| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022052
Identifier: 124022052
GI number: 124022052
Start: 350160
End: 351416
Strand: Direct
Name: 124022052
Synonym: P9303_03421
Alternate gene names: NA
Gene position: 350160-351416 (Clockwise)
Preceding gene: 124022050
Following gene: 124022053
Centisome position: 13.05
GC content: 57.28
Gene sequence:
>1257_bases ATGATGCGCAGCATGTTGAAAGCCCTCTCGCTCACCGTTGCTGTGGGAACAGCCCTGCTCATGAGTGGAGGCCCCAGCCA CAGCCAAACATCACCTGAGCTCACCAAAAAGGTGCTGCAGATGGAGCGCGATCGAGAACAAGAATTTGAAAACTACTTCG GTGAAGACCTGGCATCCGTCAGCAAAACGGCTGATGAAACTGCCGCCGAACTCGAACGGCTGAGTGCAGAAACCGGAACA CGCTCAGCGCTGCTGTATGTGATTCCGCGGAAAAGCCACCTGCACCTGGTGCTGATTCCGCCCAGTGGCACTCCGATCGT CAAAGACTTCTATGAAGTCACCGACCCCGAGCTGTTCGCGGTCTCGCGCCGCTTTCACAAGGGCATCCTGCGGATGGATA CAACCCAAAGTCAAAGCGCAGGCCAGCAGTTGTACGACTGGATCATCAAGCCGTATGAGCAGGAGCTGGCGGATGCAGAG ATTGACCTACTTCTGTTCTGCCTGGGTGATGGCGTGAAGGATCTGGCTTTGCCAGCCCTGTTCAACAACGGCTCCTACCT GATCGAGAGCTATGCGATGGCGCGGATCCCCGCGTTCAACCTGATCGAGACGACCTACAAACCCTTTAAAAGCGGTCAGC TGTTGGCCATGGGAGCCAGCCAGTTTCAAGATCCATCGATTCCAACCTTGCCAGGCACAGCACAAGAAATCGCAGCCCTC AGCCAAAGCCTTGGGTCTGCAGGGCAAAGCACATGGGGGGTAACACGGTTGGAGAACAGGGCCTTCACGCAGAAGCGGAT CAACCAGAACCTCTCCAAGAAGCCTTACACCACGCTGCACGTGAGCACCCATGCCCAGTTTCAGCCTGGCCAGGTGGAGG AGTCCTACATCCAACTCTGGGATCAGAAGCTGAAGCTGAACGCTCTCAATGCAATCGACTGGGACCAGTCCAAGGCAGAT CTGATCGTGCTCAGCGCCTGTCAGACCGCTCTGGGAGACACCGATGCCGCCAATGGATTTGCCGGACTCGCGCTCAAAGC CGGGGTGCCCTCAGCCATCGGCACCCTTTGGTCGGTCAACGATCAATCGACCACGGAGTTGATGACATCGTTCTACGGCG CACTGCCGGACAGCCGCACCAAAGCTCAGGCCCTGCAAACGGCACAGATCACTGCGATCCGACAACCATCGTCGTCAACG TCGAGCGCTGCTCCCTACTACTGGGCTGGCTTCAGCCTGATCAGCACACCTTGGTGA
Upstream 100 bases:
>100_bases GTGCTGAATCCCTTACGAGGAAATCGTCCCGTAACCAAAACCTTACAAAAGTGGGCCATCCCAGCAATCGGAGCTAACTG GGTAGCAAGACCAACCCCTG
Downstream 100 bases:
>100_bases TCAGACTGAAGCCGAGTTAAAGCTCAGCTTTCGACGCGCCACTCCTGGTCGGATGGAGACCAGTCGTTCAGCTCGGATGC TTTAAACCAGAGGCCGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; Haemagglutination Activity Domain Protein; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Hemagglutinin Family Outer Membrane Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Domain-Containing Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Region; Tetratricopeptide Domain Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Peptidase Domain-Containing Protein; Hemagglutination Activity Domain-Containing Protein
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MMRSMLKALSLTVAVGTALLMSGGPSHSQTSPELTKKVLQMERDREQEFENYFGEDLASVSKTADETAAELERLSAETGT RSALLYVIPRKSHLHLVLIPPSGTPIVKDFYEVTDPELFAVSRRFHKGILRMDTTQSQSAGQQLYDWIIKPYEQELADAE IDLLLFCLGDGVKDLALPALFNNGSYLIESYAMARIPAFNLIETTYKPFKSGQLLAMGASQFQDPSIPTLPGTAQEIAAL SQSLGSAGQSTWGVTRLENRAFTQKRINQNLSKKPYTTLHVSTHAQFQPGQVEESYIQLWDQKLKLNALNAIDWDQSKAD LIVLSACQTALGDTDAANGFAGLALKAGVPSAIGTLWSVNDQSTTELMTSFYGALPDSRTKAQALQTAQITAIRQPSSST SSAAPYYWAGFSLISTPW
Sequences:
>Translated_418_residues MMRSMLKALSLTVAVGTALLMSGGPSHSQTSPELTKKVLQMERDREQEFENYFGEDLASVSKTADETAAELERLSAETGT RSALLYVIPRKSHLHLVLIPPSGTPIVKDFYEVTDPELFAVSRRFHKGILRMDTTQSQSAGQQLYDWIIKPYEQELADAE IDLLLFCLGDGVKDLALPALFNNGSYLIESYAMARIPAFNLIETTYKPFKSGQLLAMGASQFQDPSIPTLPGTAQEIAAL SQSLGSAGQSTWGVTRLENRAFTQKRINQNLSKKPYTTLHVSTHAQFQPGQVEESYIQLWDQKLKLNALNAIDWDQSKAD LIVLSACQTALGDTDAANGFAGLALKAGVPSAIGTLWSVNDQSTTELMTSFYGALPDSRTKAQALQTAQITAIRQPSSST SSAAPYYWAGFSLISTPW >Mature_418_residues MMRSMLKALSLTVAVGTALLMSGGPSHSQTSPELTKKVLQMERDREQEFENYFGEDLASVSKTADETAAELERLSAETGT RSALLYVIPRKSHLHLVLIPPSGTPIVKDFYEVTDPELFAVSRRFHKGILRMDTTQSQSAGQQLYDWIIKPYEQELADAE IDLLLFCLGDGVKDLALPALFNNGSYLIESYAMARIPAFNLIETTYKPFKSGQLLAMGASQFQDPSIPTLPGTAQEIAAL SQSLGSAGQSTWGVTRLENRAFTQKRINQNLSKKPYTTLHVSTHAQFQPGQVEESYIQLWDQKLKLNALNAIDWDQSKAD LIVLSACQTALGDTDAANGFAGLALKAGVPSAIGTLWSVNDQSTTELMTSFYGALPDSRTKAQALQTAQITAIRQPSSST SSAAPYYWAGFSLISTPW
Specific function: Unknown
COG id: COG4995
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45702; Mature: 45702
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRSMLKALSLTVAVGTALLMSGGPSHSQTSPELTKKVLQMERDREQEFENYFGEDLASV CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKTADETAAELERLSAETGTRSALLYVIPRKSHLHLVLIPPSGTPIVKDFYEVTDPELFA HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCHHHH VSRRFHKGILRMDTTQSQSAGQQLYDWIIKPYEQELADAEIDLLLFCLGDGVKDLALPAL HHHHHHHCHHHCCCCCCHHHHHHHHHHHHCHHHHHHCCCHHHEEEEECCCCHHHHHHHHH FNNGSYLIESYAMARIPAFNLIETTYKPFKSGQLLAMGASQFQDPSIPTLPGTAQEIAAL CCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCHHCCCCCCCCCCCCHHHHHHH SQSLGSAGQSTWGVTRLENRAFTQKRINQNLSKKPYTTLHVSTHAQFQPGQVEESYIQLW HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH DQKLKLNALNAIDWDQSKADLIVLSACQTALGDTDAANGFAGLALKAGVPSAIGTLWSVN HHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCEEEECCCCHHHHHEECCC DQSTTELMTSFYGALPDSRTKAQALQTAQITAIRQPSSSTSSAAPYYWAGFSLISTPW CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEEEECCHHHCCCC >Mature Secondary Structure MMRSMLKALSLTVAVGTALLMSGGPSHSQTSPELTKKVLQMERDREQEFENYFGEDLASV CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKTADETAAELERLSAETGTRSALLYVIPRKSHLHLVLIPPSGTPIVKDFYEVTDPELFA HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCHHHH VSRRFHKGILRMDTTQSQSAGQQLYDWIIKPYEQELADAEIDLLLFCLGDGVKDLALPAL HHHHHHHCHHHCCCCCCHHHHHHHHHHHHCHHHHHHCCCHHHEEEEECCCCHHHHHHHHH FNNGSYLIESYAMARIPAFNLIETTYKPFKSGQLLAMGASQFQDPSIPTLPGTAQEIAAL CCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCHHCCCCCCCCCCCCHHHHHHH SQSLGSAGQSTWGVTRLENRAFTQKRINQNLSKKPYTTLHVSTHAQFQPGQVEESYIQLW HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH DQKLKLNALNAIDWDQSKADLIVLSACQTALGDTDAANGFAGLALKAGVPSAIGTLWSVN HHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCEEEECCCCHHHHHEECCC DQSTTELMTSFYGALPDSRTKAQALQTAQITAIRQPSSSTSSAAPYYWAGFSLISTPW CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEEEECCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA