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The map label for this gene is ydiU [C]

Identifier: 124022287

GI number: 124022287

Start: 553871

End: 555574

Strand: Reverse

Name: ydiU [C]

Synonym: P9303_05771

Alternate gene names: 124022287

Gene position: 555574-553871 (Counterclockwise)

Preceding gene: 124022292

Following gene: 124022279

Centisome position: 20.71

GC content: 43.43

Gene sequence:

>1704_bases
ATGTCGCATCCATCTGAATCATCTGCTGCTCCCTGCATAACGACAGTCGATGAGTTTGAGAAGCTGGCGGATTATTCTCT
GATGAATAGCTTAAATACTGACCCTGATTCCAGGGTAGATGGTGATGATCACCTTGCCCGACAAGTTTTTTCTGGTCATT
TCGTACCTGTAACACCCACGCCGCTTAAAAATCCAGAATATGTAACTCATAGCAGCACATTTTTTAATGAGCTTGGATTG
AACAACGAGCTGGCATTTAATGAAAAATTTTGCAAGTTATTTTCAGGTGATCTCTCTGCTACGCGTGAGCCTATGCGACA
GGTTGGCTGGGCAACTGGTTATGCATTATCAATTTATGGCAGAGAATACACCCAACAATGTCCATTTGGCACTGGCAATG
GATATGGCGATGGCCGAGCGATATCTGTATTTGAAGGAATCATTAATGGAAAACGCTGGGAAATGCAATTAAAAGGTGGT
GGTCCAACACCTTATTGCCGTGGTGCCGACGGACGCGCAGTACTACGTTCCAGTGTGCGTGAATTTCTAGCGCAAGAATA
TATGCAGGCTTTAGGTGTTCCAACATCGCGTTCGTTAACACTCTATGTTTCTAAATCTGAGACAATCACCCGCCCTTGGT
ATTCTCAACACTCTCAATCCATCGACCCTGATATTTTGGTGGAGAATCCTGTAGCAATTTCAACTCGCGTCGCACCATCC
TTTTTGCGAGTTGGTCAACTAGAATTATTTGCGCGTCGCGCTCGCAGCAATACTCATCCAAGAGCATTAGAAGAGTTGCG
CATGATTGTGTCGCATTTAATTGAACGAGAATACAAAAACGACATCAATCAAAGCCTTGCTTTTACAGTTCAATTGGTGG
AGTTGGCGCGGCTATTTCGCGAGCGCCTTACTTTATTGGTAGCCAATTGGCAACGCGTTGGTTACTGCCAAGGCAATTTC
AACAGTGACAATTGCGCCGCAGGTGGCTTCACCCTCGACTATGGACCATTTGGATTTTGTGAAATCTTTGATCCAGCATT
TCAGCCTTGGACTGGCGGCGGCGAACACTTTTCATACTTCAATCAACCAATCGCGGCGGAAGCAAATTATCATATGTTTT
GGAAAGCTTTAAGGCCGCTACTCGAAGAAGATGCTAAAGCCTTAAAAGAGTTTGACCAAGTGCGTGATGGCTTTGAACAA
GCCATGAATAAACAAATCCAAAAAATGTGGGCAGCCAAGCTTGGCTTGAAAGAATACAACTCCAATCTATTTGAGGAATT
ATTGCAGTTAATGCTCAATTCAAAAGTCGATTACACGATCTTCTTTCGCGAGCTATCTTATATACCAAACGATTTATTAG
CATTGAAAAAGAGCTTCTACATCCAAACCTCACAACAGATCGATGAGCAATGGCAATCTTGGCTGCAAAGCTGGCGCGAC
CTCGTGCTTAACAACGGCAATTCAACAGAGATATCAAAAATCATGAAACTGACTAATCCAAAATATACTTGGCGAGAGTG
GTTAATTGCCCCTGCCTATCAGCAGGCCGAAGAGGGCGACTATTCCTTAGTGAAAGAGTTGCAAGAAGCGCTAAGCCATC
CATATGATGAGCAATCAAAAGAAATAGAAGATAAATATTACCGTCTAAAACCTAAGGCATTCTTTAATGCTGGTGGCATA
TCGCACTATAGCTGTTCATCTTGA

Upstream 100 bases:

>100_bases
CACTAGAGAAGTTCCTTTGGCGCAACGTTTTTGCTTATACGCTGGTGTTCAAAACACATAGAGGACCGTTGGCGGACCTC
CTAAGTCACTTTTAAAAAGA

Downstream 100 bases:

>100_bases
GGCGAAATAAAAACTGAACCATTGGAATCATAAATTTCATGCGAGAAAAAGATTTAGTCATTGACTCACAAAAAAGCAGT
GACTTCATTATCAGTAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 566

Protein sequence:

>567_residues
MSHPSESSAAPCITTVDEFEKLADYSLMNSLNTDPDSRVDGDDHLARQVFSGHFVPVTPTPLKNPEYVTHSSTFFNELGL
NNELAFNEKFCKLFSGDLSATREPMRQVGWATGYALSIYGREYTQQCPFGTGNGYGDGRAISVFEGIINGKRWEMQLKGG
GPTPYCRGADGRAVLRSSVREFLAQEYMQALGVPTSRSLTLYVSKSETITRPWYSQHSQSIDPDILVENPVAISTRVAPS
FLRVGQLELFARRARSNTHPRALEELRMIVSHLIEREYKNDINQSLAFTVQLVELARLFRERLTLLVANWQRVGYCQGNF
NSDNCAAGGFTLDYGPFGFCEIFDPAFQPWTGGGEHFSYFNQPIAAEANYHMFWKALRPLLEEDAKALKEFDQVRDGFEQ
AMNKQIQKMWAAKLGLKEYNSNLFEELLQLMLNSKVDYTIFFRELSYIPNDLLALKKSFYIQTSQQIDEQWQSWLQSWRD
LVLNNGNSTEISKIMKLTNPKYTWREWLIAPAYQQAEEGDYSLVKELQEALSHPYDEQSKEIEDKYYRLKPKAFFNAGGI
SHYSCSS

Sequences:

>Translated_567_residues
MSHPSESSAAPCITTVDEFEKLADYSLMNSLNTDPDSRVDGDDHLARQVFSGHFVPVTPTPLKNPEYVTHSSTFFNELGL
NNELAFNEKFCKLFSGDLSATREPMRQVGWATGYALSIYGREYTQQCPFGTGNGYGDGRAISVFEGIINGKRWEMQLKGG
GPTPYCRGADGRAVLRSSVREFLAQEYMQALGVPTSRSLTLYVSKSETITRPWYSQHSQSIDPDILVENPVAISTRVAPS
FLRVGQLELFARRARSNTHPRALEELRMIVSHLIEREYKNDINQSLAFTVQLVELARLFRERLTLLVANWQRVGYCQGNF
NSDNCAAGGFTLDYGPFGFCEIFDPAFQPWTGGGEHFSYFNQPIAAEANYHMFWKALRPLLEEDAKALKEFDQVRDGFEQ
AMNKQIQKMWAAKLGLKEYNSNLFEELLQLMLNSKVDYTIFFRELSYIPNDLLALKKSFYIQTSQQIDEQWQSWLQSWRD
LVLNNGNSTEISKIMKLTNPKYTWREWLIAPAYQQAEEGDYSLVKELQEALSHPYDEQSKEIEDKYYRLKPKAFFNAGGI
SHYSCSS
>Mature_566_residues
SHPSESSAAPCITTVDEFEKLADYSLMNSLNTDPDSRVDGDDHLARQVFSGHFVPVTPTPLKNPEYVTHSSTFFNELGLN
NELAFNEKFCKLFSGDLSATREPMRQVGWATGYALSIYGREYTQQCPFGTGNGYGDGRAISVFEGIINGKRWEMQLKGGG
PTPYCRGADGRAVLRSSVREFLAQEYMQALGVPTSRSLTLYVSKSETITRPWYSQHSQSIDPDILVENPVAISTRVAPSF
LRVGQLELFARRARSNTHPRALEELRMIVSHLIEREYKNDINQSLAFTVQLVELARLFRERLTLLVANWQRVGYCQGNFN
SDNCAAGGFTLDYGPFGFCEIFDPAFQPWTGGGEHFSYFNQPIAAEANYHMFWKALRPLLEEDAKALKEFDQVRDGFEQA
MNKQIQKMWAAKLGLKEYNSNLFEELLQLMLNSKVDYTIFFRELSYIPNDLLALKKSFYIQTSQQIDEQWQSWLQSWRDL
VLNNGNSTEISKIMKLTNPKYTWREWLIAPAYQQAEEGDYSLVKELQEALSHPYDEQSKEIEDKYYRLKPKAFFNAGGIS
HYSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=427, Percent_Identity=32.5526932084309, Blast_Score=153, Evalue=5e-37,
Organism=Escherichia coli, GI1787999, Length=528, Percent_Identity=31.0606060606061, Blast_Score=191, Evalue=8e-50,
Organism=Saccharomyces cerevisiae, GI6325034, Length=335, Percent_Identity=29.2537313432836, Blast_Score=134, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 64767; Mature: 64636

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPSESSAAPCITTVDEFEKLADYSLMNSLNTDPDSRVDGDDHLARQVFSGHFVPVTPT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEECCCC
PLKNPEYVTHSSTFFNELGLNNELAFNEKFCKLFSGDLSATREPMRQVGWATGYALSIYG
CCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECC
REYTQQCPFGTGNGYGDGRAISVFEGIINGKRWEMQLKGGGPTPYCRGADGRAVLRSSVR
CHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
EFLAQEYMQALGVPTSRSLTLYVSKSETITRPWYSQHSQSIDPDILVENPVAISTRVAPS
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCEEECCCCEEEHHHCHH
FLRVGQLELFARRARSNTHPRALEELRMIVSHLIEREYKNDINQSLAFTVQLVELARLFR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLTLLVANWQRVGYCQGNFNSDNCAAGGFTLDYGPFGFCEIFDPAFQPWTGGGEHFSYF
HHHHHHHHCHHHEEEECCCCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCHHHHH
NQPIAAEANYHMFWKALRPLLEEDAKALKEFDQVRDGFEQAMNKQIQKMWAAKLGLKEYN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNLFEELLQLMLNSKVDYTIFFRELSYIPNDLLALKKSFYIQTSQQIDEQWQSWLQSWRD
HHHHHHHHHHHHCCCCCEEEHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LVLNNGNSTEISKIMKLTNPKYTWREWLIAPAYQQAEEGDYSLVKELQEALSHPYDEQSK
HHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHH
EIEDKYYRLKPKAFFNAGGISHYSCSS
HHHHHHHEECCHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SHPSESSAAPCITTVDEFEKLADYSLMNSLNTDPDSRVDGDDHLARQVFSGHFVPVTPT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEECCCC
PLKNPEYVTHSSTFFNELGLNNELAFNEKFCKLFSGDLSATREPMRQVGWATGYALSIYG
CCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECC
REYTQQCPFGTGNGYGDGRAISVFEGIINGKRWEMQLKGGGPTPYCRGADGRAVLRSSVR
CHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
EFLAQEYMQALGVPTSRSLTLYVSKSETITRPWYSQHSQSIDPDILVENPVAISTRVAPS
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCEEECCCCEEEHHHCHH
FLRVGQLELFARRARSNTHPRALEELRMIVSHLIEREYKNDINQSLAFTVQLVELARLFR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLTLLVANWQRVGYCQGNFNSDNCAAGGFTLDYGPFGFCEIFDPAFQPWTGGGEHFSYF
HHHHHHHHCHHHEEEECCCCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCHHHHH
NQPIAAEANYHMFWKALRPLLEEDAKALKEFDQVRDGFEQAMNKQIQKMWAAKLGLKEYN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNLFEELLQLMLNSKVDYTIFFRELSYIPNDLLALKKSFYIQTSQQIDEQWQSWLQSWRD
HHHHHHHHHHHHCCCCCEEEHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LVLNNGNSTEISKIMKLTNPKYTWREWLIAPAYQQAEEGDYSLVKELQEALSHPYDEQSK
HHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHH
EIEDKYYRLKPKAFFNAGGISHYSCSS
HHHHHHHEECCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA