Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is lplA [H]

Identifier: 124022497

GI number: 124022497

Start: 722786

End: 723562

Strand: Reverse

Name: lplA [H]

Synonym: P9303_07881

Alternate gene names: 124022497

Gene position: 723562-722786 (Counterclockwise)

Preceding gene: 124022502

Following gene: 124022495

Centisome position: 26.97

GC content: 55.21

Gene sequence:

>777_bases
TTGTCTGGCCCAGAACAGATGGCCCTCGATGAGGTGCTTCTCGAGTCTTACCAAGCAGATGCGAAACCACTGCCAACACT
GCGCTTCTATCAATGGAACGGTCCATGGCTTTCCCTTGGTCGCAACCAACGCCACTGGCCAGAGCACTGGAATGCCCTGG
CCAAACGAGGAGATCTACAGCTGGTTCGGCGACCCAGTGGCGGCAGTGCAGTCCTGCATGCAGGAGGGCTCACTTATGCA
CTGATCTGGCCCTCTCCTCCCCGCCAGAGACAACAAGCCTATAAACAAGCTTGTCAATGGCTCATACGGGGCTTTAAAGA
ACTCGAATTACCTTTGCAATTTGGCGACCACCCTGCCAGGGGGGCCAGAGAAAGTAACTGCTTCGCCACAGCCACAGCCG
CTGATCTTGTGGATTCTCAGGGTCACAAACGCATCGGCAGTGCCCAACTCTGGCGTCAGGGTCATCTCCTTCAACATGGC
GAAATCATCCTCAATCCCCCTCAAAGACTCTGGCGAGAGGTCTTCGATTGCGAACCACCCAGCCAAGCACCAGCATCAAT
CCCAAGGCAAGAGCTGAGCCATCACCTGCAAACAACGTTTTGCTCCTGTTGGCCAGAGGTGAGCTGGCAAGAGAGCCCTA
TCACCAGCGATGAATGGAGCTCAGTTGCCAACGAAGCAGCGAACTATGAAGTACTGCTGGATGCCTCAGGCTGCTCAACC
AATCCGCCAGAGATCATCGACTCCACAACTTTAGGCAGTGCCATACCCAGGGGATAG

Upstream 100 bases:

>100_bases
ACACCAGCAAATCCCACAACACCATCACTGCTCTATGCCGACAGCTGCATCCTGCCTACCTATCTCGCCAGGTCGCGGCC
GCTTGATCTCCCCTTTGCAA

Downstream 100 bases:

>100_bases
GTGTTCTGACGGCGAGCAGCTTCGAGAAACTGAGCAGGAAGCCTTACCCCAAGACGCTTAAGAACAGCTTCGGAGAGATC
AATTCGATCTAATGTTCCGC

Product: biotin/lipoate A/B protein ligase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSGPEQMALDEVLLESYQADAKPLPTLRFYQWNGPWLSLGRNQRHWPEHWNALAKRGDLQLVRRPSGGSAVLHAGGLTYA
LIWPSPPRQRQQAYKQACQWLIRGFKELELPLQFGDHPARGARESNCFATATAADLVDSQGHKRIGSAQLWRQGHLLQHG
EIILNPPQRLWREVFDCEPPSQAPASIPRQELSHHLQTTFCSCWPEVSWQESPITSDEWSSVANEAANYEVLLDASGCST
NPPEIIDSTTLGSAIPRG

Sequences:

>Translated_258_residues
MSGPEQMALDEVLLESYQADAKPLPTLRFYQWNGPWLSLGRNQRHWPEHWNALAKRGDLQLVRRPSGGSAVLHAGGLTYA
LIWPSPPRQRQQAYKQACQWLIRGFKELELPLQFGDHPARGARESNCFATATAADLVDSQGHKRIGSAQLWRQGHLLQHG
EIILNPPQRLWREVFDCEPPSQAPASIPRQELSHHLQTTFCSCWPEVSWQESPITSDEWSSVANEAANYEVLLDASGCST
NPPEIIDSTTLGSAIPRG
>Mature_257_residues
SGPEQMALDEVLLESYQADAKPLPTLRFYQWNGPWLSLGRNQRHWPEHWNALAKRGDLQLVRRPSGGSAVLHAGGLTYAL
IWPSPPRQRQQAYKQACQWLIRGFKELELPLQFGDHPARGARESNCFATATAADLVDSQGHKRIGSAQLWRQGHLLQHGE
IILNPPQRLWREVFDCEPPSQAPASIPRQELSHHLQTTFCSCWPEVSWQESPITSDEWSSVANEAANYEVLLDASGCSTN
PPEIIDSTTLGSAIPRG

Specific function: Unknown

COG id: COG0095

COG function: function code H; Lipoate-protein ligase A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004143 [H]

Pfam domain/function: PF03099 BPL_LipA_LipB [H]

EC number: NA

Molecular weight: Translated: 28888; Mature: 28756

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPEQMALDEVLLESYQADAKPLPTLRFYQWNGPWLSLGRNQRHWPEHWNALAKRGDLQ
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHCCCEE
LVRRPSGGSAVLHAGGLTYALIWPSPPRQRQQAYKQACQWLIRGFKELELPLQFGDHPAR
EEECCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
GARESNCFATATAADLVDSQGHKRIGSAQLWRQGHLLQHGEIILNPPQRLWREVFDCEPP
CCCCCCCEEHHHHHHHHHCCCCHHCCHHHHHHCCCCEECCCEEECCHHHHHHHHHCCCCC
SQAPASIPRQELSHHLQTTFCSCWPEVSWQESPITSDEWSSVANEAANYEVLLDASGCST
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCC
NPPEIIDSTTLGSAIPRG
CCHHHHCCCHHCCCCCCC
>Mature Secondary Structure 
SGPEQMALDEVLLESYQADAKPLPTLRFYQWNGPWLSLGRNQRHWPEHWNALAKRGDLQ
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHCCCEE
LVRRPSGGSAVLHAGGLTYALIWPSPPRQRQQAYKQACQWLIRGFKELELPLQFGDHPAR
EEECCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
GARESNCFATATAADLVDSQGHKRIGSAQLWRQGHLLQHGEIILNPPQRLWREVFDCEPP
CCCCCCCEEHHHHHHHHHCCCCHHCCHHHHHHCCCCEECCCEEECCHHHHHHHHHCCCCC
SQAPASIPRQELSHHLQTTFCSCWPEVSWQESPITSDEWSSVANEAANYEVLLDASGCST
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCC
NPPEIIDSTTLGSAIPRG
CCHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]