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The map label for this gene is rfbH [H]

Identifier: 124021854

GI number: 124021854

Start: 154830

End: 156374

Strand: Direct

Name: rfbH [H]

Synonym: P9303_01411

Alternate gene names: 124021854

Gene position: 154830-156374 (Clockwise)

Preceding gene: 124021853

Following gene: 124021855

Centisome position: 5.77

GC content: 48.67

Gene sequence:

>1545_bases
ATGGCGAGTCCAGCAGAACTCGAAGCGCTTAAAGCTGAAATCCTTGCATTGACGCGCCGTTATGCAGCATCTGCACATCG
TGCTTTTCGTCCCGCAGGAGACCCTTTAAGACCTGCCTTTGATTTAAAAGGAGGATCCATTCCCTATGCAGGCCGTGTGT
TTACTGAAGATGAGGTGGAGGCTGCAGTCAGCAGCACTCTTGATTTTTGGCTCACTCTTGGCAATGAGGGAGAGGCCTTT
CAAAAAGAACTCGCTGGTTTTTTGGGGGTTAGGGCTTGCCTAGCAGTCAACTCTGGCTCTTCGGCCAACCTATTGGCCTT
GTCTGCGCTGACATCACATTTGCTCCCTGCGTCGAAGAGGCTGCAGCCCGGTGATGAAGTGATCACTTGTGCTGCCGGTT
TTCCAACGACCGTGACCCCAATTTTTCAGAACGGTTGTATTCCTGTTTTTATTGATAACGATCCTTTAACAGGCAATTTG
AAGGTTGATCAGCTTGAAGCTGCCTTTGTTCCTGGGCGAACCAAGGCCGTGATGGCTGCTCATGCACTTGGTAATCCCTT
TGATTTGGGAGGTGTGTTGTCATTTTGTCGTCAACATGATCTATGGCTCATTGAGGACAACTGCGATGCCCTTGGATGCA
GTTACACCATGCCGAGAGAGCAGGCAGAAGAGCTTGGATTTGATCAGAACAGTCCAGGATTAGATGCTGGCGATGCCCAT
GTGATTCGTTGGACAGGTACCTGGGGAGATATCAGTACTCAGAGTTTTTATCCACCCCATCACTTAACGATGGGAGAAGG
GGGAGCAGTCAACATCGTGGAAAGTTCTTTATTGAGGCGCATCGTTGAAAGTTTTCGCGATTGGGGTCGTGACTGTTGGT
GCCCAAGTGGACGTGATGACACATGCTCCAAGCGATATGACTGGCAATTGGGTGAGCTTCCTAAGGGGTATGACCATAAG
TACATTTATTCTCACTTTGGCTACAACCTCAAACCACTAGATCCTCAGGCTGCAATCGGCCGCATTCAGATTCGTCGGTT
GCCAGATTTTATTGAGATGCGTAAATGCAATTGGCAGCGATTGCGACAGGGATTAGATCACTTGAGTGATGTCTTTAATT
TTTGCCTGCCGACACATGCCACGAGATTTGAATCCTCTAGTGGGTCTTTCGCTTGGGACAGTAGTGGAGCAAGCACTGAT
TGCAGTTGGTTTGGCTTTTTGCTTCTTGTTCGCCCAGAGGCGCCTTTCACCAGCTCAGAGCTTGGTCGCCATCTTGCCGA
CAATGGAGTGGGGACCAGGATGCTGTTTGGCGGGAATTTGTTAAAGCAGCCTGCCTTTGTGCAATTGCGTAAGGATCGAC
CCGATGCCATGCGATTGGCTATGCCTGAGATGCCAGGGGCAGATCAATTGATGCAAGAAGCTTTGTTCCTAGGAACTTAT
CCAGGCCTATCAGAGGAAATGATTGATCGAGAATTGGCTTTGATTTCTGCTTTTGTTGAGGAGAAAAAATATAATATTAG
CCAACCCAATACTGCGATCTCATGA

Upstream 100 bases:

>100_bases
GCCAATTGTGCCTTGAACAGATCGATCGCTACGTGAAGGGCTGATAATTTGCCCTTAGTAATGGTTGCTGTTGTTGTCTG
TTCCAATTAGCGCTGAATCA

Downstream 100 bases:

>100_bases
GTGGGAATGCTCTTCTGTTTGGGTCGCGCGGCGCTCTAGGCTCTGAAATTGAAAAGGTAATGAAGCAGAAAAGCTTTCGT
GTTTTGACTGCTGGCTCAGG

Product: NDP-hexose 3,4-dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 513

Protein sequence:

>514_residues
MASPAELEALKAEILALTRRYAASAHRAFRPAGDPLRPAFDLKGGSIPYAGRVFTEDEVEAAVSSTLDFWLTLGNEGEAF
QKELAGFLGVRACLAVNSGSSANLLALSALTSHLLPASKRLQPGDEVITCAAGFPTTVTPIFQNGCIPVFIDNDPLTGNL
KVDQLEAAFVPGRTKAVMAAHALGNPFDLGGVLSFCRQHDLWLIEDNCDALGCSYTMPREQAEELGFDQNSPGLDAGDAH
VIRWTGTWGDISTQSFYPPHHLTMGEGGAVNIVESSLLRRIVESFRDWGRDCWCPSGRDDTCSKRYDWQLGELPKGYDHK
YIYSHFGYNLKPLDPQAAIGRIQIRRLPDFIEMRKCNWQRLRQGLDHLSDVFNFCLPTHATRFESSSGSFAWDSSGASTD
CSWFGFLLLVRPEAPFTSSELGRHLADNGVGTRMLFGGNLLKQPAFVQLRKDRPDAMRLAMPEMPGADQLMQEALFLGTY
PGLSEEMIDRELALISAFVEEKKYNISQPNTAIS

Sequences:

>Translated_514_residues
MASPAELEALKAEILALTRRYAASAHRAFRPAGDPLRPAFDLKGGSIPYAGRVFTEDEVEAAVSSTLDFWLTLGNEGEAF
QKELAGFLGVRACLAVNSGSSANLLALSALTSHLLPASKRLQPGDEVITCAAGFPTTVTPIFQNGCIPVFIDNDPLTGNL
KVDQLEAAFVPGRTKAVMAAHALGNPFDLGGVLSFCRQHDLWLIEDNCDALGCSYTMPREQAEELGFDQNSPGLDAGDAH
VIRWTGTWGDISTQSFYPPHHLTMGEGGAVNIVESSLLRRIVESFRDWGRDCWCPSGRDDTCSKRYDWQLGELPKGYDHK
YIYSHFGYNLKPLDPQAAIGRIQIRRLPDFIEMRKCNWQRLRQGLDHLSDVFNFCLPTHATRFESSSGSFAWDSSGASTD
CSWFGFLLLVRPEAPFTSSELGRHLADNGVGTRMLFGGNLLKQPAFVQLRKDRPDAMRLAMPEMPGADQLMQEALFLGTY
PGLSEEMIDRELALISAFVEEKKYNISQPNTAIS
>Mature_513_residues
ASPAELEALKAEILALTRRYAASAHRAFRPAGDPLRPAFDLKGGSIPYAGRVFTEDEVEAAVSSTLDFWLTLGNEGEAFQ
KELAGFLGVRACLAVNSGSSANLLALSALTSHLLPASKRLQPGDEVITCAAGFPTTVTPIFQNGCIPVFIDNDPLTGNLK
VDQLEAAFVPGRTKAVMAAHALGNPFDLGGVLSFCRQHDLWLIEDNCDALGCSYTMPREQAEELGFDQNSPGLDAGDAHV
IRWTGTWGDISTQSFYPPHHLTMGEGGAVNIVESSLLRRIVESFRDWGRDCWCPSGRDDTCSKRYDWQLGELPKGYDHKY
IYSHFGYNLKPLDPQAAIGRIQIRRLPDFIEMRKCNWQRLRQGLDHLSDVFNFCLPTHATRFESSSGSFAWDSSGASTDC
SWFGFLLLVRPEAPFTSSELGRHLADNGVGTRMLFGGNLLKQPAFVQLRKDRPDAMRLAMPEMPGADQLMQEALFLGTYP
GLSEEMIDRELALISAFVEEKKYNISQPNTAIS

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=297, Percent_Identity=24.9158249158249, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 56593; Mature: 56461

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPAELEALKAEILALTRRYAASAHRAFRPAGDPLRPAFDLKGGSIPYAGRVFTEDEVE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHH
AAVSSTLDFWLTLGNEGEAFQKELAGFLGVRACLAVNSGSSANLLALSALTSHLLPASKR
HHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCHHC
LQPGDEVITCAAGFPTTVTPIFQNGCIPVFIDNDPLTGNLKVDQLEAAFVPGRTKAVMAA
CCCCCCEEEEECCCCCCCCHHHHCCCEEEEECCCCCCCCEEHHCCCEEECCCCHHHHHHH
HALGNPFDLGGVLSFCRQHDLWLIEDNCDALGCSYTMPREQAEELGFDQNSPGLDAGDAH
HHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCE
VIRWTGTWGDISTQSFYPPHHLTMGEGGAVNIVESSLLRRIVESFRDWGRDCWCPSGRDD
EEEEECCCCCCCCCCCCCCCCEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TCSKRYDWQLGELPKGYDHKYIYSHFGYNLKPLDPQAAIGRIQIRRLPDFIEMRKCNWQR
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCEEEHHCCHHHHHHCCCHHH
LRQGLDHLSDVFNFCLPTHATRFESSSGSFAWDSSGASTDCSWFGFLLLVRPEAPFTSSE
HHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCCCCHHEEEEEEEECCCCCCCHHH
LGRHLADNGVGTRMLFGGNLLKQPAFVQLRKDRPDAMRLAMPEMPGADQLMQEALFLGTY
HHHHHHCCCCCEEEEECCCHHCCCCEEEEECCCCHHHHEECCCCCCHHHHHHHHHHHCCC
PGLSEEMIDRELALISAFVEEKKYNISQPNTAIS
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ASPAELEALKAEILALTRRYAASAHRAFRPAGDPLRPAFDLKGGSIPYAGRVFTEDEVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHH
AAVSSTLDFWLTLGNEGEAFQKELAGFLGVRACLAVNSGSSANLLALSALTSHLLPASKR
HHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCHHC
LQPGDEVITCAAGFPTTVTPIFQNGCIPVFIDNDPLTGNLKVDQLEAAFVPGRTKAVMAA
CCCCCCEEEEECCCCCCCCHHHHCCCEEEEECCCCCCCCEEHHCCCEEECCCCHHHHHHH
HALGNPFDLGGVLSFCRQHDLWLIEDNCDALGCSYTMPREQAEELGFDQNSPGLDAGDAH
HHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCE
VIRWTGTWGDISTQSFYPPHHLTMGEGGAVNIVESSLLRRIVESFRDWGRDCWCPSGRDD
EEEEECCCCCCCCCCCCCCCCEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TCSKRYDWQLGELPKGYDHKYIYSHFGYNLKPLDPQAAIGRIQIRRLPDFIEMRKCNWQR
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCEEEHHCCHHHHHHCCCHHH
LRQGLDHLSDVFNFCLPTHATRFESSSGSFAWDSSGASTDCSWFGFLLLVRPEAPFTSSE
HHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCCCCHHEEEEEEEECCCCCCCHHH
LGRHLADNGVGTRMLFGGNLLKQPAFVQLRKDRPDAMRLAMPEMPGADQLMQEALFLGTY
HHHHHHCCCCCEEEEECCCHHCCCCEEEEECCCCHHHHEECCCCCCHHHHHHHHHHHCCC
PGLSEEMIDRELALISAFVEEKKYNISQPNTAIS
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]