| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is yfiH [C]
Identifier: 124022482
GI number: 124022482
Start: 711947
End: 712801
Strand: Reverse
Name: yfiH [C]
Synonym: P9303_07731
Alternate gene names: 124022482
Gene position: 712801-711947 (Counterclockwise)
Preceding gene: 124022483
Following gene: 124022479
Centisome position: 26.57
GC content: 54.85
Gene sequence:
>855_bases ATGACATCGCTGGGGCAGGCAGCGGAAACTGACAAACAAGACCCGCTTGCCACTCCAGATACCCTGTTTAACCAACTCAA AGGATGGACCTGGGTAGGTTGCTATGGGGGCTACTACCTGCAGGCCGACCTTCTACAAAAGGCTGGTTTCGAACATGGAT TCTTCACGCGACGCTGGCAAGATCGAGGCCCCGATCAACTAGCTGGTTACCTAAGCGCAGGCATTAGCGTTCATAGACCC CAACAAGTTCATGGCGGCAGGGTGCTCGAAGCCTCACAAGCCAACCGCCCACCCTGGCCGGAAGCTGATGGCCTCGTCAG CGACAGGGGTGGACAAAGTCTCTGGGTCTGCACTGCCGACTGCACTCCAGTACTGATTGCCGACCACTCGACAGGACATG CAGCAGCATGTCATGTGGGCTGGCGAGGCTTAACCGCCAAAATCCTGCAGGAAGCTCTAGCAAAGCTGGAATCTCGAGGA GCAAAAATCGAGACTCTGCTTGTTGCTCTAGGACCAGCTGTGAGCGGTTCCAACTATCAGATTCAAATTGATGTTGCCGA AGCTGTGGCAAAGAGCCTCGAAGCAGATCCAAACAACCCACCAATCCAGCTGGAAAAACGGCTCTCCGCGCTAAAAGAAC GAGGCATTCTCGATGCAGAAAAAGAGCCACAGCAACTGCGTCTCGACATTCGCTTGGCTGCTGCTGACCAACTAAAACGA GCTGGGTTAAGCAGCGAGCAGATCAGCAGTTGCCCGCTATGCACAGTGGCAGAGTCCAGCCTCTTTTACTCATGGCGCAG GGACCACGTCAAAGCCGTGCAGTGGAGTGGAATCGTCGCTCAAGCTGGAGAATGA
Upstream 100 bases:
>100_bases CAAGAGAGCAAGCCGGCGGGCTGCAATTCATCTCTGTGCAGACCTCCCCAGAAGAAAAACGATTTGCTGGTTTCTGGATG CTGCGTGACCTGCCGCAACC
Downstream 100 bases:
>100_bases ACAACCACAAGCTGTTTCGCCAGGGCTTCTGCAGCCCTAATCCCATCGATGCCAGCCGAAAGGATGCCTCCGGCATAACC AGCCCCTTCTCCAGCAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTSLGQAAETDKQDPLATPDTLFNQLKGWTWVGCYGGYYLQADLLQKAGFEHGFFTRRWQDRGPDQLAGYLSAGISVHRP QQVHGGRVLEASQANRPPWPEADGLVSDRGGQSLWVCTADCTPVLIADHSTGHAAACHVGWRGLTAKILQEALAKLESRG AKIETLLVALGPAVSGSNYQIQIDVAEAVAKSLEADPNNPPIQLEKRLSALKERGILDAEKEPQQLRLDIRLAAADQLKR AGLSSEQISSCPLCTVAESSLFYSWRRDHVKAVQWSGIVAQAGE
Sequences:
>Translated_284_residues MTSLGQAAETDKQDPLATPDTLFNQLKGWTWVGCYGGYYLQADLLQKAGFEHGFFTRRWQDRGPDQLAGYLSAGISVHRP QQVHGGRVLEASQANRPPWPEADGLVSDRGGQSLWVCTADCTPVLIADHSTGHAAACHVGWRGLTAKILQEALAKLESRG AKIETLLVALGPAVSGSNYQIQIDVAEAVAKSLEADPNNPPIQLEKRLSALKERGILDAEKEPQQLRLDIRLAAADQLKR AGLSSEQISSCPLCTVAESSLFYSWRRDHVKAVQWSGIVAQAGE >Mature_283_residues TSLGQAAETDKQDPLATPDTLFNQLKGWTWVGCYGGYYLQADLLQKAGFEHGFFTRRWQDRGPDQLAGYLSAGISVHRPQ QVHGGRVLEASQANRPPWPEADGLVSDRGGQSLWVCTADCTPVLIADHSTGHAAACHVGWRGLTAKILQEALAKLESRGA KIETLLVALGPAVSGSNYQIQIDVAEAVAKSLEADPNNPPIQLEKRLSALKERGILDAEKEPQQLRLDIRLAAADQLKRA GLSSEQISSCPLCTVAESSLFYSWRRDHVKAVQWSGIVAQAGE
Specific function: Unknown
COG id: COG1496
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0124 family [H]
Homologues:
Organism=Escherichia coli, GI1788945, Length=190, Percent_Identity=31.0526315789474, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003730 - InterPro: IPR011324 [H]
Pfam domain/function: PF02578 Cu-oxidase_4 [H]
EC number: NA
Molecular weight: Translated: 30819; Mature: 30688
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLGQAAETDKQDPLATPDTLFNQLKGWTWVGCYGGYYLQADLLQKAGFEHGFFTRRWQ CCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEEHHHHHHHCCCCCCCCCHHHC DRGPDQLAGYLSAGISVHRPQQVHGGRVLEASQANRPPWPEADGLVSDRGGQSLWVCTAD CCCHHHHHHHHHCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCCCEECCCCCEEEEEECC CTPVLIADHSTGHAAACHVGWRGLTAKILQEALAKLESRGAKIETLLVALGPAVSGSNYQ CCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEE IQIDVAEAVAKSLEADPNNPPIQLEKRLSALKERGILDAEKEPQQLRLDIRLAAADQLKR EEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHH AGLSSEQISSCPLCTVAESSLFYSWRRDHVKAVQWSGIVAQAGE CCCCHHHHCCCCCCEEHHHHHHHHHHHHHHHEEEECCEEECCCC >Mature Secondary Structure TSLGQAAETDKQDPLATPDTLFNQLKGWTWVGCYGGYYLQADLLQKAGFEHGFFTRRWQ CCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEEHHHHHHHCCCCCCCCCHHHC DRGPDQLAGYLSAGISVHRPQQVHGGRVLEASQANRPPWPEADGLVSDRGGQSLWVCTAD CCCHHHHHHHHHCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCCCEECCCCCEEEEEECC CTPVLIADHSTGHAAACHVGWRGLTAKILQEALAKLESRGAKIETLLVALGPAVSGSNYQ CCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEE IQIDVAEAVAKSLEADPNNPPIQLEKRLSALKERGILDAEKEPQQLRLDIRLAAADQLKR EEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHH AGLSSEQISSCPLCTVAESSLFYSWRRDHVKAVQWSGIVAQAGE CCCCHHHHCCCCCCEEHHHHHHHHHHHHHHHEEEECCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]