| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is gloB
Identifier: 124022531
GI number: 124022531
Start: 747195
End: 747977
Strand: Reverse
Name: gloB
Synonym: P9303_08221
Alternate gene names: 124022531
Gene position: 747977-747195 (Counterclockwise)
Preceding gene: 124022535
Following gene: 124022529
Centisome position: 27.88
GC content: 52.62
Gene sequence:
>783_bases ATGGAGGCAACCTCAACAGCTGCGACTAGCGATAAACAACGTTCATCGATCCATGCCCTTCCTGTTCTTCAGGACAACAT CATCTGGATCTGGATTAAAGGCGACCAAGCTGTCGTTGTGGATCCAGCAATCGCAGAACCAGTCAAGACATGGCTGCAAA CTCGAAAGCTCTCACTCGCAGCAGTACTTCAGACCCATCACCATGCTGATCACATTGGTGGCACCCTTGAGCTGCTTAGG GACTGGCCTAACGCAGCCGTGGTAGCAGCCGCTGACGACCGTGATCGCATTCCGTTCCAGACGATCTCCGTTCGTGATAG AGACAAGATTTCTCTTCTAAACAGCAGTGTTGAGGTGCTCGCCGTTGCGGGTCATACCAGAGCACACATTGCTTATTACC TGCCCACAAACAAGGAAGATCGTGAAGATCCAGCAGTGTTCTGTGGTGACACCCTTTTCGGAGCTGGATGTGGCCGACTG TTTGAAGGAACTGCCGAAGACATGTTCAAGGCTCTTCAACGTCTCTGTTGCCTGCCAGCGAAGACCCGTGTGTATTGCGC TCACGAATACACCGAAGCAAATCTGCGCTGGGCCTCCGCCCTGCATCCAGAAGATATTGCTATCAGCGAACGACTGGTAG ACGTTTCAAGTCGCCGCCAGAGGGGTGCCCTGAGCCTGCCTAGCAGCATTTCAGAAGAACAACGTACCAACCTCTTCGTG CGTGCTCAGAACAGCAAAGAGCTAGCGGAACTTCGCCAACACAAGGATCAATGGCGAAACTAA
Upstream 100 bases:
>100_bases AACCCAGCAGATTGAAAACGAGCAACCGAATCATTCAGCAAAGCTCCTTTTGCAAGCGCGACAGTGATCATGGAGCGATG CGTCGACCTGGACTTTAACG
Downstream 100 bases:
>100_bases GCACAAATATCTGACGCAGCAAGATCAAAATGGCCTGCCCTGGCAAAACTGCTCAGCAACAAGGCAGTCCTGTTCCCTTG GAACAGGACCAACAGCCAGT
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MEATSTAATSDKQRSSIHALPVLQDNIIWIWIKGDQAVVVDPAIAEPVKTWLQTRKLSLAAVLQTHHHADHIGGTLELLR DWPNAAVVAAADDRDRIPFQTISVRDRDKISLLNSSVEVLAVAGHTRAHIAYYLPTNKEDREDPAVFCGDTLFGAGCGRL FEGTAEDMFKALQRLCCLPAKTRVYCAHEYTEANLRWASALHPEDIAISERLVDVSSRRQRGALSLPSSISEEQRTNLFV RAQNSKELAELRQHKDQWRN
Sequences:
>Translated_260_residues MEATSTAATSDKQRSSIHALPVLQDNIIWIWIKGDQAVVVDPAIAEPVKTWLQTRKLSLAAVLQTHHHADHIGGTLELLR DWPNAAVVAAADDRDRIPFQTISVRDRDKISLLNSSVEVLAVAGHTRAHIAYYLPTNKEDREDPAVFCGDTLFGAGCGRL FEGTAEDMFKALQRLCCLPAKTRVYCAHEYTEANLRWASALHPEDIAISERLVDVSSRRQRGALSLPSSISEEQRTNLFV RAQNSKELAELRQHKDQWRN >Mature_260_residues MEATSTAATSDKQRSSIHALPVLQDNIIWIWIKGDQAVVVDPAIAEPVKTWLQTRKLSLAAVLQTHHHADHIGGTLELLR DWPNAAVVAAADDRDRIPFQTISVRDRDKISLLNSSVEVLAVAGHTRAHIAYYLPTNKEDREDPAVFCGDTLFGAGCGRL FEGTAEDMFKALQRLCCLPAKTRVYCAHEYTEANLRWASALHPEDIAISERLVDVSSRRQRGALSLPSSISEEQRTNLFV RAQNSKELAELRQHKDQWRN
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family
Homologues:
Organism=Homo sapiens, GI94538322, Length=266, Percent_Identity=36.0902255639098, Blast_Score=151, Evalue=7e-37, Organism=Homo sapiens, GI94538320, Length=258, Percent_Identity=36.4341085271318, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI116642887, Length=225, Percent_Identity=34.6666666666667, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI14150041, Length=228, Percent_Identity=35.0877192982456, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI21703352, Length=225, Percent_Identity=34.6666666666667, Blast_Score=128, Evalue=4e-30, Organism=Homo sapiens, GI46361987, Length=199, Percent_Identity=36.1809045226131, Blast_Score=115, Evalue=4e-26, Organism=Escherichia coli, GI1786406, Length=232, Percent_Identity=36.2068965517241, Blast_Score=157, Evalue=9e-40, Organism=Caenorhabditis elegans, GI17536925, Length=252, Percent_Identity=33.7301587301587, Blast_Score=145, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6320478, Length=230, Percent_Identity=32.6086956521739, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6324614, Length=181, Percent_Identity=33.1491712707182, Blast_Score=81, Evalue=1e-16, Organism=Drosophila melanogaster, GI21356335, Length=259, Percent_Identity=36.6795366795367, Blast_Score=163, Evalue=9e-41, Organism=Drosophila melanogaster, GI24667711, Length=259, Percent_Identity=36.6795366795367, Blast_Score=163, Evalue=1e-40, Organism=Drosophila melanogaster, GI24667703, Length=259, Percent_Identity=36.6795366795367, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI221330176, Length=166, Percent_Identity=30.1204819277108, Blast_Score=71, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLO2_PROM3 (A2C7W3)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001016838.1 - ProteinModelPortal: A2C7W3 - SMR: A2C7W3 - STRING: A2C7W3 - GeneID: 4777903 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_08221 - eggNOG: COG0491 - HOGENOM: HBG753931 - OMA: WCAHEYT - ProtClustDB: CLSK647185 - HAMAP: MF_01374 - InterPro: IPR001279 - InterPro: IPR017782 - SMART: SM00849 - TIGRFAMs: TIGR03413
Pfam domain/function: PF00753 Lactamase_B
EC number: =3.1.2.6
Molecular weight: Translated: 29082; Mature: 29082
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEATSTAATSDKQRSSIHALPVLQDNIIWIWIKGDQAVVVDPAIAEPVKTWLQTRKLSLA CCCCCCCCCCCHHHCCEEECEEEECCEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHH AVLQTHHHADHIGGTLELLRDWPNAAVVAAADDRDRIPFQTISVRDRDKISLLNSSVEVL HHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHCCCEEEE AVAGHTRAHIAYYLPTNKEDREDPAVFCGDTLFGAGCGRLFEGTAEDMFKALQRLCCLPA EEECCCEEEEEEECCCCCCCCCCCCEEECCCHHCCCCCHHHCCCHHHHHHHHHHHHCCCC KTRVYCAHEYTEANLRWASALHPEDIAISERLVDVSSRRQRGALSLPSSISEEQRTNLFV CCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCEEEE RAQNSKELAELRQHKDQWRN EECCCHHHHHHHHHHHHHCC >Mature Secondary Structure MEATSTAATSDKQRSSIHALPVLQDNIIWIWIKGDQAVVVDPAIAEPVKTWLQTRKLSLA CCCCCCCCCCCHHHCCEEECEEEECCEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHH AVLQTHHHADHIGGTLELLRDWPNAAVVAAADDRDRIPFQTISVRDRDKISLLNSSVEVL HHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHCCCEEEE AVAGHTRAHIAYYLPTNKEDREDPAVFCGDTLFGAGCGRLFEGTAEDMFKALQRLCCLPA EEECCCEEEEEEECCCCCCCCCCCCEEECCCHHCCCCCHHHCCCHHHHHHHHHHHHCCCC KTRVYCAHEYTEANLRWASALHPEDIAISERLVDVSSRRQRGALSLPSSISEEQRTNLFV CCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCEEEE RAQNSKELAELRQHKDQWRN EECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA