| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022370
Identifier: 124022370
GI number: 124022370
Start: 621996
End: 622706
Strand: Reverse
Name: 124022370
Synonym: P9303_06601
Alternate gene names: NA
Gene position: 622706-621996 (Counterclockwise)
Preceding gene: 124022371
Following gene: 124022368
Centisome position: 23.21
GC content: 47.82
Gene sequence:
>711_bases ATGCCGGAGCACCCTCAGGACTTCTTGAGTGACCAATCCCACTCAGAGCAACTCTCCACACCATTGATTCAAGTTGGCGC GTTGCTTAGAGAAGCCCGCGAAAAACGGGGGTTTTCAATAGCAGAAATCGCGGGAAGTCTTCGAATAGGCAAAGAGCAAC TAATAGCCCTGGAGAATGGAAACAAAGATCTACTACCTGAGCCGGTTTTTATTAGAGCCATGGTGCGCCGGGTCGCCGAG CGACTCAACCTCGATGCGACTGCCCTTGTGCAGCAAATTCAGGTCATCATTCCATCAAGCTCCGAAGCCCTACGCCAATC AAAGAGCAAAGCGTCTCGTCCAAACCTAAAAGTGATACCTGCATTGGCCTTTTTGGGAGGGTTGATTGGATTGACTGCAG CAGGACTAGCCATCACCTATTACAGCAACCCCAACACCTTTACCCGCATCCAAACAAGCATCAACAACGCAATCATTTCA ATCAACAACACTGCCGAAGGCATGATCTTTGGGTCTTCAACTCGTTCAAATGATGTAAAAGATGAGCCTAAGGAAACCGA GCTAATCTCTCAGCCTGCAGATGCAACACCTACCCAAAATTTGCCATCAACATCTCCATCAGAGCTAAAAAAACCAAATA ATAATAATCAACCAGCTTCAACTGAACAGCAAAAAACACAGCCAGGGACCAACCCCAACCCCCAACAGTGA
Upstream 100 bases:
>100_bases AAACCAGGTGATCCCATATACATGGGAACAAATGATGCCTGACAAGCTCAGTGCTTCCAACTAAGGTCAAATGCATGCAG GTCAACACTCCTCTTCCTTA
Downstream 100 bases:
>100_bases AGCTGAGATTATTTTTGAAGGCACCCTTTGCGAGCCGCTTAGCTATCCAGTAGAGGAAGACCTAGAAATCTATACAGGGC ATCCTGATCTGATTCATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MPEHPQDFLSDQSHSEQLSTPLIQVGALLREAREKRGFSIAEIAGSLRIGKEQLIALENGNKDLLPEPVFIRAMVRRVAE RLNLDATALVQQIQVIIPSSSEALRQSKSKASRPNLKVIPALAFLGGLIGLTAAGLAITYYSNPNTFTRIQTSINNAIIS INNTAEGMIFGSSTRSNDVKDEPKETELISQPADATPTQNLPSTSPSELKKPNNNNQPASTEQQKTQPGTNPNPQQ
Sequences:
>Translated_236_residues MPEHPQDFLSDQSHSEQLSTPLIQVGALLREAREKRGFSIAEIAGSLRIGKEQLIALENGNKDLLPEPVFIRAMVRRVAE RLNLDATALVQQIQVIIPSSSEALRQSKSKASRPNLKVIPALAFLGGLIGLTAAGLAITYYSNPNTFTRIQTSINNAIIS INNTAEGMIFGSSTRSNDVKDEPKETELISQPADATPTQNLPSTSPSELKKPNNNNQPASTEQQKTQPGTNPNPQQ >Mature_235_residues PEHPQDFLSDQSHSEQLSTPLIQVGALLREAREKRGFSIAEIAGSLRIGKEQLIALENGNKDLLPEPVFIRAMVRRVAER LNLDATALVQQIQVIIPSSSEALRQSKSKASRPNLKVIPALAFLGGLIGLTAAGLAITYYSNPNTFTRIQTSINNAIISI NNTAEGMIFGSSTRSNDVKDEPKETELISQPADATPTQNLPSTSPSELKKPNNNNQPASTEQQKTQPGTNPNPQQ
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25600; Mature: 25469
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEHPQDFLSDQSHSEQLSTPLIQVGALLREAREKRGFSIAEIAGSLRIGKEQLIALENG CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEEEECC NKDLLPEPVFIRAMVRRVAERLNLDATALVQQIQVIIPSSSEALRQSKSKASRPNLKVIP CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHH ALAFLGGLIGLTAAGLAITYYSNPNTFTRIQTSINNAIISINNTAEGMIFGSSTRSNDVK HHHHHHHHHHHHHHCEEEEEECCCCCHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCC DEPKETELISQPADATPTQNLPSTSPSELKKPNNNNQPASTEQQKTQPGTNPNPQQ CCCHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure PEHPQDFLSDQSHSEQLSTPLIQVGALLREAREKRGFSIAEIAGSLRIGKEQLIALENG CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEEEECC NKDLLPEPVFIRAMVRRVAERLNLDATALVQQIQVIIPSSSEALRQSKSKASRPNLKVIP CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHH ALAFLGGLIGLTAAGLAITYYSNPNTFTRIQTSINNAIISINNTAEGMIFGSSTRSNDVK HHHHHHHHHHHHHHCEEEEEECCCCCHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCC DEPKETELISQPADATPTQNLPSTSPSELKKPNNNNQPASTEQQKTQPGTNPNPQQ CCCHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA