| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021976
Identifier: 124021976
GI number: 124021976
Start: 274660
End: 275085
Strand: Direct
Name: 124021976
Synonym: P9303_02631
Alternate gene names: NA
Gene position: 274660-275085 (Clockwise)
Preceding gene: 124021975
Following gene: 124021977
Centisome position: 10.24
GC content: 51.64
Gene sequence:
>426_bases ATGCATCAGGAGCAGGCGCTAATGGTTTCTGGAACTTGGTCGAGTGGTGAAGATGTGACGTCTCGCTTGGCGGAACGGGA GGCCACTCTCAACCTGCGCAGCGAGGCCGAAGCGTTGTTGTTGTCTTTCACCCGAGCTCAGATGACACGTTTCTATTGGG GTGAGTTTGCCTCGTCGTTGGATGAGCTGGGCCTGACTGTTGGAGAACCTCTCATCGCACATGTGCAACGATCAAAAAAC CTCACCATGTTGTGGCTGGCTCCTCAACATGGTGAGGAAGCCTATTTAGCCATTGTTCGTCGTGACAGCAGCGGCACTAG GCTCGAGAGACTTCATTGCAGAGGCAATGTTTCCAGGTTGAAGCAACCCTTTTTGGGTCGTTGCCCAGATGGATGGAGTG CATTTTTGCCTTTAAAAAACATTTGA
Upstream 100 bases:
>100_bases GAGGGTCATTGTTGAGACGCTCATGCTCGGCATGCTGAGCTCACAGAAAGCCCCATCGCTTGTAGCCGCAGTCCTTTTGG CAGTGATGGGTTTGTTGGGG
Downstream 100 bases:
>100_bases ATATTGCGACATCAACTTGATTAGGCCTCTTAACTATTGGGGCACGACGAGATTCGCGATCTTTCAGCCTTGGTGCAAGA ACAGTTTGATTACGGTCTGA
Product: thymidylate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MHQEQALMVSGTWSSGEDVTSRLAEREATLNLRSEAEALLLSFTRAQMTRFYWGEFASSLDELGLTVGEPLIAHVQRSKN LTMLWLAPQHGEEAYLAIVRRDSSGTRLERLHCRGNVSRLKQPFLGRCPDGWSAFLPLKNI
Sequences:
>Translated_141_residues MHQEQALMVSGTWSSGEDVTSRLAEREATLNLRSEAEALLLSFTRAQMTRFYWGEFASSLDELGLTVGEPLIAHVQRSKN LTMLWLAPQHGEEAYLAIVRRDSSGTRLERLHCRGNVSRLKQPFLGRCPDGWSAFLPLKNI >Mature_141_residues MHQEQALMVSGTWSSGEDVTSRLAEREATLNLRSEAEALLLSFTRAQMTRFYWGEFASSLDELGLTVGEPLIAHVQRSKN LTMLWLAPQHGEEAYLAIVRRDSSGTRLERLHCRGNVSRLKQPFLGRCPDGWSAFLPLKNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15915; Mature: 15915
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQEQALMVSGTWSSGEDVTSRLAEREATLNLRSEAEALLLSFTRAQMTRFYWGEFASSL CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DELGLTVGEPLIAHVQRSKNLTMLWLAPQHGEEAYLAIVRRDSSGTRLERLHCRGNVSRL HHCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHCCCCHHHH KQPFLGRCPDGWSAFLPLKNI CCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure MHQEQALMVSGTWSSGEDVTSRLAEREATLNLRSEAEALLLSFTRAQMTRFYWGEFASSL CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DELGLTVGEPLIAHVQRSKNLTMLWLAPQHGEEAYLAIVRRDSSGTRLERLHCRGNVSRL HHCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHCCCCHHHH KQPFLGRCPDGWSAFLPLKNI CCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA