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The map label for this gene is yrbE [C]

Identifier: 124022277

GI number: 124022277

Start: 545841

End: 546587

Strand: Reverse

Name: yrbE [C]

Synonym: P9303_05671

Alternate gene names: 124022277

Gene position: 546587-545841 (Counterclockwise)

Preceding gene: 124022278

Following gene: 124022275

Centisome position: 20.37

GC content: 57.56

Gene sequence:

>747_bases
ATGACGACTCCTCGCTGGCTGAAGCGACTGGGCAGCAGCCTCATCATCGGAGGCCAGGCAGTGGCCGCCACCGCCAGAGG
TCGTATCAACAAGGTCGACCTGTTCGATCAGCTGATGGAGGCCGGTCCAGGCAGCTTCCTGATTGTGCTGATCACAGGCT
TAGCCGCAGGAACGGTCTTCAACATCCAGGTCGCCGCAGAACTGAGCAGACAAGGGGCTGGTTCCACGGTGGGAGGGATT
CTCGCCATTGGTATGGCAAGGGAAATCGCCCCTCTCCTCACCGCCACGCTGCTGACCGGCAAGGTAGCCACGGCCTATGC
AGCTCAGCTGGGCACCATGAAGGTCACCGAACAGATCGATGCCATCACCATGCTGCGAACCGAGCCTGTTGAGTACTTGG
TGGTTCCAAGAGTGATCGCCATGGTGGTCATGGCACCGGTGCAATGCATGCTGTTCTTCGGCATAGCCCTCTGGAGCGGC
CAGGTCAGCAGCACCAATCTTTATCAAATTCCACCAGAGGTCTTCTGGAATTCCGTGCGCACCTGGCTGACTCCGGATGA
CATGCCATTCATGCTGGTCAAATCATTGGTGTTCGGCCTCCAGATTGCTGTTCTCTCCTGCGGATGGGGTCTCACAACGC
GTGGTGGTCCAAAAGAAGTTGGCACCAGCACCACTGGCGCCGTTGTGATGACTCTGGTCACAGTGTCTCTGATGGATGTG
TTGCTCACCCAGATTCTTTTCAGCTGA

Upstream 100 bases:

>100_bases
GCATGTGCATGGGATTCATTCCCGCCGTGCTTGTGGCGCTGGGTCTTGTGGTGATGCGAGGCTGGCCCGAAAGGAACTCT
CACAACCAGGCAGCCACGTC

Downstream 100 bases:

>100_bases
TGTCATCAAGGCCCACAAACAAACGCGCAGCTATTGACAAATCCTGCTCGCCCCCATATCGCTCCTAAATCGGTGATGGG
TCCAGATCGGCCCTCTCTCA

Product: transporter membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MTTPRWLKRLGSSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELSRQGAGSTVGGI
LAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEPVEYLVVPRVIAMVVMAPVQCMLFFGIALWSG
QVSSTNLYQIPPEVFWNSVRTWLTPDDMPFMLVKSLVFGLQIAVLSCGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDV
LLTQILFS

Sequences:

>Translated_248_residues
MTTPRWLKRLGSSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELSRQGAGSTVGGI
LAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEPVEYLVVPRVIAMVVMAPVQCMLFFGIALWSG
QVSSTNLYQIPPEVFWNSVRTWLTPDDMPFMLVKSLVFGLQIAVLSCGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDV
LLTQILFS
>Mature_247_residues
TTPRWLKRLGSSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELSRQGAGSTVGGIL
AIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEPVEYLVVPRVIAMVVMAPVQCMLFFGIALWSGQ
VSSTNLYQIPPEVFWNSVRTWLTPDDMPFMLVKSLVFGLQIAVLSCGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDVL
LTQILFS

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=217, Percent_Identity=27.1889400921659, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26350; Mature: 26218

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCC
>Mature Secondary Structure 
TTPRWLKRLGSSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVF
CCHHHHHHCCCCEEECCHHHHHHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCEE
NIQVAAELSRQGAGSTVGGILAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQID
EEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AITMLRTEPVEYLVVPRVIAMVVMAPVQCMLFFGIALWSGQVSSTNLYQIPPEVFWNSVR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHH
TWLTPDDMPFMLVKSLVFGLQIAVLSCGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDV
HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHH
LLTQILFS
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]