| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is tal [H]
Identifier: 124022466
GI number: 124022466
Start: 697537
End: 698709
Strand: Direct
Name: tal [H]
Synonym: P9303_07571
Alternate gene names: 124022466
Gene position: 697537-698709 (Clockwise)
Preceding gene: 124022465
Following gene: 124022467
Centisome position: 26.0
GC content: 47.57
Gene sequence:
>1173_bases ATGGCCACACTCCTTGAGCAGCTTTCCACCATGACCGTGGTCGTGGCGGATACCGGTGATTTGGACGCCATTAGAAAGTT CACCCCCAGGGATGCAACGACCAACCCTTCATTGATCCTTGCGGCGGCGCAGATTCCTGCTTATCAGAGTTTGATCGATG AGGCTCTTCATTCCTCCCGTCAGTTATTGGGCAGCTCTGCAGCTGTGGAGGAGGTGGTCCATGAGGCTCTCGATGAAATT TGTGTAATCTTTGGAAAGGAAATCCTCAAGATTGTTCCTGGCCGTGTTTCCACTGAAGTGGATGCTCGCCTCAGTTTCAA TACTGAAGCCACAATCGCTAAGGCTCACAAACTCATTGGCCTATATAACGACGCTGGCATTACTAATGATCGCGTTTTGA TCAAGATAGCTTCTACTTGGGAGGGTATAAAAGCGGCTGAGGTTTTGGAGAAAGATGGAATTCATTGCAACTTAACTCTG CTATTTGGCTTTTCTCAGGCTGTCGCTTGTGCAGAAGCAGGAGTCACTTTGATCTCTCCTTTTGTTGGGCGAATCCTTGA TTGGTACAAGGCTTCTACTGGTCGGGATTCTTATACAGGTCCAGAAGATCCTGGTGTGATCTCGGTGACCAAGATCTTTA ATTACTTCAAAACCTATGATTACAAGACTGAGATCATGGGCGCGAGTTTCCGCAATCTTGACGAAATTATTGAATTGGCT GGATGTGATTTGTTGACCATCTCACCAAAGCTTTTGGATCAGCTGCGTAGTACAGAGGCTCCGCTGATGCGTAAGTTGGA TGCTGTCAATCCTGTTGCTGCAGAGTCTCAGATCCATGTCGATAAGGAGAGTTTTGAGTCAATGATGAGGGCTGATCGCA TGGCTTTTGAGAAGTTGGATGAAGGGATTCGCGGCTTTAGCAAGGCGATTGAAACTCTTGAGGCTCAGTTGGCGCATCGA TTAGCTGTTTTGGAGGGAGGAGCGGCTTTCTGCCATGTTGTTCAGGAGATTTTCATGCTCAATGATCTCGATGGTGATGG TTGTATTACTAGAGAAGAATGGCTCGGTAGTGATGCGGTATTTGACGCCTTAGATCATGACCATGATGGCCGACTTCTTC AGGAAGATGTTCGTTCTGGGCTGGGTGCTGCGTTGGCACTAACAACAGCTTAA
Upstream 100 bases:
>100_bases AAGGCTAAGTCTTGGCAAAGCTTCGATGGTGAGTTCTGAACCTGGGCTGTCAGCAAAAAAAACGCCGCTAGCTTAAAGAT CTTGCGAGACGTTCTGCTTT
Downstream 100 bases:
>100_bases AGTCTCGCTGAATAAGGGAATGAGTCTTTCCGTTATCAATGCTTTCCCATGGCAGTAATTAGCTAAAAGACATAGAACGT TTGGTCTTATTGAAGTCTCT
Product: transaldolase/EF-hand domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MATLLEQLSTMTVVVADTGDLDAIRKFTPRDATTNPSLILAAAQIPAYQSLIDEALHSSRQLLGSSAAVEEVVHEALDEI CVIFGKEILKIVPGRVSTEVDARLSFNTEATIAKAHKLIGLYNDAGITNDRVLIKIASTWEGIKAAEVLEKDGIHCNLTL LFGFSQAVACAEAGVTLISPFVGRILDWYKASTGRDSYTGPEDPGVISVTKIFNYFKTYDYKTEIMGASFRNLDEIIELA GCDLLTISPKLLDQLRSTEAPLMRKLDAVNPVAAESQIHVDKESFESMMRADRMAFEKLDEGIRGFSKAIETLEAQLAHR LAVLEGGAAFCHVVQEIFMLNDLDGDGCITREEWLGSDAVFDALDHDHDGRLLQEDVRSGLGAALALTTA
Sequences:
>Translated_390_residues MATLLEQLSTMTVVVADTGDLDAIRKFTPRDATTNPSLILAAAQIPAYQSLIDEALHSSRQLLGSSAAVEEVVHEALDEI CVIFGKEILKIVPGRVSTEVDARLSFNTEATIAKAHKLIGLYNDAGITNDRVLIKIASTWEGIKAAEVLEKDGIHCNLTL LFGFSQAVACAEAGVTLISPFVGRILDWYKASTGRDSYTGPEDPGVISVTKIFNYFKTYDYKTEIMGASFRNLDEIIELA GCDLLTISPKLLDQLRSTEAPLMRKLDAVNPVAAESQIHVDKESFESMMRADRMAFEKLDEGIRGFSKAIETLEAQLAHR LAVLEGGAAFCHVVQEIFMLNDLDGDGCITREEWLGSDAVFDALDHDHDGRLLQEDVRSGLGAALALTTA >Mature_389_residues ATLLEQLSTMTVVVADTGDLDAIRKFTPRDATTNPSLILAAAQIPAYQSLIDEALHSSRQLLGSSAAVEEVVHEALDEIC VIFGKEILKIVPGRVSTEVDARLSFNTEATIAKAHKLIGLYNDAGITNDRVLIKIASTWEGIKAAEVLEKDGIHCNLTLL FGFSQAVACAEAGVTLISPFVGRILDWYKASTGRDSYTGPEDPGVISVTKIFNYFKTYDYKTEIMGASFRNLDEIIELAG CDLLTISPKLLDQLRSTEAPLMRKLDAVNPVAAESQIHVDKESFESMMRADRMAFEKLDEGIRGFSKAIETLEAQLAHRL AVLEGGAAFCHVVQEIFMLNDLDGDGCITREEWLGSDAVFDALDHDHDGRLLQEDVRSGLGAALALTTA
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 EF-hand domains [H]
Homologues:
Organism=Homo sapiens, GI5803187, Length=329, Percent_Identity=57.7507598784195, Blast_Score=372, Evalue=1e-103, Organism=Escherichia coli, GI1786189, Length=321, Percent_Identity=56.6978193146417, Blast_Score=355, Evalue=3e-99, Organism=Escherichia coli, GI1788807, Length=317, Percent_Identity=52.0504731861199, Blast_Score=315, Evalue=4e-87, Organism=Caenorhabditis elegans, GI25153750, Length=315, Percent_Identity=56.5079365079365, Blast_Score=354, Evalue=4e-98, Organism=Caenorhabditis elegans, GI25153752, Length=159, Percent_Identity=55.9748427672956, Blast_Score=177, Evalue=7e-45, Organism=Caenorhabditis elegans, GI17570473, Length=91, Percent_Identity=47.2527472527472, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323386, Length=317, Percent_Identity=61.5141955835962, Blast_Score=333, Evalue=2e-92, Organism=Saccharomyces cerevisiae, GI6321480, Length=316, Percent_Identity=54.746835443038, Blast_Score=324, Evalue=1e-89, Organism=Drosophila melanogaster, GI45549185, Length=316, Percent_Identity=55.0632911392405, Blast_Score=351, Evalue=4e-97,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011992 - InterPro: IPR018247 - InterPro: IPR018249 - InterPro: IPR001585 - InterPro: IPR004730 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 42464; Mature: 42333
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2 ; PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLLEQLSTMTVVVADTGDLDAIRKFTPRDATTNPSLILAAAQIPAYQSLIDEALHSSR CCHHHHHHHHEEEEEECCCCHHHHHHCCCCCCCCCCCEEEEEHHCHHHHHHHHHHHHHHH QLLGSSAAVEEVVHEALDEICVIFGKEILKIVPGRVSTEVDARLSFNTEATIAKAHKLIG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHE LYNDAGITNDRVLIKIASTWEGIKAAEVLEKDGIHCNLTLLFGFSQAVACAEAGVTLISP EECCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEEEECHHHHHHHHHCCHHHHHH FVGRILDWYKASTGRDSYTGPEDPGVISVTKIFNYFKTYDYKTEIMGASFRNLDEIIELA HHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCHHHHCCCHHCCHHHHHHHH GCDLLTISPKLLDQLRSTEAPLMRKLDAVNPVAAESQIHVDKESFESMMRADRMAFEKLD CCCEEEECHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHH EGIRGFSKAIETLEAQLAHRLAVLEGGAAFCHVVQEIFMLNDLDGDGCITREEWLGSDAV HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHH FDALDHDHDGRLLQEDVRSGLGAALALTTA HHHHCCCCCCCHHHHHHHCCCCCCEEEECC >Mature Secondary Structure ATLLEQLSTMTVVVADTGDLDAIRKFTPRDATTNPSLILAAAQIPAYQSLIDEALHSSR CHHHHHHHHEEEEEECCCCHHHHHHCCCCCCCCCCCEEEEEHHCHHHHHHHHHHHHHHH QLLGSSAAVEEVVHEALDEICVIFGKEILKIVPGRVSTEVDARLSFNTEATIAKAHKLIG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHE LYNDAGITNDRVLIKIASTWEGIKAAEVLEKDGIHCNLTLLFGFSQAVACAEAGVTLISP EECCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEEEECHHHHHHHHHCCHHHHHH FVGRILDWYKASTGRDSYTGPEDPGVISVTKIFNYFKTYDYKTEIMGASFRNLDEIIELA HHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCHHHHCCCHHCCHHHHHHHH GCDLLTISPKLLDQLRSTEAPLMRKLDAVNPVAAESQIHVDKESFESMMRADRMAFEKLD CCCEEEECHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHH EGIRGFSKAIETLEAQLAHRLAVLEGGAAFCHVVQEIFMLNDLDGDGCITREEWLGSDAV HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHH FDALDHDHDGRLLQEDVRSGLGAALALTTA HHHHCCCCCCCHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917642 [H]