Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124022027

Identifier: 124022027

GI number: 124022027

Start: 329443

End: 329784

Strand: Direct

Name: 124022027

Synonym: P9303_03161

Alternate gene names: NA

Gene position: 329443-329784 (Clockwise)

Preceding gene: 124022026

Following gene: 124022032

Centisome position: 12.28

GC content: 54.39

Gene sequence:

>342_bases
ATGGCGTTTGATCCCGACCGCCACCTATCTATTGTCTCAAGATCCTGGCCTGGTTTGATGACCTCAACAAAGCAAAACCT
TCCAGGCGATCAGGACCTTCCAGGCGATCAGGACCTTCCAAGCGAACAGGCTGTCTTCGAGGGATCGGAACAGGGTTCTG
AAAGTTCAGAGGTACAGCCACCAGTCAATAGTGCGACTACGGGAGATCCCCCTGCTTTTGGTTGGAGTGCCTATGCAGAA
CGGGTCAACGGACGTTTCGCGATGATTGGATTGGCCGCTGTGCTGCTCATCGAAGTGGTGAGTCGCGACACCTTCTTGCA
TTGGGCCGGTTTGCTGTCCTGA

Upstream 100 bases:

>100_bases
AGCTTCTCGAGGATCGTGATTTGGCTGTCATCAGCGTCGGTCATCGCTCGACCCTTATCGACTTCCACGATTCCGTGCTT
GAACTTTTAGGGAATGGCAA

Downstream 100 bases:

>100_bases
GTGGTTGTGTTGTCTAATCAGCTTGGCAAACGGATCAGGTCCACATCCCAACGACCATCTCGGCTGACTTGAACTGCTAG
AAGTCGACCCTCGCCATCCA

Product: high light inducible protein

Products: NA

Alternate protein names: High Light Inducible

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAFDPDRHLSIVSRSWPGLMTSTKQNLPGDQDLPGDQDLPSEQAVFEGSEQGSESSEVQPPVNSATTGDPPAFGWSAYAE
RVNGRFAMIGLAAVLLIEVVSRDTFLHWAGLLS

Sequences:

>Translated_113_residues
MAFDPDRHLSIVSRSWPGLMTSTKQNLPGDQDLPGDQDLPSEQAVFEGSEQGSESSEVQPPVNSATTGDPPAFGWSAYAE
RVNGRFAMIGLAAVLLIEVVSRDTFLHWAGLLS
>Mature_112_residues
AFDPDRHLSIVSRSWPGLMTSTKQNLPGDQDLPGDQDLPSEQAVFEGSEQGSESSEVQPPVNSATTGDPPAFGWSAYAER
VNGRFAMIGLAAVLLIEVVSRDTFLHWAGLLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12159; Mature: 12027

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDPDRHLSIVSRSWPGLMTSTKQNLPGDQDLPGDQDLPSEQAVFEGSEQGSESSEVQP
CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
PVNSATTGDPPAFGWSAYAERVNGRFAMIGLAAVLLIEVVSRDTFLHWAGLLS
CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
AFDPDRHLSIVSRSWPGLMTSTKQNLPGDQDLPGDQDLPSEQAVFEGSEQGSESSEVQP
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
PVNSATTGDPPAFGWSAYAERVNGRFAMIGLAAVLLIEVVSRDTFLHWAGLLS
CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA