| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is phhB
Identifier: 124022422
GI number: 124022422
Start: 662114
End: 662404
Strand: Reverse
Name: phhB
Synonym: P9303_07131
Alternate gene names: NA
Gene position: 662404-662114 (Counterclockwise)
Preceding gene: 124022423
Following gene: 124022421
Centisome position: 24.69
GC content: 54.98
Gene sequence:
>291_bases ATGACGGCAACCCTGCTTACTGCTGAACAGCTCTCTTCCGTAGCTGAAAAGCTGCCGGGGTGGACCCTGGCGGATCAACG GCTGCGACGGCAATGGCGCTTTCGCAACTTTGTGGAAGCCTTCGGTTTTATGACCCGTGTGGCACTGCTAGCTGAAGCCA TGAACCATCACCCGGAATGGAGCAACGTCTATGCCACTGTGACGATCGAGTTGACGACCCATGACGTCAACGGATTGAGC GATCGTGATTTGAAGCTCGCCGAAGCAATCAATTTGCTGGAACCGGGCTAA
Upstream 100 bases:
>100_bases GGACAACATCAAATCACCCTTCAGCCATTGCATCATTAGAGCAACACAACACAGCAACCATCACAGACAAGAATGACTCC AAATCTCACAACACAACCTC
Downstream 100 bases:
>100_bases TCAAAACTCACTCAGCCAAAACTGCTGCCAGCATGGAATCAACGAGCGGCTGTGGTTCCAGCACCCTCCCGCTCCCCTGA CGGCAAGCCCATGAACGACG
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MTATLLTAEQLSSVAEKLPGWTLADQRLRRQWRFRNFVEAFGFMTRVALLAEAMNHHPEWSNVYATVTIELTTHDVNGLS DRDLKLAEAINLLEPG
Sequences:
>Translated_96_residues MTATLLTAEQLSSVAEKLPGWTLADQRLRRQWRFRNFVEAFGFMTRVALLAEAMNHHPEWSNVYATVTIELTTHDVNGLS DRDLKLAEAINLLEPG >Mature_95_residues TATLLTAEQLSSVAEKLPGWTLADQRLRRQWRFRNFVEAFGFMTRVALLAEAMNHHPEWSNVYATVTIELTTHDVNGLSD RDLKLAEAINLLEPG
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family
Homologues:
Organism=Homo sapiens, GI134133240, Length=76, Percent_Identity=52.6315789473684, Blast_Score=87, Evalue=3e-18, Organism=Homo sapiens, GI4557831, Length=92, Percent_Identity=47.8260869565217, Blast_Score=82, Evalue=7e-17, Organism=Caenorhabditis elegans, GI115533705, Length=84, Percent_Identity=54.7619047619048, Blast_Score=93, Evalue=2e-20, Organism=Drosophila melanogaster, GI45549100, Length=80, Percent_Identity=51.25, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHS_PROM3 (A2C7K4)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001016729.1 - ProteinModelPortal: A2C7K4 - SMR: A2C7K4 - STRING: A2C7K4 - GeneID: 4776512 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_07131 - eggNOG: COG2154 - HOGENOM: HBG705804 - OMA: IALICEK - ProtClustDB: PRK00823 - HAMAP: MF_00434 - InterPro: IPR001533 - Gene3D: G3DSA:3.30.1360.20 - PANTHER: PTHR12599
Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh
EC number: =4.2.1.96
Molecular weight: Translated: 10897; Mature: 10765
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATLLTAEQLSSVAEKLPGWTLADQRLRRQWRFRNFVEAFGFMTRVALLAEAMNHHPEW CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SNVYATVTIELTTHDVNGLSDRDLKLAEAINLLEPG CCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure TATLLTAEQLSSVAEKLPGWTLADQRLRRQWRFRNFVEAFGFMTRVALLAEAMNHHPEW CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SNVYATVTIELTTHDVNGLSDRDLKLAEAINLLEPG CCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA