| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022640
Identifier: 124022640
GI number: 124022640
Start: 842842
End: 844866
Strand: Reverse
Name: 124022640
Synonym: P9303_09311
Alternate gene names: NA
Gene position: 844866-842842 (Counterclockwise)
Preceding gene: 124022645
Following gene: 124022633
Centisome position: 31.49
GC content: 56.3
Gene sequence:
>2025_bases ATGCCCCACAAGGCTGCACTCCTGCTGGCTTGCATTTGTGTAGCAATCATCTCTAGCTGGCCCTGGTTGGTTGAACCAAA TTTGAACCCAGGACTTCCAGCTCCATTTGAGGCACGAGCCCCGAAGGATGCTCGCGTCGTTGACAGTGAAGCTCACGAAC AAAGGCGCTCTCAACTCATACAGAGCACCTTTGTACAGGTAATCGATCAACAAGAAACAACCAGGCTCAAAAAACGGCTA GAGCGCAACCTCGCTGAGCTGGAACGTGTTGCACGCAATCCAAAGACTGGCCGCATAGGGCCTGTCAATCTCACTGCCGA AGAACAAACCTGGCTCAAGAACCGCTCCCAACAGGAACGCAAACGCTGGGACATGGCCATCCGCCGTGCCTCAGAACGCA TGCTCAGTCAAGGACTGAACAATCTCGCCCTTGAGCAGCTACAAGATGCAGCCTCAATTCAATTAGCCGACCTAGGCGAG CAGAACGGCCCTGCGAGAAGTCTTAGCAGCAAGCTGCTTGCCACAAGCTATCAAGGCAGTACCAATCTGCGCACAGATCC AGCCCGCAGCCAACGCCTCATTGAAGAGCTGATTACCAAACAAGACATCCCAACCATTGAAGTCCGCCGCGGCGATCTGA TCACGAGCAAAGGAGAACCCATCAGCCCAAGGGCCTATGCCGTTTTAAATCACTTCGGCCTTGTCAGTCGAGGCCCAGAC TGGGGGCCTTGGCTCAGCCGATTCAGTACAGCCCTCGCCGGCTGTGGCGTGATGCTGCTGATCATGCGACGGGAGCGTCC CTGCCTAGAAGCACGTCATGGCCTCCTAGCCGTTGGATTGCTGCTAATCACTCAGGTCAGCAAGCTCTGGTTGGTTCCTG AGGTGAGCCCCCTAGCGCTAATCGTGCCGCCGACACTCCTGCTCGCCCAAGGTCTTGGCACGACCTGTGGCCTGGCATGG ATGGCTGTAGAGAGCCTGCTATGGCCTATGCCAGTCAACGGCCTTGGCGAAGGTCCAATGATGATTGCCTGTGTCGTTGC TGCTGTGGCAGCTTTTTATGCCGGCCGTCTGCGTAGCAGGGTCCAGCTGTTGCAAATGGCCTTTTTGTTGCCGTTAGCAG CCCTGCTGGCTGAGTGGCTGCTCCTGAGTGTGGGCGGCGGCGGCACCTGGGGACGATTTGCACCCAATGGCAATGAACTT CTCTCAGAAGCACTGCTAATGGGGATCTTGCTGATGCTGGCGATCCTGCTGACCCCAATTTTGGAGACCTCTTTTGGCCT GCTCACAAGAGCCCGCTTGTTGGAATTGGCCGATCAAGAGCGCCCTCTGCTACGCCGTCTCTCCGCAGAAGCTCCAGGGA CTTTCGAGCACACATTGATGATCTGTGGGCTTGCAGAGGAAGGGGCCAGAGCCATCGGTGCCGATGTCGACCTGATCCGT ACCGGTGCCTTGTATCACGATGTTGGCAAGCTCCACGCACCAAAGTGGTTTATCGAGAATCAGATCGAAGGAGAGGAAAA TCCTCACGATCAACTGAATAATCCCCACGGCAGCGTGGAAGTGCTTCAAGCCCATGTGGATGAGGGATTAAAGCTGGCGC GTCGCTACCGCTTACCGCGCCGAGTGGCGGACTTCATCCCTGAACATCAAGGCACTTTGAAGATGGGGTATTTCCTTCAT CTTGCAAGAGAAGTAGACCCCTCCGCTGCAGAAAGAAACTTCCGCTACCGCGGACCAACACCTCGTTCCCGCGAGACTGG AATCTTGATGCTGGCCGACGGCTGTGAAGCATGCCTTCGCTCCCTGCCACCGAACACCTCTGATCGCGAGGCACACGCCA CCGTGAAGAGAATTGTTGAGGAGCGACAACGGGATGGGCAACTGAAAAAAAGCAGCCTCAGCCGAGCCGAAGTAGAGCTC GTGGGGCGTGCTTTCGTACGTGTTTGGCGACGCATGCGCCATCGCCGCATCCCTTATCCGATACCTGCACGCAAGGCATT CCCCCCATTAGCAGCTAAAAGCTGA
Upstream 100 bases:
>100_bases ACAAGTGCCAGCTTCTGTGGTCCGTCTTCCAACCTTAAACAGGCTCTGGCAGAGCTGGTTACGCAGCGAGTCGCCGCGGC GTCCGGTGCTCCGCTGGTCG
Downstream 100 bases:
>100_bases GGGAATCAAATCAATGCCTTACAGATTCATATCGCCATCTAATCACTATCAAATAAATCTAAGTCTCGGTGAAAGGTTCA AGTACCATCAACAACCGCGA
Product: HD superfamily hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 674; Mature: 673
Protein sequence:
>674_residues MPHKAALLLACICVAIISSWPWLVEPNLNPGLPAPFEARAPKDARVVDSEAHEQRRSQLIQSTFVQVIDQQETTRLKKRL ERNLAELERVARNPKTGRIGPVNLTAEEQTWLKNRSQQERKRWDMAIRRASERMLSQGLNNLALEQLQDAASIQLADLGE QNGPARSLSSKLLATSYQGSTNLRTDPARSQRLIEELITKQDIPTIEVRRGDLITSKGEPISPRAYAVLNHFGLVSRGPD WGPWLSRFSTALAGCGVMLLIMRRERPCLEARHGLLAVGLLLITQVSKLWLVPEVSPLALIVPPTLLLAQGLGTTCGLAW MAVESLLWPMPVNGLGEGPMMIACVVAAVAAFYAGRLRSRVQLLQMAFLLPLAALLAEWLLLSVGGGGTWGRFAPNGNEL LSEALLMGILLMLAILLTPILETSFGLLTRARLLELADQERPLLRRLSAEAPGTFEHTLMICGLAEEGARAIGADVDLIR TGALYHDVGKLHAPKWFIENQIEGEENPHDQLNNPHGSVEVLQAHVDEGLKLARRYRLPRRVADFIPEHQGTLKMGYFLH LAREVDPSAAERNFRYRGPTPRSRETGILMLADGCEACLRSLPPNTSDREAHATVKRIVEERQRDGQLKKSSLSRAEVEL VGRAFVRVWRRMRHRRIPYPIPARKAFPPLAAKS
Sequences:
>Translated_674_residues MPHKAALLLACICVAIISSWPWLVEPNLNPGLPAPFEARAPKDARVVDSEAHEQRRSQLIQSTFVQVIDQQETTRLKKRL ERNLAELERVARNPKTGRIGPVNLTAEEQTWLKNRSQQERKRWDMAIRRASERMLSQGLNNLALEQLQDAASIQLADLGE QNGPARSLSSKLLATSYQGSTNLRTDPARSQRLIEELITKQDIPTIEVRRGDLITSKGEPISPRAYAVLNHFGLVSRGPD WGPWLSRFSTALAGCGVMLLIMRRERPCLEARHGLLAVGLLLITQVSKLWLVPEVSPLALIVPPTLLLAQGLGTTCGLAW MAVESLLWPMPVNGLGEGPMMIACVVAAVAAFYAGRLRSRVQLLQMAFLLPLAALLAEWLLLSVGGGGTWGRFAPNGNEL LSEALLMGILLMLAILLTPILETSFGLLTRARLLELADQERPLLRRLSAEAPGTFEHTLMICGLAEEGARAIGADVDLIR TGALYHDVGKLHAPKWFIENQIEGEENPHDQLNNPHGSVEVLQAHVDEGLKLARRYRLPRRVADFIPEHQGTLKMGYFLH LAREVDPSAAERNFRYRGPTPRSRETGILMLADGCEACLRSLPPNTSDREAHATVKRIVEERQRDGQLKKSSLSRAEVEL VGRAFVRVWRRMRHRRIPYPIPARKAFPPLAAKS >Mature_673_residues PHKAALLLACICVAIISSWPWLVEPNLNPGLPAPFEARAPKDARVVDSEAHEQRRSQLIQSTFVQVIDQQETTRLKKRLE RNLAELERVARNPKTGRIGPVNLTAEEQTWLKNRSQQERKRWDMAIRRASERMLSQGLNNLALEQLQDAASIQLADLGEQ NGPARSLSSKLLATSYQGSTNLRTDPARSQRLIEELITKQDIPTIEVRRGDLITSKGEPISPRAYAVLNHFGLVSRGPDW GPWLSRFSTALAGCGVMLLIMRRERPCLEARHGLLAVGLLLITQVSKLWLVPEVSPLALIVPPTLLLAQGLGTTCGLAWM AVESLLWPMPVNGLGEGPMMIACVVAAVAAFYAGRLRSRVQLLQMAFLLPLAALLAEWLLLSVGGGGTWGRFAPNGNELL SEALLMGILLMLAILLTPILETSFGLLTRARLLELADQERPLLRRLSAEAPGTFEHTLMICGLAEEGARAIGADVDLIRT GALYHDVGKLHAPKWFIENQIEGEENPHDQLNNPHGSVEVLQAHVDEGLKLARRYRLPRRVADFIPEHQGTLKMGYFLHL AREVDPSAAERNFRYRGPTPRSRETGILMLADGCEACLRSLPPNTSDREAHATVKRIVEERQRDGQLKKSSLSRAEVELV GRAFVRVWRRMRHRRIPYPIPARKAFPPLAAKS
Specific function: Unknown
COG id: COG1480
COG function: function code R; Predicted membrane-associated HD superfamily hydrolase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011624 - InterPro: IPR011621 - InterPro: IPR003607 - InterPro: IPR006675 [H]
Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]
EC number: NA
Molecular weight: Translated: 74918; Mature: 74787
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHKAALLLACICVAIISSWPWLVEPNLNPGLPAPFEARAPKDARVVDSEAHEQRRSQLI CCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHH QSTFVQVIDQQETTRLKKRLERNLAELERVARNPKTGRIGPVNLTAEEQTWLKNRSQQER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHCCHHHHH KRWDMAIRRASERMLSQGLNNLALEQLQDAASIQLADLGEQNGPARSLSSKLLATSYQGS HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEEHHHCCCCCCCHHHHHHHHHHHCCCCC TNLRTDPARSQRLIEELITKQDIPTIEVRRGDLITSKGEPISPRAYAVLNHFGLVSRGPD CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCCHHHHHHHHHCCCCCCCC WGPWLSRFSTALAGCGVMLLIMRRERPCLEARHGLLAVGLLLITQVSKLWLVPEVSPLAL CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE IVPPTLLLAQGLGTTCGLAWMAVESLLWPMPVNGLGEGPMMIACVVAAVAAFYAGRLRSR ECCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VQLLQMAFLLPLAALLAEWLLLSVGGGGTWGRFAPNGNELLSEALLMGILLMLAILLTPI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LETSFGLLTRARLLELADQERPLLRRLSAEAPGTFEHTLMICGLAEEGARAIGADVDLIR HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHEEEECHHHHHHHHCCCHHHHH TGALYHDVGKLHAPKWFIENQIEGEENPHDQLNNPHGSVEVLQAHVDEGLKLARRYRLPR HHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHH RVADFIPEHQGTLKMGYFLHLAREVDPSAAERNFRYRGPTPRSRETGILMLADGCEACLR HHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHH SLPPNTSDREAHATVKRIVEERQRDGQLKKSSLSRAEVELVGRAFVRVWRRMRHRRIPYP HCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IPARKAFPPLAAKS CCCCCCCCCCCCCC >Mature Secondary Structure PHKAALLLACICVAIISSWPWLVEPNLNPGLPAPFEARAPKDARVVDSEAHEQRRSQLI CCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHH QSTFVQVIDQQETTRLKKRLERNLAELERVARNPKTGRIGPVNLTAEEQTWLKNRSQQER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHCCHHHHH KRWDMAIRRASERMLSQGLNNLALEQLQDAASIQLADLGEQNGPARSLSSKLLATSYQGS HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEEHHHCCCCCCCHHHHHHHHHHHCCCCC TNLRTDPARSQRLIEELITKQDIPTIEVRRGDLITSKGEPISPRAYAVLNHFGLVSRGPD CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCCHHHHHHHHHCCCCCCCC WGPWLSRFSTALAGCGVMLLIMRRERPCLEARHGLLAVGLLLITQVSKLWLVPEVSPLAL CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE IVPPTLLLAQGLGTTCGLAWMAVESLLWPMPVNGLGEGPMMIACVVAAVAAFYAGRLRSR ECCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VQLLQMAFLLPLAALLAEWLLLSVGGGGTWGRFAPNGNELLSEALLMGILLMLAILLTPI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LETSFGLLTRARLLELADQERPLLRRLSAEAPGTFEHTLMICGLAEEGARAIGADVDLIR HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHEEEECHHHHHHHHCCCHHHHH TGALYHDVGKLHAPKWFIENQIEGEENPHDQLNNPHGSVEVLQAHVDEGLKLARRYRLPR HHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHH RVADFIPEHQGTLKMGYFLHLAREVDPSAAERNFRYRGPTPRSRETGILMLADGCEACLR HHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHH SLPPNTSDREAHATVKRIVEERQRDGQLKKSSLSRAEVELVGRAFVRVWRRMRHRRIPYP HCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IPARKAFPPLAAKS CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]