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The map label for this gene is yebC [C]

Identifier: 124022248

GI number: 124022248

Start: 521119

End: 521865

Strand: Reverse

Name: yebC [C]

Synonym: P9303_05381

Alternate gene names: 124022248

Gene position: 521865-521119 (Counterclockwise)

Preceding gene: 124022249

Following gene: 124022243

Centisome position: 19.45

GC content: 55.69

Gene sequence:

>747_bases
ATGGCCGGCCATAGCAAATGGTCTCAAATCAAACGCAGCAAAGCGGTGGTGGATGCCAAGCGAGGTGCTGTGTTCACCCG
CCTGGCACGCGAGATCAGTGTGGCAGCAAGAAGCGGCGGAGACCCCAACGGTAATTTTCAACTGCGCACCGCAATCAACA
AAGCCAAAGCCGCAAGAATGCCTGCGGCCAATATTGAGCGCGCGATTGCAAAAGGCTCCGGCCACGACCAACACGGCGCA
TGCCAACTGGAAGCCATCCGTTATGAAGGCTATGGCCCTGGAGGCGTTGCGGTGCTGATCGAAGCGCTCACCGACAACCG
CAATCGCACGGCCGCAGACCTACGCCTAACCTTCAATAAACACGGCGGCAAGCTTGGCGAAAGCGGCTGCGTGGCCTACT
TGTTTGAGCAACGCAGCGAAGTGTATTTGAGTGCGCAGTCTGCACAAGATGGGGGCAAGGTTTCAGAAGATGCACTGCTG
GAAAACCTGCTGGAGCTTGAAGCTGATGGCTATCAATTGATCGACGATGGCGGCGCTGTGGTGTATGGCCCGTTTCAAGC
TCTAGAAGGCCTGCAGGCTGGGCTCAGAGATCAAGGCTGGATTATTGAGGGATGGGAACACTGCTGGAGACCACTCACCA
CGATCAGCCAAGCAGATCAAAAAAGCGAAGACCAATGCCTGCAATTGCTGGATGCACTTGATGAGCTCGACGATGTGCAT
CACATCAGCTCAAACCTGGAGAGCTAG

Upstream 100 bases:

>100_bases
CAAAAGTTGTGTTCAACGCACGGGGATGATCGCAACACTGTCGTTCAACGCGAACGCCCCTAGCGTTGATGGTCAAGCAA
CAAGCTAATCAGCCTCTGCC

Downstream 100 bases:

>100_bases
CAAGGCACAATGGCGAGATGACTGAGGCAGCCGTAACGCCACGACGGCTATGACGGCAAGTGAAGGGGATGAGACGGCCA
AAAAAAACCGCTGTGGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MAGHSKWSQIKRSKAVVDAKRGAVFTRLAREISVAARSGGDPNGNFQLRTAINKAKAARMPAANIERAIAKGSGHDQHGA
CQLEAIRYEGYGPGGVAVLIEALTDNRNRTAADLRLTFNKHGGKLGESGCVAYLFEQRSEVYLSAQSAQDGGKVSEDALL
ENLLELEADGYQLIDDGGAVVYGPFQALEGLQAGLRDQGWIIEGWEHCWRPLTTISQADQKSEDQCLQLLDALDELDDVH
HISSNLES

Sequences:

>Translated_248_residues
MAGHSKWSQIKRSKAVVDAKRGAVFTRLAREISVAARSGGDPNGNFQLRTAINKAKAARMPAANIERAIAKGSGHDQHGA
CQLEAIRYEGYGPGGVAVLIEALTDNRNRTAADLRLTFNKHGGKLGESGCVAYLFEQRSEVYLSAQSAQDGGKVSEDALL
ENLLELEADGYQLIDDGGAVVYGPFQALEGLQAGLRDQGWIIEGWEHCWRPLTTISQADQKSEDQCLQLLDALDELDDVH
HISSNLES
>Mature_247_residues
AGHSKWSQIKRSKAVVDAKRGAVFTRLAREISVAARSGGDPNGNFQLRTAINKAKAARMPAANIERAIAKGSGHDQHGAC
QLEAIRYEGYGPGGVAVLIEALTDNRNRTAADLRLTFNKHGGKLGESGCVAYLFEQRSEVYLSAQSAQDGGKVSEDALLE
NLLELEADGYQLIDDGGAVVYGPFQALEGLQAGLRDQGWIIEGWEHCWRPLTTISQADQKSEDQCLQLLDALDELDDVHH
ISSNLES

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=256, Percent_Identity=26.953125, Blast_Score=87, Evalue=1e-17,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=39.5161290322581, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1788294, Length=247, Percent_Identity=31.5789473684211, Blast_Score=112, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17556100, Length=250, Percent_Identity=26.8, Blast_Score=68, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6321458, Length=268, Percent_Identity=30.9701492537313, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24583305, Length=247, Percent_Identity=29.1497975708502, Blast_Score=95, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y538_PROM3 (A2C730)

Other databases:

- EMBL:   CP000554
- RefSeq:   YP_001016555.1
- ProteinModelPortal:   A2C730
- SMR:   A2C730
- STRING:   A2C730
- GeneID:   4776990
- GenomeReviews:   CP000554_GR
- KEGG:   pmf:P9303_05381
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   GCVAYLF
- ProtClustDB:   PRK00110
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26858; Mature: 26727

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWSQIKRSKAVVDAKRGAVFTRLAREISVAARSGGDPNGNFQLRTAINKAKAARM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHCC
PAANIERAIAKGSGHDQHGACQLEAIRYEGYGPGGVAVLIEALTDNRNRTAADLRLTFNK
CHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEC
HGGKLGESGCVAYLFEQRSEVYLSAQSAQDGGKVSEDALLENLLELEADGYQLIDDGGAV
CCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEE
VYGPFQALEGLQAGLRDQGWIIEGWEHCWRPLTTISQADQKSEDQCLQLLDALDELDDVH
EECHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
HISSNLES
HHHHHCCC
>Mature Secondary Structure 
AGHSKWSQIKRSKAVVDAKRGAVFTRLAREISVAARSGGDPNGNFQLRTAINKAKAARM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHCC
PAANIERAIAKGSGHDQHGACQLEAIRYEGYGPGGVAVLIEALTDNRNRTAADLRLTFNK
CHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEC
HGGKLGESGCVAYLFEQRSEVYLSAQSAQDGGKVSEDALLENLLELEADGYQLIDDGGAV
CCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEE
VYGPFQALEGLQAGLRDQGWIIEGWEHCWRPLTTISQADQKSEDQCLQLLDALDELDDVH
EECHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
HISSNLES
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA