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The map label for this gene is rfbG [H]

Identifier: 124021853

GI number: 124021853

Start: 153676

End: 154773

Strand: Direct

Name: rfbG [H]

Synonym: P9303_01401

Alternate gene names: 124021853

Gene position: 153676-154773 (Clockwise)

Preceding gene: 124021852

Following gene: 124021854

Centisome position: 5.73

GC content: 54.46

Gene sequence:

>1098_bases
ATGGAAAACATGGTGATGGCTGAGAGCTGGAATCCAGATTTTTGGTGTGGCAGGCGCGTCTGGCTCAGTGGCCACACAGG
CTTTAAAGGCAGCTGGTTGGCTCTTTGGTTGCTGCATTGGGGAGCAGTTGTGGAAGGCTATGCCCTTGATCCAGACCAGG
CTGGTGGACCCTCCTTATTCGACAGCCTTGAGATCGCGGCCGATCTGTCACGTGATGAGCGCGCTGATTTGGCGCAGGCT
GATCATCTAGTCACGCGGCTGCGCGCCTTTCAGCCCGAGGTGGTGTTTCATCTTGCTGCCCAGCCGCTTGTGACCAGAAG
TTACCGAGAACCTTTGCAGACGTGGAATACCAACGTGATTGGTACCTGCCATGTGCTCGAGGCTTTGCGACAATTGGATC
ATCCCTGTGTGTCGGTGATGATCACCACCGACAAGGTCTACGACAATCAAGAGTGGGAGTATGGCTATCGGGAGAATGAT
CCCCTCGGAGGTCATGATCCTTACAGCAGTAGTAAGGCAGCAGCAGAACTTGCGATTGCGAGTTGGCGAGCAAGTTTTTG
TGGTCTCTTGCCCCATCAAGTGCCAAATTTGAAGCTGGTTTCAGCGCGTGCAGGCAATGTGATTGGCGGTGGCGATTGGG
CTGAAAATCGCATTGTTCCTGATGCCATACGTGCTCTGATCAAGGCAGAGCCAATTGTCGTGCGTGCGCCTGAATCGACA
AGGCCGTGGCAGCATGTGCTTGAGCCTCTGGGTGGCTATCTCGCCTTGGCTGAGCAGCTGCACGAGAATCCCAATCTTGC
GACCGCCTTCAATTTTGGTCCACAACGAAGCGCCAACCGGCCAGTGGCAGCCCTTGTCGAAGAAATCCTCAGCCATTGGC
CTGGATCATGGCTTGATCAATCCGATCCCAAGGCCAAACATGAAGCTGGTCGCCTAGATCTAACCACCGATCGAGCATTC
CATCAGCTTGGTTGGAGCCCTCGTTGGAGTTTTGAGGTCACGATTGCGGAAACGGTGAATTGGTATCGCCGCTTTCATGC
TGGAGAAGATGCGCGCCAATTGTGCCTTGAACAGATCGATCGCTACGTGAAGGGCTGA

Upstream 100 bases:

>100_bases
ACCAACTCAATGCATTTCAGCACCATGGCTTCTGGCAACCCATGGATACCCTGCGCGATCGTCAGCTGCTTGAAGAACTC
TGGAAGGATGATCGCGCCCC

Downstream 100 bases:

>100_bases
TAATTTGCCCTTAGTAATGGTTGCTGTTGTTGTCTGTTCCAATTAGCGCTGAATCAATGGCGAGTCCAGCAGAACTCGAA
GCGCTTAAAGCTGAAATCCT

Product: CDP-glucose 4,6-dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MENMVMAESWNPDFWCGRRVWLSGHTGFKGSWLALWLLHWGAVVEGYALDPDQAGGPSLFDSLEIAADLSRDERADLAQA
DHLVTRLRAFQPEVVFHLAAQPLVTRSYREPLQTWNTNVIGTCHVLEALRQLDHPCVSVMITTDKVYDNQEWEYGYREND
PLGGHDPYSSSKAAAELAIASWRASFCGLLPHQVPNLKLVSARAGNVIGGGDWAENRIVPDAIRALIKAEPIVVRAPEST
RPWQHVLEPLGGYLALAEQLHENPNLATAFNFGPQRSANRPVAALVEEILSHWPGSWLDQSDPKAKHEAGRLDLTTDRAF
HQLGWSPRWSFEVTIAETVNWYRRFHAGEDARQLCLEQIDRYVKG

Sequences:

