| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124022029
Identifier: 124022029
GI number: 124022029
Start: 330305
End: 330706
Strand: Reverse
Name: 124022029
Synonym: P9303_03181
Alternate gene names: NA
Gene position: 330706-330305 (Counterclockwise)
Preceding gene: 124022030
Following gene: 124022028
Centisome position: 12.33
GC content: 55.97
Gene sequence:
>402_bases ATGCTGGCAGTGATCGTCGATCAGCGAGGCCGGCCAACCGTTCAGCTCCGCGATCTTAGAGACGGAAAGATCATGCCACT ACGCCATTTCTCCCGTCACCAACCTCACAGTTCTCCCTCCCTGAGCTGGAATGGACGCTATCTGGCAGTGATCACACAAA AAGGCAATCGGCGCCTAACGATCATCGAAGATCGTCTAACCGGAAGAATCCACCAGCTTCCCCTACCGGGGGGGAGAGAT CCTGTGAGCCTCAGCCTGTCACCAGATGCTCGCCAGTTAGCTCTGCAAGTGGCCGATCAGGGCCATTGGCGCGTAGAGCT CTTCGATCTATCCCAAATCCTTGAGCCTGATCCAATCAGAGGGCTGAAGCGCTCAACTCCAACGAAAGAGGGTAGACCGT GA
Upstream 100 bases:
>100_bases CTGCCTGGGCCTTGGGAGCTGCATCAATTCGATTGAGAAAGCACCAGGTGGCCTGCTTCAGCGCAGCCAGCAAGACCCGG CCCTCAGCGGCAATGGCGAA
Downstream 100 bases:
>100_bases AATATGGGCTCTTACGAGATCTGCCGAGTTGGCTTGCAACTCTGCTTCTTTGCTTTGGGCTGGTTGCTTGCGGAAGAGAA GGATTGAGGCCACTCCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MLAVIVDQRGRPTVQLRDLRDGKIMPLRHFSRHQPHSSPSLSWNGRYLAVITQKGNRRLTIIEDRLTGRIHQLPLPGGRD PVSLSLSPDARQLALQVADQGHWRVELFDLSQILEPDPIRGLKRSTPTKEGRP
Sequences:
>Translated_133_residues MLAVIVDQRGRPTVQLRDLRDGKIMPLRHFSRHQPHSSPSLSWNGRYLAVITQKGNRRLTIIEDRLTGRIHQLPLPGGRD PVSLSLSPDARQLALQVADQGHWRVELFDLSQILEPDPIRGLKRSTPTKEGRP >Mature_133_residues MLAVIVDQRGRPTVQLRDLRDGKIMPLRHFSRHQPHSSPSLSWNGRYLAVITQKGNRRLTIIEDRLTGRIHQLPLPGGRD PVSLSLSPDARQLALQVADQGHWRVELFDLSQILEPDPIRGLKRSTPTKEGRP
Specific function: Unknown
COG id: COG0823
COG function: function code U; Periplasmic component of the Tol biopolymer transport system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15103; Mature: 15103
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAVIVDQRGRPTVQLRDLRDGKIMPLRHFSRHQPHSSPSLSWNGRYLAVITQKGNRRLT CEEEEEECCCCCCEEEEECCCCCEEECHHCCCCCCCCCCCCEECCEEEEEEEECCCCEEE IIEDRLTGRIHQLPLPGGRDPVSLSLSPDARQLALQVADQGHWRVELFDLSQILEPDPIR EEECCCCCEEEECCCCCCCCCEEEEECCCHHHEEEEECCCCCEEEEEEEHHHHCCCCCCC GLKRSTPTKEGRP CCCCCCCCCCCCC >Mature Secondary Structure MLAVIVDQRGRPTVQLRDLRDGKIMPLRHFSRHQPHSSPSLSWNGRYLAVITQKGNRRLT CEEEEEECCCCCCEEEEECCCCCEEECHHCCCCCCCCCCCCEECCEEEEEEEECCCCEEE IIEDRLTGRIHQLPLPGGRDPVSLSLSPDARQLALQVADQGHWRVELFDLSQILEPDPIR EEECCCCCEEEECCCCCCCCCEEEEECCCHHHEEEEECCCCCEEEEEEEHHHHCCCCCCC GLKRSTPTKEGRP CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA