Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is scrK [H]

Identifier: 124021886

GI number: 124021886

Start: 193567

End: 194607

Strand: Direct

Name: scrK [H]

Synonym: P9303_01731

Alternate gene names: 124021886

Gene position: 193567-194607 (Clockwise)

Preceding gene: 124021885

Following gene: 124021888

Centisome position: 7.22

GC content: 57.16

Gene sequence:

>1041_bases
ATGACGGGGACCAATCCGGTTCACAGCAACGAGCCTGAGGTGATTTGCTTGGGCGAGGCGTTGGTGGATCGTCTTGGACC
TCTGGGGGGAGATCCAGTTGTGGATCAGCCTGTGGAAGATTGCCTAGGGGGAGCCCCTGCCAACGTGGCTTGTGGCTTAG
CTCGGCTTGGTAGCAAGGTGGCTTTTTTAGGACGTCTTGGAGACGATTCCATCGGGGCCAGGTTTCGAGAATTGTTTGAT
ACTCGAGGCGTGAACCTTGCTGGTCTGCAGACCGATCTGCGTCGGCCAAGTCGCATTGTGTTGGTGCGTCGTGATCTCGA
TGGGGAGAGGGTTTTCCAGGGTTTTGCAGGCGACCGCGGAGACGGTTTTGCTGATCAGGCTCTGTCTTTAGATGAGTTGG
CGGCCAGCTGGCCTTTGCTGGTAGGTAAGGCGAGCTGGTTGTTGATCGGCTCCATTCCTTTGGCCACACCAGCTTCCGCC
CAAGCCTTGCTTTGGTGCGTTGAGCAGGCACAAACAGCAGGGATTGAGATAGCCCTGGATGTCAACTGGCGTTCAACCTT
CTGGGATCCTGGCCGTTCTCCCGATAGTGGCCCTGATGAGAAGGCCTTGCAGGCGATTGCGCCGCTTCTTGAGCGTGCTT
CTCTGCTCAAACTGGCTAGGGAAGAGGCCGTTTGGTTCTTTGACACTGACGACCCTGCAGTGATTGCGCGATCCCTTCCG
CAGCAGCCGGATGTGGTTGTGACCGATGGGGCGCGTCCGGTGCGGTGGTGGATAGGGGGTTGTGTTGGTGAGCTTGCAGC
GCTTTCTCCCCCTTCAGTTGTCGACACCACGGGTGCTGGCGATGCTTTCACTGCAGGATTGCTGCATCAATTGTTGATGG
ATGTCTCATCTCAACGAGATTCGATCAAGGTCCGGGAGATGGTTCGTTTTGCTGCAGCCTGTGGTGCGCTTGTTTGTGGA
GGGGCTGGTGGTATCGATCCGCAGCCGTCTCAGATGCAAGTGGAGGAGTTTTTGGGGTCGGTCGCAGGTGACGTGAACTG
A

Upstream 100 bases:

>100_bases
CCCGGCAGCCAATGCGCGCATGATTGCCGCGTTGATTGATCATCTTCGCGCAGACACGCTTGGCCAGCGTTCCTAGCTTC
AACTCAGTAGCTGCTAACTG

Downstream 100 bases:

>100_bases
GCCAGACGACCTCCTTGAGCTCGATGCTGCAATTGCAATCTCCAGGCTTCAGGCAAGTTCAGGCTTAATCGATCAGGCCA
TTCCACGGCCATGAGGGCAC

Product: carbohydrate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MTGTNPVHSNEPEVICLGEALVDRLGPLGGDPVVDQPVEDCLGGAPANVACGLARLGSKVAFLGRLGDDSIGARFRELFD
TRGVNLAGLQTDLRRPSRIVLVRRDLDGERVFQGFAGDRGDGFADQALSLDELAASWPLLVGKASWLLIGSIPLATPASA
QALLWCVEQAQTAGIEIALDVNWRSTFWDPGRSPDSGPDEKALQAIAPLLERASLLKLAREEAVWFFDTDDPAVIARSLP
QQPDVVVTDGARPVRWWIGGCVGELAALSPPSVVDTTGAGDAFTAGLLHQLLMDVSSQRDSIKVREMVRFAAACGALVCG
GAGGIDPQPSQMQVEEFLGSVAGDVN

Sequences:

>Translated_346_residues
MTGTNPVHSNEPEVICLGEALVDRLGPLGGDPVVDQPVEDCLGGAPANVACGLARLGSKVAFLGRLGDDSIGARFRELFD
TRGVNLAGLQTDLRRPSRIVLVRRDLDGERVFQGFAGDRGDGFADQALSLDELAASWPLLVGKASWLLIGSIPLATPASA
QALLWCVEQAQTAGIEIALDVNWRSTFWDPGRSPDSGPDEKALQAIAPLLERASLLKLAREEAVWFFDTDDPAVIARSLP
QQPDVVVTDGARPVRWWIGGCVGELAALSPPSVVDTTGAGDAFTAGLLHQLLMDVSSQRDSIKVREMVRFAAACGALVCG
GAGGIDPQPSQMQVEEFLGSVAGDVN
>Mature_345_residues
TGTNPVHSNEPEVICLGEALVDRLGPLGGDPVVDQPVEDCLGGAPANVACGLARLGSKVAFLGRLGDDSIGARFRELFDT
RGVNLAGLQTDLRRPSRIVLVRRDLDGERVFQGFAGDRGDGFADQALSLDELAASWPLLVGKASWLLIGSIPLATPASAQ
ALLWCVEQAQTAGIEIALDVNWRSTFWDPGRSPDSGPDEKALQAIAPLLERASLLKLAREEAVWFFDTDDPAVIARSLPQ
QPDVVVTDGARPVRWWIGGCVGELAALSPPSVVDTTGAGDAFTAGLLHQLLMDVSSQRDSIKVREMVRFAAACGALVCGG
AGGIDPQPSQMQVEEFLGSVAGDVN

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.4 [H]

Molecular weight: Translated: 36499; Mature: 36368

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTNPVHSNEPEVICLGEALVDRLGPLGGDPVVDQPVEDCLGGAPANVACGLARLGSKV
CCCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCHH
AFLGRLGDDSIGARFRELFDTRGVNLAGLQTDLRRPSRIVLVRRDLDGERVFQGFAGDRG
EEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHCCCCEEEEEEECCCHHHHHHHCCCCCC
DGFADQALSLDELAASWPLLVGKASWLLIGSIPLATPASAQALLWCVEQAQTAGIEIALD
CCHHHHHCCHHHHHHCCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEE
VNWRSTFWDPGRSPDSGPDEKALQAIAPLLERASLLKLAREEAVWFFDTDDPAVIARSLP
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHCC
QQPDVVVTDGARPVRWWIGGCVGELAALSPPSVVDTTGAGDAFTAGLLHQLLMDVSSQRD
CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCC
SIKVREMVRFAAACGALVCGGAGGIDPQPSQMQVEEFLGSVAGDVN
HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TGTNPVHSNEPEVICLGEALVDRLGPLGGDPVVDQPVEDCLGGAPANVACGLARLGSKV
CCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCHH
AFLGRLGDDSIGARFRELFDTRGVNLAGLQTDLRRPSRIVLVRRDLDGERVFQGFAGDRG
EEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHCCCCEEEEEEECCCHHHHHHHCCCCCC
DGFADQALSLDELAASWPLLVGKASWLLIGSIPLATPASAQALLWCVEQAQTAGIEIALD
CCHHHHHCCHHHHHHCCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEE
VNWRSTFWDPGRSPDSGPDEKALQAIAPLLERASLLKLAREEAVWFFDTDDPAVIARSLP
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHCC
QQPDVVVTDGARPVRWWIGGCVGELAALSPPSVVDTTGAGDAFTAGLLHQLLMDVSSQRD
CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCC
SIKVREMVRFAAACGALVCGGAGGIDPQPSQMQVEEFLGSVAGDVN
HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2174811 [H]