| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is penP
Identifier: 124022606
GI number: 124022606
Start: 813200
End: 814360
Strand: Reverse
Name: penP
Synonym: P9303_08971
Alternate gene names: NA
Gene position: 814360-813200 (Counterclockwise)
Preceding gene: 124022607
Following gene: 124022605
Centisome position: 30.36
GC content: 55.38
Gene sequence:
>1161_bases TTGTCAAGCAACCGCCCTTACCGCAACCGCTCAAACGGGGCTGGTCCCCTACGGCTTTTGTTGCGTTTGATCTTGATGGG CATCGGCCTCGGCGTGATTACAGGTTCAGCGCTCAAGATGCTCGGCCCACAGGTGAAGCAGGGCAAGCTGGACTTGCCGG AGTGGCTTCCTGGGCGAAATTGGATTTCCCTGAAGGTCCTCCCCAGTCGCTTCAACATGGTTGAGGAAGCCACAAACCCC ATGATCAGCAATGGGAATAGTTTGCAAATGGGCAACTTCCAGACGAAGCAAGAACTCACAACGTTGAGCAACCGCTGGAA AGATCTGGCCAAGCAACAGAAAGACTTACAAGCAAGCGCATTCTTGCTAGTGCTTGATGACGGACGCTATGCCGAGCTCT CCCCAGAGACAGCACTGCCTGCAGCTAGCTCGATCAAAACAGCAATCCTGCTGGTAGCTCTCGAACTCATCGATTCCGGT CAGCTCAGCTGGAATGAACCCCTGAAGCTCACCAAAGAGATTATTGGTGGTGGTGCTGGATGGATGGCCAGCAAGCCGCT TGGCAGCCAATTCCCTGCCCACGAAGTTGCCACCGAGATGATTCGGGTGAGCGATAACACCGCCACCAATCTGCTGATTC AACGCATTGGTGGCAAGGACGTCCTCAATGCACGCTTCAATGCTCTAGGCCTGAGCTCCACGGTGGTGAATAACTGGTTA CCGGATCTACAAGGCACCAATACCACCAGCAGCCACGATCTGGCACGGGCCATCGCACTGGTCGATACTGGCAAAGCCCT TAGCCCACGCACACGGGATCTATTCAGGGAGGCAATGAGCACCTCCGTCAGCAACCGCCTATTACCTGGTGGATTTCTCA AGGGACTGGGCGGTAAGCAAGGAGAGCCTGACAACAGCCTCCTGGCAAAGGGCTACCGCATCTACAACAAAACCGGCGAC ATCGGCATCGCTTATGCGGATGCCGGCCTGATCGAACTACCTGATGGCAGTCGTGCAGTGGCAGGGTTCATGGTGAAAGG CCCCTTCAACGACCCCCGCTCCACAGAACTGATCCGCGACATGGCCGCCGCTATGGCTCCAGTACTCAAGCCAAAACCAT CGACACCTCGAACGGAATCAACAAAAAGCAATCAGCCATGA
Upstream 100 bases:
>100_bases CGAGGAAGTAGCCCTGCTGAGAGGGATGGTGAGGCAACTGCGCTGGGCTATCCATTCTCGTCACTCTTAACCTCAGCCGA ACTCACTGATCTTCACTTCC
Downstream 100 bases:
>100_bases AGATCCGCGCCCTTTTGTCAGTTGCGCTTTTCACCGTATTCGGAGCAGTTATTTACACCCCTGCTCTCATTTCCGCACCA ACCGTAAAGCAAAGACAGCA
Product: beta-lactamase
Products: substituted beta-amino acid
Alternate protein names: Beta-Lactamase Family Protein; Beta-Lactamase Class A; Carboxylesterase; Beta-Lactamase Protein; Beta-Lactamase Class A-Like Protein; Carboxylesterase Beta-Lactamase Family Protein
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSSNRPYRNRSNGAGPLRLLLRLILMGIGLGVITGSALKMLGPQVKQGKLDLPEWLPGRNWISLKVLPSRFNMVEEATNP MISNGNSLQMGNFQTKQELTTLSNRWKDLAKQQKDLQASAFLLVLDDGRYAELSPETALPAASSIKTAILLVALELIDSG QLSWNEPLKLTKEIIGGGAGWMASKPLGSQFPAHEVATEMIRVSDNTATNLLIQRIGGKDVLNARFNALGLSSTVVNNWL PDLQGTNTTSSHDLARAIALVDTGKALSPRTRDLFREAMSTSVSNRLLPGGFLKGLGGKQGEPDNSLLAKGYRIYNKTGD IGIAYADAGLIELPDGSRAVAGFMVKGPFNDPRSTELIRDMAAAMAPVLKPKPSTPRTESTKSNQP
Sequences:
>Translated_386_residues MSSNRPYRNRSNGAGPLRLLLRLILMGIGLGVITGSALKMLGPQVKQGKLDLPEWLPGRNWISLKVLPSRFNMVEEATNP MISNGNSLQMGNFQTKQELTTLSNRWKDLAKQQKDLQASAFLLVLDDGRYAELSPETALPAASSIKTAILLVALELIDSG QLSWNEPLKLTKEIIGGGAGWMASKPLGSQFPAHEVATEMIRVSDNTATNLLIQRIGGKDVLNARFNALGLSSTVVNNWL PDLQGTNTTSSHDLARAIALVDTGKALSPRTRDLFREAMSTSVSNRLLPGGFLKGLGGKQGEPDNSLLAKGYRIYNKTGD IGIAYADAGLIELPDGSRAVAGFMVKGPFNDPRSTELIRDMAAAMAPVLKPKPSTPRTESTKSNQP >Mature_385_residues SSNRPYRNRSNGAGPLRLLLRLILMGIGLGVITGSALKMLGPQVKQGKLDLPEWLPGRNWISLKVLPSRFNMVEEATNPM ISNGNSLQMGNFQTKQELTTLSNRWKDLAKQQKDLQASAFLLVLDDGRYAELSPETALPAASSIKTAILLVALELIDSGQ LSWNEPLKLTKEIIGGGAGWMASKPLGSQFPAHEVATEMIRVSDNTATNLLIQRIGGKDVLNARFNALGLSSTVVNNWLP DLQGTNTTSSHDLARAIALVDTGKALSPRTRDLFREAMSTSVSNRLLPGGFLKGLGGKQGEPDNSLLAKGYRIYNKTGDI GIAYADAGLIELPDGSRAVAGFMVKGPFNDPRSTELIRDMAAAMAPVLKPKPSTPRTESTKSNQP
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.2.6
Molecular weight: Translated: 41583; Mature: 41452
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNRPYRNRSNGAGPLRLLLRLILMGIGLGVITGSALKMLGPQVKQGKLDLPEWLPGRN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC WISLKVLPSRFNMVEEATNPMISNGNSLQMGNFQTKQELTTLSNRWKDLAKQQKDLQASA EEEEEECCHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEE FLLVLDDGRYAELSPETALPAASSIKTAILLVALELIDSGQLSWNEPLKLTKEIIGGGAG EEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC WMASKPLGSQFPAHEVATEMIRVSDNTATNLLIQRIGGKDVLNARFNALGLSSTVVNNWL CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCC PDLQGTNTTSSHDLARAIALVDTGKALSPRTRDLFREAMSTSVSNRLLPGGFLKGLGGKQ CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCC GEPDNSLLAKGYRIYNKTGDIGIAYADAGLIELPDGSRAVAGFMVKGPFNDPRSTELIRD CCCCHHHHHCCEEEEECCCCEEEEEECCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHH MAAAMAPVLKPKPSTPRTESTKSNQP HHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSNRPYRNRSNGAGPLRLLLRLILMGIGLGVITGSALKMLGPQVKQGKLDLPEWLPGRN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC WISLKVLPSRFNMVEEATNPMISNGNSLQMGNFQTKQELTTLSNRWKDLAKQQKDLQASA EEEEEECCHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEE FLLVLDDGRYAELSPETALPAASSIKTAILLVALELIDSGQLSWNEPLKLTKEIIGGGAG EEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC WMASKPLGSQFPAHEVATEMIRVSDNTATNLLIQRIGGKDVLNARFNALGLSSTVVNNWL CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCC PDLQGTNTTSSHDLARAIALVDTGKALSPRTRDLFREAMSTSVSNRLLPGGFLKGLGGKQ CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCC GEPDNSLLAKGYRIYNKTGDIGIAYADAGLIELPDGSRAVAGFMVKGPFNDPRSTELIRD CCCCHHHHHCCEEEEECCCCEEEEEECCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHH MAAAMAPVLKPKPSTPRTESTKSNQP HHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-lactam; H2O
Specific reaction: A beta-lactam + H2O = a substituted beta-amino acid
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA