Click here to switch to the map view.

The map label for this gene is infA [H]

Identifier: 124022564

GI number: 124022564

Start: 774194

End: 774523

Strand: Direct

Name: infA [H]

Synonym: P9303_08551

Alternate gene names: 124022564

Gene position: 774194-774523 (Clockwise)

Preceding gene: 124022562

Following gene: 124022567

Centisome position: 28.86

GC content: 55.15

Gene sequence:

>330_bases
GTGTTTGCAGGGGGCTGCAACCTAAACTCCGATTTAACCAATGAGCCACGGCACAACCGCATGATCGAAACCTCGGGTGT
GATTGAGAAGGAACAAGGTAACGGGTTCTATCTGGTCACCCTTGAGCAGCCCGCCGGTCATAAGTGTTTATGTCGTGCCG
CCGGCAAGCTCACCAAGTTCCGCATCAAATTGCTCGCTGGTGACAAGGTGCTGGTGGAGATCAGTCCCTATGACCTCACT
CGAGGTAGAATCACTTATCGAGAGCGAAATGCTGGAGCCCCAGGGGGGCGTCCAGGTGGAAATCGCCCTGGTGGCCCAAG
ACGACGTTAA

Upstream 100 bases:

>100_bases
TCAATAGAGATGAGTCATCCTTTAAGCCTGAGTCTTAACGGTGGACCATCATGGAGCGTGGCGAAATGACAATCGGCCCT
AGAGACTGTTTGACTCTGCC

Downstream 100 bases:

>100_bases
TCAGCTTCATAAGAATATATGGGCTGGATTTGAATCCTTGATAAGGGTTGACACTGCTGCTTTGTTAGCCTTTGCTACTT
CAATTTTGATTTGATAATGA

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MFAGGCNLNSDLTNEPRHNRMIETSGVIEKEQGNGFYLVTLEQPAGHKCLCRAAGKLTKFRIKLLAGDKVLVEISPYDLT
RGRITYRERNAGAPGGRPGGNRPGGPRRR

Sequences:

>Translated_109_residues
MFAGGCNLNSDLTNEPRHNRMIETSGVIEKEQGNGFYLVTLEQPAGHKCLCRAAGKLTKFRIKLLAGDKVLVEISPYDLT
RGRITYRERNAGAPGGRPGGNRPGGPRRR
>Mature_109_residues
MFAGGCNLNSDLTNEPRHNRMIETSGVIEKEQGNGFYLVTLEQPAGHKCLCRAAGKLTKFRIKLLAGDKVLVEISPYDLT
RGRITYRERNAGAPGGRPGGNRPGGPRRR

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3 [H]

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368 [H]

Pfam domain/function: PF01176 eIF-1a [H]

EC number: NA

Molecular weight: Translated: 11951; Mature: 11951

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAGGCNLNSDLTNEPRHNRMIETSGVIEKEQGNGFYLVTLEQPAGHKCLCRAAGKLTKF
CCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCEEEEEECCCCCCEEEEHHCCCCEEE
RIKLLAGDKVLVEISPYDLTRGRITYRERNAGAPGGRPGGNRPGGPRRR
EEEEEECCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFAGGCNLNSDLTNEPRHNRMIETSGVIEKEQGNGFYLVTLEQPAGHKCLCRAAGKLTKF
CCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCEEEEEECCCCCCEEEEHHCCCCEEE
RIKLLAGDKVLVEISPYDLTRGRITYRERNAGAPGGRPGGNRPGGPRRR
EEEEEECCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA