAGLNPSKTV CCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCC GTYVDAHEWNDLIDDPDTLLIDTRNDYEIAIGEFKGAINPQTKCFRDFPAWVEQQLRSMV CCEECHHHHHHHCCCCCEEEEECCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHH KAKTSARIAMYCTGGIRCEKATSYLIEKGFTNVHHLRGGILRYFEEVSQSESRWQGECFV HHHHCCEEEEEEECCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE FDQRVALNHQLSPGVYRLCHACGMPLTPEDQAMNSYRTGVQCRHCVDQFSDTDRIRFAER EECHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH QRQMEHSSRK HHHHHHHCCC >Mature Secondary Structure MNLQDDQTSADLFQVATFYSFTAWPEVTITCLLQDLLSLGDEHQLMGTVLLAEEGVNGTI CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCEE CGSVDGVSALLERLERDLIEGLFELKISWTPEQAFRRFKVRRKAEIVTMGLAGLNPSKTV CCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCC GTYVDAHEWNDLIDDPDTLLIDTRNDYEIAIGEFKGAINPQTKCFRDFPAWVEQQLRSMV CCEECHHHHHHHCCCCCEEEEECCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHH KAKTSARIAMYCTGGIRCEKATSYLIEKGFTNVHHLRGGILRYFEEVSQSESRWQGECFV HHHHCCEEEEEEECCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE FDQRVALNHQLSPGVYRLCHACGMPLTPEDQAMNSYRTGVQCRHCVDQFSDTDRIRFAER EECHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH QRQMEHSSRK HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917642 [H]