| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is folD
Identifier: 124022641
GI number: 124022641
Start: 845021
End: 845929
Strand: Direct
Name: folD
Synonym: P9303_09321
Alternate gene names: 124022641
Gene position: 845021-845929 (Clockwise)
Preceding gene: 124022639
Following gene: 124022642
Centisome position: 31.5
GC content: 55.56
Gene sequence:
>909_bases ATGGCCCTTAGGCTTGATGGCAAACAACTGGCCGCAGAATTGGAGCAGCGTCTCCAAGCTGAAATTGCGGCTGGCTTGGT GCAAGCGGGAAGGCCGCCAGGGTTAGCTGTGGTGCGTATCGGGGACGACCCCGCCAGTGGGGTGTATGTGGCCAACAAGC AGAAAGCTTGTGGGCGTATCGGTATGGCTAGTTATCTGTCACATCTGCCTGCAAAGGTTCCTGCGGCAGAGGTGTTGGCC ACGATTCAGTCTTTGAATCTTGATGAGCGAGTGGACGGCATTCTTTTGCAATTGCCTCTACCCAAGGGCCTTGATGAAGG GCCTTTGCTTGCTGCGATTGATCCCGAGAAAGATGCCGATGGTCTGCATACACTCAACCTTGGCCGATTGTTGAAAGGTG AGCCTGGGCCGCGTAGTTGTACACCTGGGGGTGTGATGGCCTTGTTGGCACGCCACCAGATTCCTTTGGCGGGAAAAAGG GCTGTTGTGATTGGGCGCAGCATCCTGGTAGGCCAACCAATGGCATTGATGCTTCAGGCTGCAAATGCCACCGTGAGCGT GGCCCATTCTCATACCGATGATCTGGCCTCGTTAACTCAGCAGGCTGATGTGTTGGTGGTAGCGGCCGGGCGAGCGCGGA TGATTGGTTCAGAGCATGTCAAGCCAGGAGCAGTGGTTGTCGATGTTGGCATTCATCGCCTTCCCGCAGATCCTGAACTG GGGCCGCAAGTTAAGGCCAGGTTGTGTGGAGATGTACGAGCGCAAGAAGTTGAACCTTTAGCAAGTGCATTGACCCCTGT TCCTGGTGGTGTAGGTCCGATGACCGTGACCATGCTCTTGGTGAATACCGTGGCTAGATGGCAGCAGCATTGCGGTTTGC CCTTCGGCCTGAGAGATTTGCTGGTTTGA
Upstream 100 bases:
>100_bases GAGCCTGTTTAAGGTTGGAAGACGGACCACAGAAGCTGGCACTTGTCCTAAACGCTAGCTCTCTTCTGCGTGCATGCTTG GGGAAGCATCGGATCGGTGA
Downstream 100 bases:
>100_bases GACTGGTTGGCCTGAGAGAATCCCATGAACGAGACAAGGTTCATGGCGGCGGCGGTCAGCACCTTCTTCGATTTCCCCGC CTATTTGGCTGCGGCCAAAG
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MALRLDGKQLAAELEQRLQAEIAAGLVQAGRPPGLAVVRIGDDPASGVYVANKQKACGRIGMASYLSHLPAKVPAAEVLA TIQSLNLDERVDGILLQLPLPKGLDEGPLLAAIDPEKDADGLHTLNLGRLLKGEPGPRSCTPGGVMALLARHQIPLAGKR AVVIGRSILVGQPMALMLQAANATVSVAHSHTDDLASLTQQADVLVVAAGRARMIGSEHVKPGAVVVDVGIHRLPADPEL GPQVKARLCGDVRAQEVEPLASALTPVPGGVGPMTVTMLLVNTVARWQQHCGLPFGLRDLLV
Sequences:
>Translated_302_residues MALRLDGKQLAAELEQRLQAEIAAGLVQAGRPPGLAVVRIGDDPASGVYVANKQKACGRIGMASYLSHLPAKVPAAEVLA TIQSLNLDERVDGILLQLPLPKGLDEGPLLAAIDPEKDADGLHTLNLGRLLKGEPGPRSCTPGGVMALLARHQIPLAGKR AVVIGRSILVGQPMALMLQAANATVSVAHSHTDDLASLTQQADVLVVAAGRARMIGSEHVKPGAVVVDVGIHRLPADPEL GPQVKARLCGDVRAQEVEPLASALTPVPGGVGPMTVTMLLVNTVARWQQHCGLPFGLRDLLV >Mature_301_residues ALRLDGKQLAAELEQRLQAEIAAGLVQAGRPPGLAVVRIGDDPASGVYVANKQKACGRIGMASYLSHLPAKVPAAEVLAT IQSLNLDERVDGILLQLPLPKGLDEGPLLAAIDPEKDADGLHTLNLGRLLKGEPGPRSCTPGGVMALLARHQIPLAGKRA VVIGRSILVGQPMALMLQAANATVSVAHSHTDDLASLTQQADVLVVAAGRARMIGSEHVKPGAVVVDVGIHRLPADPELG PQVKARLCGDVRAQEVEPLASALTPVPGGVGPMTVTMLLVNTVARWQQHCGLPFGLRDLLV
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222418558, Length=293, Percent_Identity=40.9556313993174, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI222136639, Length=285, Percent_Identity=40.7017543859649, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI94721354, Length=293, Percent_Identity=39.2491467576792, Blast_Score=194, Evalue=6e-50, Organism=Homo sapiens, GI36796743, Length=209, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=3e-13, Organism=Escherichia coli, GI1786741, Length=284, Percent_Identity=45.7746478873239, Blast_Score=234, Evalue=4e-63, Organism=Caenorhabditis elegans, GI17568735, Length=260, Percent_Identity=38.8461538461538, Blast_Score=167, Evalue=8e-42, Organism=Saccharomyces cerevisiae, GI6319558, Length=283, Percent_Identity=41.696113074205, Blast_Score=209, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6321643, Length=293, Percent_Identity=39.5904436860068, Blast_Score=194, Evalue=2e-50, Organism=Drosophila melanogaster, GI17136816, Length=301, Percent_Identity=43.5215946843854, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI17136818, Length=301, Percent_Identity=43.5215946843854, Blast_Score=208, Evalue=3e-54, Organism=Drosophila melanogaster, GI62472483, Length=284, Percent_Identity=44.0140845070423, Blast_Score=208, Evalue=4e-54, Organism=Drosophila melanogaster, GI45551871, Length=284, Percent_Identity=44.0140845070423, Blast_Score=208, Evalue=4e-54, Organism=Drosophila melanogaster, GI24645718, Length=284, Percent_Identity=44.0140845070423, Blast_Score=208, Evalue=4e-54, Organism=Drosophila melanogaster, GI17137370, Length=284, Percent_Identity=44.0140845070423, Blast_Score=208, Evalue=4e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_PROM3 (A2C873)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001016948.1 - ProteinModelPortal: A2C873 - SMR: A2C873 - STRING: A2C873 - GeneID: 4778825 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_09321 - eggNOG: COG0190 - HOGENOM: HBG328751 - OMA: DVVYETA - ProtClustDB: PRK14186 - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 31453; Mature: 31322
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRLDGKQLAAELEQRLQAEIAAGLVQAGRPPGLAVVRIGDDPASGVYVANKQKACGRI CEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCHHHHHHC GMASYLSHLPAKVPAAEVLATIQSLNLDERVDGILLQLPLPKGLDEGPLLAAIDPEKDAD CHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHCCEEEEECCCCCCCCCCEEEEECCCCCCC GLHTLNLGRLLKGEPGPRSCTPGGVMALLARHQIPLAGKRAVVIGRSILVGQPMALMLQA CCEEECHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECHHHHCCCHHHHEEC ANATVSVAHSHTDDLASLTQQADVLVVAAGRARMIGSEHVKPGAVVVDVGIHRLPADPEL CCCEEEEECCCHHHHHHHHHHCCEEEEECCCHHHCCCCCCCCCEEEEECCCCCCCCCCCC GPQVKARLCGDVRAQEVEPLASALTPVPGGVGPMTVTMLLVNTVARWQQHCGLPFGLRDL CHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH LV CC >Mature Secondary Structure ALRLDGKQLAAELEQRLQAEIAAGLVQAGRPPGLAVVRIGDDPASGVYVANKQKACGRI EEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCHHHHHHC GMASYLSHLPAKVPAAEVLATIQSLNLDERVDGILLQLPLPKGLDEGPLLAAIDPEKDAD CHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHCCEEEEECCCCCCCCCCEEEEECCCCCCC GLHTLNLGRLLKGEPGPRSCTPGGVMALLARHQIPLAGKRAVVIGRSILVGQPMALMLQA CCEEECHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECHHHHCCCHHHHEEC ANATVSVAHSHTDDLASLTQQADVLVVAAGRARMIGSEHVKPGAVVVDVGIHRLPADPEL CCCEEEEECCCHHHHHHHHHHCCEEEEECCCHHHCCCCCCCCCEEEEECCCCCCCCCCCC GPQVKARLCGDVRAQEVEPLASALTPVPGGVGPMTVTMLLVNTVARWQQHCGLPFGLRDL CHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH LV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA