| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022645
Identifier: 124022645
GI number: 124022645
Start: 848830
End: 849519
Strand: Reverse
Name: 124022645
Synonym: P9303_09361
Alternate gene names: NA
Gene position: 849519-848830 (Counterclockwise)
Preceding gene: 124022646
Following gene: 124022640
Centisome position: 31.67
GC content: 52.9
Gene sequence:
>690_bases ATGGCTGACACCACCCTCTGGGCCGAACTATTGGCCTTCGGCACCGGCTTAGCTCTCTCGCCGATCCATTTAGGAGTCCT ACTTCTCCTACTGCTAGGGCCTAAACCGATTCAGCGGGGAAGTTGGTTCGTTACTGGCTGGATCGTAACCACTCTGGTCA CCGTCATCCTGCTGCTGACTGTGGGCCACAGCTTGGTGTTGGACATGACCCAAGGCTCTCATCATCGAACAGCTCTCGAC CTTCTTGGCGGAGGAGCCTTGATCTCGTTGGGATTAAAGGAGCTCTTGCGTTCGTTTGCTGCAGGAGAAGAACAACCAGC CTGGACCCATACGATCGAACGATTTATCAATTTGCCGCTGCCGCTTTTGATCGCCGTTGGTGCGCTAACAGAACTCATCA GCCCAGATGACCTCTTCCTATTTGCCAAGACTTCAGCCGTGGTACTAGCCGCAAGCCTCCCCAGCTGGCAAGAAATCGTT GGCTTGGTGTTTTTCACATTTGGCTCGAGCCTGCTGCTACTGATCCCACTGGTCGCCGTGATCATTGGCAGAGAACGCGT CATTCCCTTGCTGCAATCTGGGAAACAAATTTTATTTGCCAAAGGTGACTTAATCGTTGGTGGGGTGAGTTTTGCTCTAG GTGCCTACCTTGGTTGGCAAGGAATCAGCGGTCTGACGATTGTGATCTGA
Upstream 100 bases:
>100_bases CCCTCTGCACTGGCAAGTTCTAAATCAAACAACGAAAGGTTCTTACGCCAAGATTGACCATTGATCATGAGCGATATTGA CAGCTCACCTGATCGCCTCA
Downstream 100 bases:
>100_bases GTTGATCCAGCCAGCGACCTTGTGAGGCAGCGGCTCCTGTTTTCCCCACAAGCCACACACCTGTGCGGGCACGACTAACA GCCACATAAACCAGTTGTCG
Product: cytochrome C biogenesis protein transmembrane region protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MADTTLWAELLAFGTGLALSPIHLGVLLLLLLGPKPIQRGSWFVTGWIVTTLVTVILLLTVGHSLVLDMTQGSHHRTALD LLGGGALISLGLKELLRSFAAGEEQPAWTHTIERFINLPLPLLIAVGALTELISPDDLFLFAKTSAVVLAASLPSWQEIV GLVFFTFGSSLLLLIPLVAVIIGRERVIPLLQSGKQILFAKGDLIVGGVSFALGAYLGWQGISGLTIVI
Sequences:
>Translated_229_residues MADTTLWAELLAFGTGLALSPIHLGVLLLLLLGPKPIQRGSWFVTGWIVTTLVTVILLLTVGHSLVLDMTQGSHHRTALD LLGGGALISLGLKELLRSFAAGEEQPAWTHTIERFINLPLPLLIAVGALTELISPDDLFLFAKTSAVVLAASLPSWQEIV GLVFFTFGSSLLLLIPLVAVIIGRERVIPLLQSGKQILFAKGDLIVGGVSFALGAYLGWQGISGLTIVI >Mature_228_residues ADTTLWAELLAFGTGLALSPIHLGVLLLLLLGPKPIQRGSWFVTGWIVTTLVTVILLLTVGHSLVLDMTQGSHHRTALDL LGGGALISLGLKELLRSFAAGEEQPAWTHTIERFINLPLPLLIAVGALTELISPDDLFLFAKTSAVVLAASLPSWQEIVG LVFFTFGSSLLLLIPLVAVIIGRERVIPLLQSGKQILFAKGDLIVGGVSFALGAYLGWQGISGLTIVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24329; Mature: 24198
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTTLWAELLAFGTGLALSPIHLGVLLLLLLGPKPIQRGSWFVTGWIVTTLVTVILLLT CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHH VGHSLVLDMTQGSHHRTALDLLGGGALISLGLKELLRSFAAGEEQPAWTHTIERFINLPL CCCHHEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCH PLLIAVGALTELISPDDLFLFAKTSAVVLAASLPSWQEIVGLVFFTFGSSLLLLIPLVAV HHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHH IIGRERVIPLLQSGKQILFAKGDLIVGGVSFALGAYLGWQGISGLTIVI HHCCHHHHHHHHCCCEEEEECCCEEECHHHHHHHHHHCCCCCCCEEEEC >Mature Secondary Structure ADTTLWAELLAFGTGLALSPIHLGVLLLLLLGPKPIQRGSWFVTGWIVTTLVTVILLLT CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHH VGHSLVLDMTQGSHHRTALDLLGGGALISLGLKELLRSFAAGEEQPAWTHTIERFINLPL CCCHHEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCH PLLIAVGALTELISPDDLFLFAKTSAVVLAASLPSWQEIVGLVFFTFGSSLLLLIPLVAV HHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHH IIGRERVIPLLQSGKQILFAKGDLIVGGVSFALGAYLGWQGISGLTIVI HHCCHHHHHHHHCCCEEEEECCCEEECHHHHHHHHHHCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA