| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is bcp [H]
Identifier: 124021974
GI number: 124021974
Start: 273438
End: 273905
Strand: Reverse
Name: bcp [H]
Synonym: P9303_02611
Alternate gene names: 124021974
Gene position: 273905-273438 (Counterclockwise)
Preceding gene: 124021978
Following gene: 124021971
Centisome position: 10.21
GC content: 50.21
Gene sequence:
>468_bases ATGACCCTGCAGATTGGTGATCCAGCACCAGATTTCAATCTCCCCAATCAGGACGGCACCCTCGTTCAGCTGGCATCACT AAGAGGTCAACGGGTTGTGATCTACTTCTATCCGAAGGACGACACCCCTGGCTGCACGAAGGAAGCCTGCAATTTCCGAG ACCAATGGGAACGCTTCGAGGCCAATGACATCAAGGTGCTTGGTATCAGCAAAGACGGTGCTACATCCCACACCAAATTC ATCAACAAGTATCAGATTCCTTTCACCCTTCTTAGCGACACGGAACCCTGCCCAGTGGCCAGCTCCTACGAAAGCTATGG GCTCAAAAAATTCATGGGACGCGAATACATGGGAATGATGCGCCATAGCTTTGTCGTAGATCCAAAGGGCAATCTGGAAC TGATTTATCTAAAGGTGAAAGCCGCAACCATGGCCGATCAAATCCTCAAAGACTTGGGGCTCGACTAA
Upstream 100 bases:
>100_bases GCCCATTGCTCCTCCTCCGTACTGATAGGCATCAAGGGAGCCTGCATCGGAAATAACCACAACGCCAGTACGCTTCTGCT ATTGAGTTGAAGCGGCATCA
Downstream 100 bases:
>100_bases TCCGATCGTGCACGTCAACCATCCCCTCCAAGACAAGATTCGGATGATGCACCACATCAAGACCCCTCTGACTGAGTGCT TCCTTAAGAACCGAGGCATC
Product: bacterioferritin comigratory (BCP) protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTLQIGDPAPDFNLPNQDGTLVQLASLRGQRVVIYFYPKDDTPGCTKEACNFRDQWERFEANDIKVLGISKDGATSHTKF INKYQIPFTLLSDTEPCPVASSYESYGLKKFMGREYMGMMRHSFVVDPKGNLELIYLKVKAATMADQILKDLGLD
Sequences:
>Translated_155_residues MTLQIGDPAPDFNLPNQDGTLVQLASLRGQRVVIYFYPKDDTPGCTKEACNFRDQWERFEANDIKVLGISKDGATSHTKF INKYQIPFTLLSDTEPCPVASSYESYGLKKFMGREYMGMMRHSFVVDPKGNLELIYLKVKAATMADQILKDLGLD >Mature_154_residues TLQIGDPAPDFNLPNQDGTLVQLASLRGQRVVIYFYPKDDTPGCTKEACNFRDQWERFEANDIKVLGISKDGATSHTKFI NKYQIPFTLLSDTEPCPVASSYESYGLKKFMGREYMGMMRHSFVVDPKGNLELIYLKVKAATMADQILKDLGLD
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=147, Percent_Identity=42.8571428571429, Blast_Score=124, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6322180, Length=93, Percent_Identity=44.0860215053763, Blast_Score=84, Evalue=7e-18,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17495; Mature: 17364
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLQIGDPAPDFNLPNQDGTLVQLASLRGQRVVIYFYPKDDTPGCTKEACNFRDQWERFE CEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCHHHCCCHHHHHHCC ANDIKVLGISKDGATSHTKFINKYQIPFTLLSDTEPCPVASSYESYGLKKFMGREYMGMM CCCEEEEEECCCCCCCHHHHHHEECCCEEEECCCCCCCCCCCHHHCCHHHHHHHHHHHHH RHSFVVDPKGNLELIYLKVKAATMADQILKDLGLD HHEEEECCCCCEEEEEEEEEHHHHHHHHHHHHCCC >Mature Secondary Structure TLQIGDPAPDFNLPNQDGTLVQLASLRGQRVVIYFYPKDDTPGCTKEACNFRDQWERFE EEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCHHHCCCHHHHHHCC ANDIKVLGISKDGATSHTKFINKYQIPFTLLSDTEPCPVASSYESYGLKKFMGREYMGMM CCCEEEEEECCCCCCCHHHHHHEECCCEEEECCCCCCCCCCCHHHCCHHHHHHHHHHHHH RHSFVVDPKGNLELIYLKVKAATMADQILKDLGLD HHEEEECCCCCEEEEEEEEEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]