>Translated_365_residues
MENMVMAESWNPDFWCGRRVWLSGHTGFKGSWLALWLLHWGAVVEGYALDPDQAGGPSLFDSLEIAADLSRDERADLAQA
DHLVTRLRAFQPEVVFHLAAQPLVTRSYREPLQTWNTNVIGTCHVLEALRQLDHPCVSVMITTDKVYDNQEWEYGYREND
PLGGHDPYSSSKAAAELAIASWRASFCGLLPHQVPNLKLVSARAGNVIGGGDWAENRIVPDAIRALIKAEPIVVRAPEST
RPWQHVLEPLGGYLALAEQLHENPNLATAFNFGPQRSANRPVAALVEEILSHWPGSWLDQSDPKAKHEAGRLDLTTDRAF
HQLGWSPRWSFEVTIAETVNWYRRFHAGEDARQLCLEQIDRYVKG
>Mature_365_residues
MENMVMAESWNPDFWCGRRVWLSGHTGFKGSWLALWLLHWGAVVEGYALDPDQAGGPSLFDSLEIAADLSRDERADLAQA
DHLVTRLRAFQPEVVFHLAAQPLVTRSYREPLQTWNTNVIGTCHVLEALRQLDHPCVSVMITTDKVYDNQEWEYGYREND
PLGGHDPYSSSKAAAELAIASWRASFCGLLPHQVPNLKLVSARAGNVIGGGDWAENRIVPDAIRALIKAEPIVVRAPEST
RPWQHVLEPLGGYLALAEQLHENPNLATAFNFGPQRSANRPVAALVEEILSHWPGSWLDQSDPKAKHEAGRLDLTTDRAF
HQLGWSPRWSFEVTIAETVNWYRRFHAGEDARQLCLEQIDRYVKG

Specific function: DTDP-L-RHAMNOSE BIOSYNTHESIS WITHIN THE O ANTIGEN BIOSYNTHESIS PATHWAY OF LIPOPOLYSACCHARIDE BIOSYNTHESIS. [C]

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7657641, Length=345, Percent_Identity=24.0579710144928, Blast_Score=72, Evalue=5e-13,
Organism=Escherichia coli, GI48994969, Length=346, Percent_Identity=25.7225433526012, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI115532424, Length=276, Percent_Identity=26.0869565217391, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013445
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =4.2.1.45 [H]

Molecular weight: Translated: 41039; Mature: 41039

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENMVMAESWNPDFWCGRRVWLSGHTGFKGSWLALWLLHWGAVVEGYALDPDQAGGPSLF
CCCCEEECCCCCCCEECCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
DSLEIAADLSRDERADLAQADHLVTRLRAFQPEVVFHLAAQPLVTRSYREPLQTWNTNVI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCC
GTCHVLEALRQLDHPCVSVMITTDKVYDNQEWEYGYRENDPLGGHDPYSSSKAAAELAIA
HHHHHHHHHHHCCCCEEEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
SWRASFCGLLPHQVPNLKLVSARAGNVIGGGDWAENRIVPDAIRALIKAEPIVVRAPEST
HHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCC
RPWQHVLEPLGGYLALAEQLHENPNLATAFNFGPQRSANRPVAALVEEILSHWPGSWLDQ
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
SDPKAKHEAGRLDLTTDRAFHQLGWSPRWSFEVTIAETVNWYRRFHAGEDARQLCLEQID
CCCCHHHHCCCEEECHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHH
RYVKG
HHHCC
>Mature Secondary Structure
MENMVMAESWNPDFWCGRRVWLSGHTGFKGSWLALWLLHWGAVVEGYALDPDQAGGPSLF
CCCCEEECCCCCCCEECCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
DSLEIAADLSRDERADLAQADHLVTRLRAFQPEVVFHLAAQPLVTRSYREPLQTWNTNVI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCC
GTCHVLEALRQLDHPCVSVMITTDKVYDNQEWEYGYRENDPLGGHDPYSSSKAAAELAIA
HHHHHHHHHHHCCCCEEEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
SWRASFCGLLPHQVPNLKLVSARAGNVIGGGDWAENRIVPDAIRALIKAEPIVVRAPEST
HHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCC
RPWQHVLEPLGGYLALAEQLHENPNLATAFNFGPQRSANRPVAALVEEILSHWPGSWLDQ
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
SDPKAKHEAGRLDLTTDRAFHQLGWSPRWSFEVTIAETVNWYRRFHAGEDARQLCLEQID
CCCCHHHHCCCEEECHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHH
RYVKG
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]