Click here to switch to the map view.

The map label for this gene is ctaC [H]

Identifier: 124022352

GI number: 124022352

Start: 605913

End: 606737

Strand: Reverse

Name: ctaC [H]

Synonym: P9303_06421

Alternate gene names: 124022352

Gene position: 606737-605913 (Counterclockwise)

Preceding gene: 124022358

Following gene: 124022351

Centisome position: 22.62

GC content: 52.73

Gene sequence:

>825_bases
GTGCGGACTCCCTTTGCCATCCTGACGCTGGCGTTGGTCATTGCCCTTGTACTTGGAGGCCTATGGATTGGCCAACACGT
CAATCTGCTCCCTGTTGATGCAAGTGCGAATGCACCCGTATACGACGAACTCTTCCGAGTCCTTTTCAGCATCGGAGCAA
TCCTTTTTCTTGGCATTGTCGGGTTGGTTGTATTCAGCCTGATTAAGTTCCGCAGACGTCCTGGTCAATTGGAGGACGGC
CTCGCCATTGAAGGCAATCTCCCTCTTGAAATCTTTTGGACAGCTGTACCTGCTGTGGTCGTGCTGTTTGTTGGGCTTTA
CAGCTTCGACATCTACGACCGCATGGGCGGAATGGTTCCATTAGTCCATGACGCCCATGACCATCAGATGATGGACATGA
AGGAACAAATCTGGGGAGGGATCGGTTCTGTCGCCGATGCCTCCAGTGCTGACAACAGCCTTGCCGCATTAGCGGTTGAA
GTCACCGCAATGCAGTATGCCTTCCTGTTTCACTATCCCCAAGGCGACATCATTTCAGGCGAGTTGCACGTGCCTCTAGG
CCAACCTGTGACACTGCGCATGGAATCCAAGGATGTCATCCATGCCTTCTGGGTTCCCGAATTCCGCATCAAGCAAGACA
TCATTCCTGGTCAGCCCACTCTCTTGAACTTCACAGCAACCAAGCCAGGCCGGTATCCAATCATCTGCGCCGAACTCTGC
GGTCCATACCACGGGAACATGCATACGAAAGTGATTGTCGAAGCGCCCGGTGACTACGACACCTGGTTCAACAACAACGC
CAAAACAACGGTTTCAGAAGCATGA

Upstream 100 bases:

>100_bases
TGCAAAATAAGGATTTCTTGCAAAATTTGCGACGACTTAATAATCACTGCATGTTGCTTTGGAGCGATCTCCATAGCCTT
AAAAGATCCAAATAGATTCT

Downstream 100 bases:

>100_bases
CGGTTGCTATCTCTCCTCCTAGCAAAAAGCAATCAGATGGTCTTCAACCAACTGGCTGGTTGCGTTACTTCAGCTTCAGC
CTTGACCACAAGGTCATCGG

Product: cytochrome C oxidase subunit 2

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRTPFAILTLALVIALVLGGLWIGQHVNLLPVDASANAPVYDELFRVLFSIGAILFLGIVGLVVFSLIKFRRRPGQLEDG
LAIEGNLPLEIFWTAVPAVVVLFVGLYSFDIYDRMGGMVPLVHDAHDHQMMDMKEQIWGGIGSVADASSADNSLAALAVE
VTAMQYAFLFHYPQGDIISGELHVPLGQPVTLRMESKDVIHAFWVPEFRIKQDIIPGQPTLLNFTATKPGRYPIICAELC
GPYHGNMHTKVIVEAPGDYDTWFNNNAKTTVSEA

Sequences:

>Translated_274_residues
MRTPFAILTLALVIALVLGGLWIGQHVNLLPVDASANAPVYDELFRVLFSIGAILFLGIVGLVVFSLIKFRRRPGQLEDG
LAIEGNLPLEIFWTAVPAVVVLFVGLYSFDIYDRMGGMVPLVHDAHDHQMMDMKEQIWGGIGSVADASSADNSLAALAVE
VTAMQYAFLFHYPQGDIISGELHVPLGQPVTLRMESKDVIHAFWVPEFRIKQDIIPGQPTLLNFTATKPGRYPIICAELC
GPYHGNMHTKVIVEAPGDYDTWFNNNAKTTVSEA
>Mature_274_residues
MRTPFAILTLALVIALVLGGLWIGQHVNLLPVDASANAPVYDELFRVLFSIGAILFLGIVGLVVFSLIKFRRRPGQLEDG
LAIEGNLPLEIFWTAVPAVVVLFVGLYSFDIYDRMGGMVPLVHDAHDHQMMDMKEQIWGGIGSVADASSADNSLAALAVE
VTAMQYAFLFHYPQGDIISGELHVPLGQPVTLRMESKDVIHAFWVPEFRIKQDIIPGQPTLLNFTATKPGRYPIICAELC
GPYHGNMHTKVIVEAPGDYDTWFNNNAKTTVSEA

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 30102; Mature: 30102

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00078 COX2 ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPFAILTLALVIALVLGGLWIGQHVNLLPVDASANAPVYDELFRVLFSIGAILFLGIV
CCCHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
GLVVFSLIKFRRRPGQLEDGLAIEGNLPLEIFWTAVPAVVVLFVGLYSFDIYDRMGGMVP
HHHHHHHHHHHCCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
LVHDAHDHQMMDMKEQIWGGIGSVADASSADNSLAALAVEVTAMQYAFLFHYPQGDIISG
EEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCEECC
ELHVPLGQPVTLRMESKDVIHAFWVPEFRIKQDIIPGQPTLLNFTATKPGRYPIICAELC
EEEECCCCCEEEEECCCCEEEEEECCCHHHHHCCCCCCCCEEEEECCCCCCCCEEEHHHC
GPYHGNMHTKVIVEAPGDYDTWFNNNAKTTVSEA
CCCCCCCEEEEEEECCCCCCHHCCCCCCEEECCC
>Mature Secondary Structure
MRTPFAILTLALVIALVLGGLWIGQHVNLLPVDASANAPVYDELFRVLFSIGAILFLGIV
CCCHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
GLVVFSLIKFRRRPGQLEDGLAIEGNLPLEIFWTAVPAVVVLFVGLYSFDIYDRMGGMVP
HHHHHHHHHHHCCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
LVHDAHDHQMMDMKEQIWGGIGSVADASSADNSLAALAVEVTAMQYAFLFHYPQGDIISG
EEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCEECC
ELHVPLGQPVTLRMESKDVIHAFWVPEFRIKQDIIPGQPTLLNFTATKPGRYPIICAELC
EEEECCCCCEEEEECCCCEEEEEECCCHHHHHCCCCCCCCEEEEECCCCCCCCEEEHHHC
GPYHGNMHTKVIVEAPGDYDTWFNNNAKTTVSEA
CCCCCCCEEEEEEECCCCCCHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1659815; 8399373 [H]