| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022540
Identifier: 124022540
GI number: 124022540
Start: 756821
End: 757393
Strand: Direct
Name: 124022540
Synonym: P9303_08311
Alternate gene names: NA
Gene position: 756821-757393 (Clockwise)
Preceding gene: 124022539
Following gene: 124022547
Centisome position: 28.21
GC content: 46.77
Gene sequence:
>573_bases ATGCCTTCCCTTCAAAGCGTTCCAGATGTCACCTTCAAGACTCGCGTGCGCGATGAATCTGTGCCCGGGCCTAATCCATT CCGCTGGCAAGACCTGACTAGTGCTGAAATCTTTAAGGGGCGCAAGGTGGTGGTGTTAGCCCTACCAGGTGCTTTTACGC CTACGTGCTCATCCAATCATTTGCCACGTTATGAGGAGTTGCATACAGAACTTGTTGCCCAAGGTGTTGATCAGATTATC TGTCTTTCAGTGAATGATGCTTTTGTAATGTTCCAGTGGCGCAAACATTTGGGCACTAAGAATATCTTTATGCTCCCTGA TGGAAATGGAGAGTTCACTCGTAAAATGGGCATGCTTGTTGAGAAATCCAACCTAGGCTTTGGTTTGCGTTCCTGGCGCT ATTCGATGCTAGTGAATGATTGTAATATTGAAAAAATGTTTGTTGAGCCTGGCTTTAGTGATAATGCTGATGTTGACCCG TTTGAGGTCTCTGATGCCGATACGATGCTCGCTTACATGAAGGGTGTGCAACCAGCTGGTGTTAGTTCACCGCGCCGTAA GTTTGAGGGTTAA
Upstream 100 bases:
>100_bases GATCGATTCACGCCGTCGGCGATAGGTTTCAACAATTTGATCATTTGACAAGATCAGATGAGGTGTATGAGATTTTGTTT GCATCAACATCAGCCTTTCA
Downstream 100 bases:
>100_bases AACCTTCACTTCTCACACTCTTGCCTGTTTATTACATATAAAATTGATTATCTGTTTTCCTACTCCCCTCTATATCTTAC ATAACAAGTAGCAATCCTCT
Product: peroxiredoxin
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MPSLQSVPDVTFKTRVRDESVPGPNPFRWQDLTSAEIFKGRKVVVLALPGAFTPTCSSNHLPRYEELHTELVAQGVDQII CLSVNDAFVMFQWRKHLGTKNIFMLPDGNGEFTRKMGMLVEKSNLGFGLRSWRYSMLVNDCNIEKMFVEPGFSDNADVDP FEVSDADTMLAYMKGVQPAGVSSPRRKFEG
Sequences:
>Translated_190_residues MPSLQSVPDVTFKTRVRDESVPGPNPFRWQDLTSAEIFKGRKVVVLALPGAFTPTCSSNHLPRYEELHTELVAQGVDQII CLSVNDAFVMFQWRKHLGTKNIFMLPDGNGEFTRKMGMLVEKSNLGFGLRSWRYSMLVNDCNIEKMFVEPGFSDNADVDP FEVSDADTMLAYMKGVQPAGVSSPRRKFEG >Mature_189_residues PSLQSVPDVTFKTRVRDESVPGPNPFRWQDLTSAEIFKGRKVVVLALPGAFTPTCSSNHLPRYEELHTELVAQGVDQIIC LSVNDAFVMFQWRKHLGTKNIFMLPDGNGEFTRKMGMLVEKSNLGFGLRSWRYSMLVNDCNIEKMFVEPGFSDNADVDPF EVSDADTMLAYMKGVQPAGVSSPRRKFEG
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=119, Percent_Identity=43.6974789915966, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI78706776, Length=153, Percent_Identity=35.9477124183007, Blast_Score=100, Evalue=5e-22, Organism=Drosophila melanogaster, GI78709078, Length=153, Percent_Identity=35.9477124183007, Blast_Score=100, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013740 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 21356; Mature: 21225
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLQSVPDVTFKTRVRDESVPGPNPFRWQDLTSAEIFKGRKVVVLALPGAFTPTCSSNH CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCCCC LPRYEELHTELVAQGVDQIICLSVNDAFVMFQWRKHLGTKNIFMLPDGNGEFTRKMGMLV CCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHCCCCEEEEEECCCCHHHHHHHHEE EKSNLGFGLRSWRYSMLVNDCNIEKMFVEPGFSDNADVDPFEVSDADTMLAYMKGVQPAG EECCCCCCHHHEEEEEEEECCCCEEEEECCCCCCCCCCCCEECCCHHHHHHHHHCCCCCC VSSPRRKFEG CCCCHHHCCC >Mature Secondary Structure PSLQSVPDVTFKTRVRDESVPGPNPFRWQDLTSAEIFKGRKVVVLALPGAFTPTCSSNH CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCCCC LPRYEELHTELVAQGVDQIICLSVNDAFVMFQWRKHLGTKNIFMLPDGNGEFTRKMGMLV CCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHCCCCEEEEEECCCCHHHHHHHHEE EKSNLGFGLRSWRYSMLVNDCNIEKMFVEPGFSDNADVDPFEVSDADTMLAYMKGVQPAG EECCCCCCHHHEEEEEEEECCCCEEEEECCCCCCCCCCCCEECCCHHHHHHHHHCCCCCC VSSPRRKFEG CCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]