| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is opcA [H]
Identifier: 124022648
GI number: 124022648
Start: 851724
End: 853013
Strand: Reverse
Name: opcA [H]
Synonym: P9303_09391
Alternate gene names: 124022648
Gene position: 853013-851724 (Counterclockwise)
Preceding gene: 124022649
Following gene: 124022647
Centisome position: 31.8
GC content: 57.21
Gene sequence:
>1290_bases ATGTCCCCCCAGCTCACGCTTCAGAGCCCTCTGCAACTCCCTCCTAGTGAGGTCCCTAGCTATCTCGAGCAGCTCTGGTT AAACGATCAACCTGGCAACACAGGCGCCAAAACATTCTCCCTGCTGGTTTGGCAGCCGGCCTGGGTCGAACAGCAGCTGG TTAGAACCGGCCAGATTGATGGCCCGATCATTGGATCGCAGAGCCAAGAGCTCATCCAAGCTGCCCGCCAAGCCGTAACC GAAGGCGATCTACCCCACAGCACACCTCCTCTGGATTCAAGTGTTGCAGCAGTCCTTGCCAATCGCAAAGGCAATCAACA TGGCGAGGATTTACGTGGGCAACACATTGATGCTGCCATCAGTGCCTTAGAACCTCGACGCCTGATCACACTGGCACCAA CCCTCGATAAGGGGCATGACCTCGAGACACTCGTGGCTGCCTATTGCCCACTACCAGAAGAAGGAGGAGGAAACAGCGCC TGCGGAGATGTGGTGGTGCTTCGCGGTGATCATCACGCCCTAACAGATGGGCTGGGAATCCTTCAACCTCTACTACCTGC AGAACTGCCCGCTTGGGTCTGGTGGAACGGCAGCCTGGACGAAGCTCCCGAATTGCTCGAGCGGCTGGCTGTGACCCCAC GACGCCTGGTGATCGATACAGCACTAGGAGATCCCCATCGCTGCATTGAGCTGCTCAAGGCCCATGTGGAAGCAGGCCCA GCGGTGAATGATCTGAATTGGTTAAGGCTGCGCACTTGGCGAGAACACCTCGCAATGGTGTTTGACCCACCACACCGCCG CAATGCCCTTAGTCATGTTGATCAGCTCGAAATCGACGTTGAGGGTCATCACCCCGTCCAGGGGCTTTTGTTAGCCGCCT GGATCGCCGATCGACTGGGATGGCAATTAAAAGCCGCCCAGAAAATAAAAAGGGAAGGCATTGCTGCCGAATTCCGCCGA ACCGATGGCACCACTGTTCAGTTTCGTCTTATGCCTGTACCCATGGGGCAACCGAGCATTCATCCTGGCCAGATCGTGGG GGTCAGGTTGATCTGCAAGCCAGATGCACAACTCGAACATGCCGTTTGCGTGATTCTCTGTGCCGAATCTGGCGGCTGCA TGAGACTCGAAGCAGGTGGCATGGCCAGCATGGAGCTGATTGAAGAAGTCGTCCCCATGCAGGTCGCGTCTGTAGAGATG GATGTAGCCAGACTCCTCGCTGGTGGCCATAACACCACCACCCCCCTGCTGGCCGCTGCAGCCCCCCTTGCTGCCAAGCT GCTTAGCTAG
Upstream 100 bases:
>100_bases GGCCCGCTGCTGCCGATACCCTGCTTGCCAATGACGGATTGCTCTGGCGCCGACCCTGATCCCGCCTGGCTTATCTCATC TTGATTACTCAGCTCTAGCC
Downstream 100 bases:
>100_bases ACGCCCTTTGGCGAAGCCCTTTTTCAGCCGCCACCCGTCATGGCCTGTGTGATTGCTGCCCCAGCCAGTGGCACTGGGAA AACCTTACTAAGCCTGACCC
Product: glucose 6-phosphate dehydrogenase effector OpcA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MSPQLTLQSPLQLPPSEVPSYLEQLWLNDQPGNTGAKTFSLLVWQPAWVEQQLVRTGQIDGPIIGSQSQELIQAARQAVT EGDLPHSTPPLDSSVAAVLANRKGNQHGEDLRGQHIDAAISALEPRRLITLAPTLDKGHDLETLVAAYCPLPEEGGGNSA CGDVVVLRGDHHALTDGLGILQPLLPAELPAWVWWNGSLDEAPELLERLAVTPRRLVIDTALGDPHRCIELLKAHVEAGP AVNDLNWLRLRTWREHLAMVFDPPHRRNALSHVDQLEIDVEGHHPVQGLLLAAWIADRLGWQLKAAQKIKREGIAAEFRR TDGTTVQFRLMPVPMGQPSIHPGQIVGVRLICKPDAQLEHAVCVILCAESGGCMRLEAGGMASMELIEEVVPMQVASVEM DVARLLAGGHNTTTPLLAAAAPLAAKLLS
Sequences:
>Translated_429_residues MSPQLTLQSPLQLPPSEVPSYLEQLWLNDQPGNTGAKTFSLLVWQPAWVEQQLVRTGQIDGPIIGSQSQELIQAARQAVT EGDLPHSTPPLDSSVAAVLANRKGNQHGEDLRGQHIDAAISALEPRRLITLAPTLDKGHDLETLVAAYCPLPEEGGGNSA CGDVVVLRGDHHALTDGLGILQPLLPAELPAWVWWNGSLDEAPELLERLAVTPRRLVIDTALGDPHRCIELLKAHVEAGP AVNDLNWLRLRTWREHLAMVFDPPHRRNALSHVDQLEIDVEGHHPVQGLLLAAWIADRLGWQLKAAQKIKREGIAAEFRR TDGTTVQFRLMPVPMGQPSIHPGQIVGVRLICKPDAQLEHAVCVILCAESGGCMRLEAGGMASMELIEEVVPMQVASVEM DVARLLAGGHNTTTPLLAAAAPLAAKLLS >Mature_428_residues SPQLTLQSPLQLPPSEVPSYLEQLWLNDQPGNTGAKTFSLLVWQPAWVEQQLVRTGQIDGPIIGSQSQELIQAARQAVTE GDLPHSTPPLDSSVAAVLANRKGNQHGEDLRGQHIDAAISALEPRRLITLAPTLDKGHDLETLVAAYCPLPEEGGGNSAC GDVVVLRGDHHALTDGLGILQPLLPAELPAWVWWNGSLDEAPELLERLAVTPRRLVIDTALGDPHRCIELLKAHVEAGPA VNDLNWLRLRTWREHLAMVFDPPHRRNALSHVDQLEIDVEGHHPVQGLLLAAWIADRLGWQLKAAQKIKREGIAAEFRRT DGTTVQFRLMPVPMGQPSIHPGQIVGVRLICKPDAQLEHAVCVILCAESGGCMRLEAGGMASMELIEEVVPMQVASVEMD VARLLAGGHNTTTPLLAAAAPLAAKLLS
Specific function: May be involved in the functional assembly of glucose 6- phosphate dehydrogenase [H]
COG id: COG3429
COG function: function code G; Glucose-6-P dehydrogenase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019297 - InterPro: IPR004555 - InterPro: IPR002477 [H]
Pfam domain/function: PF10128 OpcA_G6PD_assem; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 46473; Mature: 46342
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQLTLQSPLQLPPSEVPSYLEQLWLNDQPGNTGAKTFSLLVWQPAWVEQQLVRTGQID CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCC GPIIGSQSQELIQAARQAVTEGDLPHSTPPLDSSVAAVLANRKGNQHGEDLRGQHIDAAI CCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCHHHHHH SALEPRRLITLAPTLDKGHDLETLVAAYCPLPEEGGGNSACGDVVVLRGDHHALTDGLGI HHCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH LQPLLPAELPAWVWWNGSLDEAPELLERLAVTPRRLVIDTALGDPHRCIELLKAHVEAGP HHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCC AVNDLNWLRLRTWREHLAMVFDPPHRRNALSHVDQLEIDVEGHHPVQGLLLAAWIADRLG CCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHC WQLKAAQKIKREGIAAEFRRTDGTTVQFRLMPVPMGQPSIHPGQIVGVRLICKPDAQLEH CHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCC AVCVILCAESGGCMRLEAGGMASMELIEEVVPMQVASVEMDVARLLAGGHNTTTPLLAAA EEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH APLAAKLLS HHHHHHHCC >Mature Secondary Structure SPQLTLQSPLQLPPSEVPSYLEQLWLNDQPGNTGAKTFSLLVWQPAWVEQQLVRTGQID CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCC GPIIGSQSQELIQAARQAVTEGDLPHSTPPLDSSVAAVLANRKGNQHGEDLRGQHIDAAI CCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCHHHHHH SALEPRRLITLAPTLDKGHDLETLVAAYCPLPEEGGGNSACGDVVVLRGDHHALTDGLGI HHCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH LQPLLPAELPAWVWWNGSLDEAPELLERLAVTPRRLVIDTALGDPHRCIELLKAHVEAGP HHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCC AVNDLNWLRLRTWREHLAMVFDPPHRRNALSHVDQLEIDVEGHHPVQGLLLAAWIADRLG CCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHC WQLKAAQKIKREGIAAEFRRTDGTTVQFRLMPVPMGQPSIHPGQIVGVRLICKPDAQLEH CHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCC AVCVILCAESGGCMRLEAGGMASMELIEEVVPMQVASVEMDVARLLAGGHNTTTPLLAAA EEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH APLAAKLLS HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8566707 [H]