| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022230
Identifier: 124022230
GI number: 124022230
Start: 508204
End: 508725
Strand: Direct
Name: 124022230
Synonym: P9303_05201
Alternate gene names: NA
Gene position: 508204-508725 (Clockwise)
Preceding gene: 124022229
Following gene: 124022234
Centisome position: 18.94
GC content: 47.7
Gene sequence:
>522_bases TTGTCTAGCCGCGAAGCCAAGCATGACAGCAGATTGAAAAGTTTTCCCGCTTCGCAGGAGCTTTTAAAGCTTGAAGCCTT GGCGAGAAAGCAAGGCAGTGGAATTGAGATTAATTCACTCAATGGACTTTGGAAGTTTGTATCTGTTTGGAAGCAAGGCA AAGAGAAAGAAGACTTCTTCTCTTCTTTGATGCTTCGATTTTTTTCTGCGAGCCTAGAGCTCAGGCAAGAGAATGGGAGT CATGAATGCATGCCTTTGGTGATTGCTAACTCTGTTGGCATTGGCTTGCTAAAGCTTGAATTCACGGGTCGAGGAGAGCT CAAGGGATCGCAGCCTCTACTGCCTTTCTTTTTTGATCGAATCACAGTTAGTTTTGCTTCAAGGGTTTTATGGAGCCGTC CGATTGATATGCCCGAAGAGAAAGAAAGGCCTTTCTTTGCTCTGATCTCAATGGCCCCGAATGAAGAGTGGCTTGCGGCT AGAGGCCGTGGGGGCGGCCTTGCGCTTTGGCTCAAGGGCTAG
Upstream 100 bases:
>100_bases TGTTATCAAATAGACACTTATATTCTTCAATAGATTTTGATTTGACTATTCCTCTAGTCGTTGGTGTGATTAAATTGATC GTCATGAGGGTGATTGTTCT
Downstream 100 bases:
>100_bases ATCAACCAAGTAGCCCATTAAGGTTTAATGTTGCACTAGCCATTAGTAAGCAATAAGTAAGTAGGATTGCCGTTACAAAT AGAGCGCCAGTCGCATCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSSREAKHDSRLKSFPASQELLKLEALARKQGSGIEINSLNGLWKFVSVWKQGKEKEDFFSSLMLRFFSASLELRQENGS HECMPLVIANSVGIGLLKLEFTGRGELKGSQPLLPFFFDRITVSFASRVLWSRPIDMPEEKERPFFALISMAPNEEWLAA RGRGGGLALWLKG
Sequences:
>Translated_173_residues MSSREAKHDSRLKSFPASQELLKLEALARKQGSGIEINSLNGLWKFVSVWKQGKEKEDFFSSLMLRFFSASLELRQENGS HECMPLVIANSVGIGLLKLEFTGRGELKGSQPLLPFFFDRITVSFASRVLWSRPIDMPEEKERPFFALISMAPNEEWLAA RGRGGGLALWLKG >Mature_172_residues SSREAKHDSRLKSFPASQELLKLEALARKQGSGIEINSLNGLWKFVSVWKQGKEKEDFFSSLMLRFFSASLELRQENGSH ECMPLVIANSVGIGLLKLEFTGRGELKGSQPLLPFFFDRITVSFASRVLWSRPIDMPEEKERPFFALISMAPNEEWLAAR GRGGGLALWLKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19491; Mature: 19360
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSREAKHDSRLKSFPASQELLKLEALARKQGSGIEINSLNGLWKFVSVWKQGKEKEDFF CCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCHHHHH SSLMLRFFSASLELRQENGSHECMPLVIANSVGIGLLKLEFTGRGELKGSQPLLPFFFDR HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHH ITVSFASRVLWSRPIDMPEEKERPFFALISMAPNEEWLAARGRGGGLALWLKG HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHEEECCCCCCEEEEECC >Mature Secondary Structure SSREAKHDSRLKSFPASQELLKLEALARKQGSGIEINSLNGLWKFVSVWKQGKEKEDFF CCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCHHHHH SSLMLRFFSASLELRQENGSHECMPLVIANSVGIGLLKLEFTGRGELKGSQPLLPFFFDR HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHH ITVSFASRVLWSRPIDMPEEKERPFFALISMAPNEEWLAARGRGGGLALWLKG HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHEEECCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA