| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022030
Identifier: 124022030
GI number: 124022030
Start: 330850
End: 331830
Strand: Reverse
Name: 124022030
Synonym: P9303_03191
Alternate gene names: NA
Gene position: 331830-330850 (Counterclockwise)
Preceding gene: 124022031
Following gene: 124022029
Centisome position: 12.37
GC content: 56.47
Gene sequence:
>981_bases GTGGTCAATGCCAGTCTTAACTGGGGCAGCATTGTTGGAATCGTGCTTGCAGTAGGCGGTGCTCTGCTGTATTTCATGCG ATCGTTCAAGCCTGCCTTAGCTCGCGACTACGACGTCTTTTTCGCAGCCATCGGCCTGCTTTGTGGAGGAGTGTTCTTTT TTCAGGGGTGGCGCCTGGATCCGATCCTGCAATTCGGCGTGTTCCTGCTAGCAGGGACCACAATGTTTTTCGCCTACGAA AGTGTCAGGTTGAGAGGCGTAGCTGTCGAGGGGGCTCGGCGTTCCTCCTATTTCGATGATGAACCTGCCCCGCCTATCAA CCAGGGTCGAGATGGAGGCCTAAGGGGTGGCTGGGATGAACCCTACGACCGCTTTGAAGAACCCCAACCGGTTCGAAGAC GCTTCTCCAGTCGAGACAACAACGATGCTGATCGCCCTCAAGAAGACTTATACCGGCCCCGCAGAACCACAAGAGCTGCA ATACCAGAACAAGCAGCAAGCCGTCGCCGCAACAAGGAGGAAGAGTCCTGGGGTGAAGACTCAGAACGCTCTCGACGCAT GGCCCGATTCGGCCGCCAGGATGATGAACAGAACAATCGTTCTGACTTTGGAGAACGCCGCAATGTTCGCCAAGATCAAC GCCGGGGCAGCCGTCCCTCAGCCAATCAACAAACCACCAATCGAACCCAATTAAGCAACGAGCCAAGGCCTACGAGTAGA GGGGGCTACGCCTCATCAAGAAAACCTGGTGTACCTCAGGGGTCTCAGATTCGTCCCGAGGCTGAAGATGCGGCCTACTC TCCTGCAAAGTCCAGGTCGACAGGATCCAGGCCCACAGCATCAAAACCCTCCCGACCCCAAGGCAATCCCTCAGCCACCA GAACAGAAGCCGCGCCTCCTTCATCATCAGTGCCTGCGCCAGGACGCTCAGCTCCGCGAAGTTCAAGACCTCGCGACAAC AGTTCCCGTTTTGACGACTGA
Upstream 100 bases:
>100_bases GTTGACCGAAACTTCAAAGCACCCTTGGCGCACTTCGTAGACTGAGCTCAACGAGGTTGGTTTTCAACCTCCTGTTCAGG CGTTTTCAGGGGGCGCAATT
Downstream 100 bases:
>100_bases AGCCCATTGCCAACAACCTGCAGCAACTGATCCTGCTTTTTGGCTGCCTGGGCCTTGGGAGCTGCATCAATTCGATTGAG AAAGCACCAGGTGGCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MVNASLNWGSIVGIVLAVGGALLYFMRSFKPALARDYDVFFAAIGLLCGGVFFFQGWRLDPILQFGVFLLAGTTMFFAYE SVRLRGVAVEGARRSSYFDDEPAPPINQGRDGGLRGGWDEPYDRFEEPQPVRRRFSSRDNNDADRPQEDLYRPRRTTRAA IPEQAASRRRNKEEESWGEDSERSRRMARFGRQDDEQNNRSDFGERRNVRQDQRRGSRPSANQQTTNRTQLSNEPRPTSR GGYASSRKPGVPQGSQIRPEAEDAAYSPAKSRSTGSRPTASKPSRPQGNPSATRTEAAPPSSSVPAPGRSAPRSSRPRDN SSRFDD
Sequences:
>Translated_326_residues MVNASLNWGSIVGIVLAVGGALLYFMRSFKPALARDYDVFFAAIGLLCGGVFFFQGWRLDPILQFGVFLLAGTTMFFAYE SVRLRGVAVEGARRSSYFDDEPAPPINQGRDGGLRGGWDEPYDRFEEPQPVRRRFSSRDNNDADRPQEDLYRPRRTTRAA IPEQAASRRRNKEEESWGEDSERSRRMARFGRQDDEQNNRSDFGERRNVRQDQRRGSRPSANQQTTNRTQLSNEPRPTSR GGYASSRKPGVPQGSQIRPEAEDAAYSPAKSRSTGSRPTASKPSRPQGNPSATRTEAAPPSSSVPAPGRSAPRSSRPRDN SSRFDD >Mature_326_residues MVNASLNWGSIVGIVLAVGGALLYFMRSFKPALARDYDVFFAAIGLLCGGVFFFQGWRLDPILQFGVFLLAGTTMFFAYE SVRLRGVAVEGARRSSYFDDEPAPPINQGRDGGLRGGWDEPYDRFEEPQPVRRRFSSRDNNDADRPQEDLYRPRRTTRAA IPEQAASRRRNKEEESWGEDSERSRRMARFGRQDDEQNNRSDFGERRNVRQDQRRGSRPSANQQTTNRTQLSNEPRPTSR GGYASSRKPGVPQGSQIRPEAEDAAYSPAKSRSTGSRPTASKPSRPQGNPSATRTEAAPPSSSVPAPGRSAPRSSRPRDN SSRFDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ycf66 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010004 [H]
Pfam domain/function: PF07444 Ycf66_N [H]
EC number: NA
Molecular weight: Translated: 36441; Mature: 36441
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNASLNWGSIVGIVLAVGGALLYFMRSFKPALARDYDVFFAAIGLLCGGVFFFQGWRLD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PILQFGVFLLAGTTMFFAYESVRLRGVAVEGARRSSYFDDEPAPPINQGRDGGLRGGWDE HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC PYDRFEEPQPVRRRFSSRDNNDADRPQEDLYRPRRTTRAAIPEQAASRRRNKEEESWGED HHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCH SERSRRMARFGRQDDEQNNRSDFGERRNVRQDQRRGSRPSANQQTTNRTQLSNEPRPTSR HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHCCCCCCCCCC GGYASSRKPGVPQGSQIRPEAEDAAYSPAKSRSTGSRPTASKPSRPQGNPSATRTEAAPP CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SSSVPAPGRSAPRSSRPRDNSSRFDD CCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVNASLNWGSIVGIVLAVGGALLYFMRSFKPALARDYDVFFAAIGLLCGGVFFFQGWRLD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PILQFGVFLLAGTTMFFAYESVRLRGVAVEGARRSSYFDDEPAPPINQGRDGGLRGGWDE HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC PYDRFEEPQPVRRRFSSRDNNDADRPQEDLYRPRRTTRAAIPEQAASRRRNKEEESWGED HHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCH SERSRRMARFGRQDDEQNNRSDFGERRNVRQDQRRGSRPSANQQTTNRTQLSNEPRPTSR HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHCCCCCCCCCC GGYASSRKPGVPQGSQIRPEAEDAAYSPAKSRSTGSRPTASKPSRPQGNPSATRTEAAPP CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SSSVPAPGRSAPRSSRPRDNSSRFDD CCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]