| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021935
Identifier: 124021935
GI number: 124021935
Start: 239064
End: 240461
Strand: Direct
Name: 124021935
Synonym: P9303_02221
Alternate gene names: NA
Gene position: 239064-240461 (Clockwise)
Preceding gene: 124021934
Following gene: 124021936
Centisome position: 8.91
GC content: 52.86
Gene sequence:
>1398_bases GTGTGGAATGAGCCCTCCGCTGGTGTTGCGGTGTCAGCATTGGACCCTGAATCTGCGGCGGGCCAACCCCGACCTGCAGT GGTTGCATCGGTTGAACAGGGATCGATCGGAGAGCAATTGGGCTTTGAGCCCGGCGATCAACTTTTAAGTGTTAATGGGG TGCGACCAAGGGATCTGATTGATTATCGCTACCTCATCGTTGAGGAGGAGCTTCATCTCGAAGTCAGGGATGCAACCGGG GCATTCCATCAAGTGGATCTTGAGAAAGACTCTGATGATGGTTTGGGTTTGGCTTTTACAGAAGCCTTATTTGATGGGCT TCGCCAGTGCAACAACCACTGTCCTTTCTGCTTCATTGATCAGCAGCCACTTGGCCGACGCAACAGCCTCTATCTCAAGG ACGATGATTATCGCCTCAGTTTTCTCTATGGGTCTTATCTGACTCTTACCAATCTTAAAGAGGCAGATTGGCAAAGGATC GAGGCACAGCGCCTTTCCCCTCTTTTTGTTTCTGTCCATGCCACTGAGCCATCCTTGAGGGCTCAGTTACTCAAAAATCC CCGCGCGGGACTTCTGCTTGAGCAGTTGGAGTGGTTCACTGAGCGCGATCTTCAGGTCCATGCCCAGGTGGTGGTTTGCC CTGGCTTGAATGACGGTTTGGCTCTAGATCGCACCTTGCGTGAGCTTGCTGATTTTGGAACGGGTGATTGGCCTGCTGTG CTTTCAGTGGCGGTGGTGCCGGTGGGATTGACCCGTTTCCGTCCAGCAGAAGATGGATTGTTGCCTGTTGGTTCTGCTTG TGCAAGGCGTGTGATTAGCCAGGTTGAGCTTCTTCAGGATCAGTTTCAGGCTGTTATGGGAACCCGTTTCGCGTGGCTTT CGGATGAGTGGTATCTGATTGCAGGTGAGCCTCTTCCACCTCGCAGTACCTACGAGGATCTCCCACAACAAGAAAATGGC GTTGGCAGTATCCGCTCCTTTTTGGAAGATCTTGACCAGGCCACGGTCATTCTTCCCAAGCGGTTAAGGCAGCCCAGGCG CTGCAGTTGGGTGGTAGGTCGCTTGGTCGAACAGGCTCTGGGTCCTGCTTGTGAACGACTCAATGCGGTTGAAGGTTTGG CAGTGGAGTTATATGGGCTGCCGAGTCCTTATTGGGGGCAGGATCAGGTTGTAACCGGTTTGCTCACTGGTCATGACTTG CTTGAGGGATTGAAGGCTCTTGATCTTGGCGATCAGTTACTTCTGCCTTCAGTGATGCTGCGACAGGGTGAGCTTGTGTT TCTAGATGACATGACTCTGGAACAGCTAAGTGAGGCGCTACAGATCTCGATACGTATCGTGCATGGGGCGGCTGACATCG TGGCCGCTGCGATGGGAGATGGCCAGGAAATTCATTAA
Upstream 100 bases:
>100_bases CACTTGGATCTTCGTGGCCTATCGCTTGTTGTTTGGGGTGTTAGTGCTCGCCTGGTGGCTGAGCGACACATCAAACTAAA ACAAACCGCCCTCCTCATTT
Downstream 100 bases:
>100_bases GCTCCCCGCAGTTTTCAAATTGCTGTGCGTCTGATTACCGCAAGACTGTTTCTCCTTGCAGGCGTATTGGCTCAAGGGTG CACTGGTGTTCTAGCTCAAC
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MWNEPSAGVAVSALDPESAAGQPRPAVVASVEQGSIGEQLGFEPGDQLLSVNGVRPRDLIDYRYLIVEEELHLEVRDATG AFHQVDLEKDSDDGLGLAFTEALFDGLRQCNNHCPFCFIDQQPLGRRNSLYLKDDDYRLSFLYGSYLTLTNLKEADWQRI EAQRLSPLFVSVHATEPSLRAQLLKNPRAGLLLEQLEWFTERDLQVHAQVVVCPGLNDGLALDRTLRELADFGTGDWPAV LSVAVVPVGLTRFRPAEDGLLPVGSACARRVISQVELLQDQFQAVMGTRFAWLSDEWYLIAGEPLPPRSTYEDLPQQENG VGSIRSFLEDLDQATVILPKRLRQPRRCSWVVGRLVEQALGPACERLNAVEGLAVELYGLPSPYWGQDQVVTGLLTGHDL LEGLKALDLGDQLLLPSVMLRQGELVFLDDMTLEQLSEALQISIRIVHGAADIVAAAMGDGQEIH
Sequences:
>Translated_465_residues MWNEPSAGVAVSALDPESAAGQPRPAVVASVEQGSIGEQLGFEPGDQLLSVNGVRPRDLIDYRYLIVEEELHLEVRDATG AFHQVDLEKDSDDGLGLAFTEALFDGLRQCNNHCPFCFIDQQPLGRRNSLYLKDDDYRLSFLYGSYLTLTNLKEADWQRI EAQRLSPLFVSVHATEPSLRAQLLKNPRAGLLLEQLEWFTERDLQVHAQVVVCPGLNDGLALDRTLRELADFGTGDWPAV LSVAVVPVGLTRFRPAEDGLLPVGSACARRVISQVELLQDQFQAVMGTRFAWLSDEWYLIAGEPLPPRSTYEDLPQQENG VGSIRSFLEDLDQATVILPKRLRQPRRCSWVVGRLVEQALGPACERLNAVEGLAVELYGLPSPYWGQDQVVTGLLTGHDL LEGLKALDLGDQLLLPSVMLRQGELVFLDDMTLEQLSEALQISIRIVHGAADIVAAAMGDGQEIH >Mature_465_residues MWNEPSAGVAVSALDPESAAGQPRPAVVASVEQGSIGEQLGFEPGDQLLSVNGVRPRDLIDYRYLIVEEELHLEVRDATG AFHQVDLEKDSDDGLGLAFTEALFDGLRQCNNHCPFCFIDQQPLGRRNSLYLKDDDYRLSFLYGSYLTLTNLKEADWQRI EAQRLSPLFVSVHATEPSLRAQLLKNPRAGLLLEQLEWFTERDLQVHAQVVVCPGLNDGLALDRTLRELADFGTGDWPAV LSVAVVPVGLTRFRPAEDGLLPVGSACARRVISQVELLQDQFQAVMGTRFAWLSDEWYLIAGEPLPPRSTYEDLPQQENG VGSIRSFLEDLDQATVILPKRLRQPRRCSWVVGRLVEQALGPACERLNAVEGLAVELYGLPSPYWGQDQVVTGLLTGHDL LEGLKALDLGDQLLLPSVMLRQGELVFLDDMTLEQLSEALQISIRIVHGAADIVAAAMGDGQEIH
Specific function: Unknown
COG id: COG1625
COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51379; Mature: 51379
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWNEPSAGVAVSALDPESAAGQPRPAVVASVEQGSIGEQLGFEPGDQLLSVNGVRPRDLI CCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCCEEEECCCCCHHHH DYRYLIVEEELHLEVRDATGAFHQVDLEKDSDDGLGLAFTEALFDGLRQCNNHCPFCFID CEEEEEEEEEHEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEC QQPLGRRNSLYLKDDDYRLSFLYGSYLTLTNLKEADWQRIEAQRLSPLFVSVHATEPSLR CCCCCCCCCEEEECCCEEEEEEECCEEEECCCCHHHHHHHHHHCCCEEEEEEECCCHHHH AQLLKNPRAGLLLEQLEWFTERDLQVHAQVVVCPGLNDGLALDRTLRELADFGTGDWPAV HHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHH LSVAVVPVGLTRFRPAEDGLLPVGSACARRVISQVELLQDQFQAVMGTRFAWLSDEWYLI HHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEE AGEPLPPRSTYEDLPQQENGVGSIRSFLEDLDQATVILPKRLRQPRRCSWVVGRLVEQAL ECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHEEECHHHCCCCHHHHHHHHHHHHHHH GPACERLNAVEGLAVELYGLPSPYWGQDQVVTGLLTGHDLLEGLKALDLGDQLLLPSVML CHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RQGELVFLDDMTLEQLSEALQISIRIVHGAADIVAAAMGDGQEIH CCCCEEEEECCCHHHHHHHHEEEEEEEECHHHHHHHHCCCCCCCC >Mature Secondary Structure MWNEPSAGVAVSALDPESAAGQPRPAVVASVEQGSIGEQLGFEPGDQLLSVNGVRPRDLI CCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCCEEEECCCCCHHHH DYRYLIVEEELHLEVRDATGAFHQVDLEKDSDDGLGLAFTEALFDGLRQCNNHCPFCFID CEEEEEEEEEHEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEC QQPLGRRNSLYLKDDDYRLSFLYGSYLTLTNLKEADWQRIEAQRLSPLFVSVHATEPSLR CCCCCCCCCEEEECCCEEEEEEECCEEEECCCCHHHHHHHHHHCCCEEEEEEECCCHHHH AQLLKNPRAGLLLEQLEWFTERDLQVHAQVVVCPGLNDGLALDRTLRELADFGTGDWPAV HHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHH LSVAVVPVGLTRFRPAEDGLLPVGSACARRVISQVELLQDQFQAVMGTRFAWLSDEWYLI HHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEE AGEPLPPRSTYEDLPQQENGVGSIRSFLEDLDQATVILPKRLRQPRRCSWVVGRLVEQAL ECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHEEECHHHCCCCHHHHHHHHHHHHHHH GPACERLNAVEGLAVELYGLPSPYWGQDQVVTGLLTGHDLLEGLKALDLGDQLLLPSVML CHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RQGELVFLDDMTLEQLSEALQISIRIVHGAADIVAAAMGDGQEIH CCCCEEEEECCCHHHHHHHHEEEEEEEECHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA