| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is cdsA [H]
Identifier: 124022694
GI number: 124022694
Start: 897988
End: 898902
Strand: Direct
Name: cdsA [H]
Synonym: P9303_09871
Alternate gene names: 124022694
Gene position: 897988-898902 (Clockwise)
Preceding gene: 124022693
Following gene: 124022700
Centisome position: 33.47
GC content: 53.55
Gene sequence:
>915_bases GTGAGAGCAGAGGCCTTTCGATCGAGATTGGTAGCAGCCGGATCTTCCAGCCAGCGGATTAGCAGTGGTCTGGCTGCCGG AGCGTTCGGTTTGGTGGTGGTTGCTTTAGGGGGTTGGTGGTTCACGGTTGGTTTGGGTGTGATCGTGCACCTTGCTTTGC TTGAGTTTTTCCGCATGGCGAAGTTCACCGGAATTAGGCCGGCGACGAAAACGACTCTTGTGGCCTGTCAGTTGTTGCTG ATCAGTACACAGTGGGGAGTGGTTGGCGGCTTGCCATCTGATCTTGCTGCAGCAGTGCTGCCTCTCTCTGGAGCAGCCAT TTGCGGTTGGTTGTTGCTTCAGCCGATCACCGGATCCATTGCCGATATCGCCGCCTCGATCTTTGGGTTGTTTTACTTGG GGTTTTTACCCAGCCATTGGTTGCGATTGCGCAATTTGAGTGCTCTCGATCTTGCCCCTGGGCTGGGTCAGCTTCCTGGC TGGTGTGCAGGCTGGTTGACTTCTGGGATGGCGATCACTTTGGTGGCTTGCTTGATGATCGTCGCTAGTGATATTGGCTC TTATGAATTGGGACGTCGTTTTGGACGCCTACCTTTATCTTCTATTTCGCCTGGCAAGACTGTGGAAGGTGCTGTCGGAG GCCTGTTTTGCGCAATGACTATAGGGGCAGTCGCCGGTGAGCTTTTGGCTTGGCCATTGGGGTTTTTGCTGGGCGTGCTG CTTGGAGTTTTGGTTGCATTATTTGCGCTGGTTGGAGACCTGATCGAGTCGATGATGAAACGAGATGCGGGTCTTAAGGA TTCTGGTGATGCGCTGCCTGGTCATGGCGGCATCCTTGATCGCATTGATAGCTATCTCTTCACTCCTGCAGTGGTGTATT ACGCAGTAACGCTGATCCTGCCTGTCATGAGTTAA
Upstream 100 bases:
>100_bases AGACGTGTGGACTGGCTTTTAGAGCAGCAGAACCTTTGGCCCGAGCAGATCGCTGGTACGGTAAAAGTTCTGGCCTTGTA AGACCATCAATGGTGTGGGC
Downstream 100 bases:
>100_bases TGCGATCAGGGTGTTACTGATGCGCGACCTTTGAGGTGAAGTTGTCCACCGTTCAGAACGGCTTCTTCAATGTGAATAGC AGGGTCCATGGGTAGGGAAG
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MRAEAFRSRLVAAGSSSQRISSGLAAGAFGLVVVALGGWWFTVGLGVIVHLALLEFFRMAKFTGIRPATKTTLVACQLLL ISTQWGVVGGLPSDLAAAVLPLSGAAICGWLLLQPITGSIADIAASIFGLFYLGFLPSHWLRLRNLSALDLAPGLGQLPG WCAGWLTSGMAITLVACLMIVASDIGSYELGRRFGRLPLSSISPGKTVEGAVGGLFCAMTIGAVAGELLAWPLGFLLGVL LGVLVALFALVGDLIESMMKRDAGLKDSGDALPGHGGILDRIDSYLFTPAVVYYAVTLILPVMS
Sequences:
>Translated_304_residues MRAEAFRSRLVAAGSSSQRISSGLAAGAFGLVVVALGGWWFTVGLGVIVHLALLEFFRMAKFTGIRPATKTTLVACQLLL ISTQWGVVGGLPSDLAAAVLPLSGAAICGWLLLQPITGSIADIAASIFGLFYLGFLPSHWLRLRNLSALDLAPGLGQLPG WCAGWLTSGMAITLVACLMIVASDIGSYELGRRFGRLPLSSISPGKTVEGAVGGLFCAMTIGAVAGELLAWPLGFLLGVL LGVLVALFALVGDLIESMMKRDAGLKDSGDALPGHGGILDRIDSYLFTPAVVYYAVTLILPVMS >Mature_304_residues MRAEAFRSRLVAAGSSSQRISSGLAAGAFGLVVVALGGWWFTVGLGVIVHLALLEFFRMAKFTGIRPATKTTLVACQLLL ISTQWGVVGGLPSDLAAAVLPLSGAAICGWLLLQPITGSIADIAASIFGLFYLGFLPSHWLRLRNLSALDLAPGLGQLPG WCAGWLTSGMAITLVACLMIVASDIGSYELGRRFGRLPLSSISPGKTVEGAVGGLFCAMTIGAVAGELLAWPLGFLLGVL LGVLVALFALVGDLIESMMKRDAGLKDSGDALPGHGGILDRIDSYLFTPAVVYYAVTLILPVMS
Specific function: Unknown
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI1787677, Length=116, Percent_Identity=44.8275862068966, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI87081696, Length=134, Percent_Identity=41.7910447761194, Blast_Score=90, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 31618; Mature: 31618
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAEAFRSRLVAAGSSSQRISSGLAAGAFGLVVVALGGWWFTVGLGVIVHLALLEFFRMA CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFTGIRPATKTTLVACQLLLISTQWGVVGGLPSDLAAAVLPLSGAAICGWLLLQPITGSI HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHH ADIAASIFGLFYLGFLPSHWLRLRNLSALDLAPGLGQLPGWCAGWLTSGMAITLVACLMI HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH VASDIGSYELGRRFGRLPLSSISPGKTVEGAVGGLFCAMTIGAVAGELLAWPLGFLLGVL HHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVLVALFALVGDLIESMMKRDAGLKDSGDALPGHGGILDRIDSYLFTPAVVYYAVTLIL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH PVMS HHCC >Mature Secondary Structure MRAEAFRSRLVAAGSSSQRISSGLAAGAFGLVVVALGGWWFTVGLGVIVHLALLEFFRMA CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFTGIRPATKTTLVACQLLLISTQWGVVGGLPSDLAAAVLPLSGAAICGWLLLQPITGSI HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHH ADIAASIFGLFYLGFLPSHWLRLRNLSALDLAPGLGQLPGWCAGWLTSGMAITLVACLMI HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH VASDIGSYELGRRFGRLPLSSISPGKTVEGAVGGLFCAMTIGAVAGELLAWPLGFLLGVL HHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVLVALFALVGDLIESMMKRDAGLKDSGDALPGHGGILDRIDSYLFTPAVVYYAVTLIL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH PVMS HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]