| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021835
Identifier: 124021835
GI number: 124021835
Start: 125559
End: 127058
Strand: Reverse
Name: 124021835
Synonym: P9303_01221
Alternate gene names: NA
Gene position: 127058-125559 (Counterclockwise)
Preceding gene: 124021836
Following gene: 124021834
Centisome position: 4.74
GC content: 28.8
Gene sequence:
>1500_bases TTGGTCTCCAGAAGTGATCAAAAAATTTATAGTTTGATGTTAAATAAAAAATTTAGCAAAAAATTGCTAATAAAAACAGA TCATCAATTGATGACGTTTTACAAATATATTGAGAAGTTATTTCTCAATATATTTGTAAAATACGCAATAATAGCACCAT TGCCATATGCAATAGGTAATTTCTGTGAAGAAATTAAGCATGCAATAATGCTAGCATCAATTCATGATCAAAAACTTATA ATTTTAACACCACCAAACATATTCAGGAAGATATTTAAATATAAACCTTGCAATACACATCTTATTAATTTTAGTAATTG GTATTCAATTAAAGAAGTTGGAAGGTGGCGATTCTATTCTATTTATAGCATCTACATCATTATATTTATAGTAACAAGAG GGGCGTACTTATTGATAATAAATAAGTTGCTAAAAAACCACTATATCAACCATAAAATGGATTTCATAGGTATAAGTTGC TATTACTCATTTGCTCGGATTGGATTATCCAGAATTTGGTCTAAATTGTCAACATCAAATGTAAATATCTATAAAGAAAC ATCGTATGAAAAAAGAATAAACACATTTAAACAAGAACTGGTTCACTATTTAACTTCATTGAATGAATTTAAAAAATTGG AAACTAAAGTCAAAGATCTATGCATGAATAAACCAATAGTCGTTCATACAAGATCAGATAAACACTATGATGATGGGAAG TATTATGCTGATGGAAATCGGGAAAAGAATAGGAAAAACAGGAACATGGCTATAACAAATTATATTCCCTTATTGAATTA CTTGGCCAAGCATCATCAACATCCAATAGTAATTATTGGTGACCCAAATAATTTAGAGAGTTTACCAGAAGAAATAATTA ATCTGCCAGGATTAGTTAATTATTCAAATCAAAGACTTGTGGAATTGATGGTAATGTTAAATTGTCAATATTTTATAGGT ACACAGTCTGGTCCATGGGATCTAGCTTTATTATTAGATAAAGAGATGTTGGTGTTCAATTGTATCGATATAACTACAGC TTGTATTGACACAAAACCGTTCATAAGAAGTAAATACTTTATTAAACCAATTAAAGATGGTTTGAGCAGTGAAGAGTGGC TTAAAATTCAGCCATACGATCTAAATACTGAAAATGTTGGTGTTATGAATAAGTATTCACATGAATCAGAATTTTTAGTT TCTGTTATAAATAAAGTAATGAAGAATGAGGAAATGGATATATTTAATGAAAAACATAATTTGCATAGTAAGTTAGAGCC GCAAAAGGTAGCATCTAATCTGGAAATATTGCCTATAAGCAATGATACCGTGAATGTAATAAGATCGAAGTTATTGTGGA AATGGAAAACAAAAAGTCAGTCGGATCAATTATTTTCTAACTTGTTATATTATAAGGATGAATACAATCGCTTACTCATA AAAATAAATTTATCAATACAGAACAGTGCAAGCGTATATCTGGATGCAGATAAGAAATAG
Upstream 100 bases:
>100_bases AAGAATTTGGAAAATCAATAAAGCAAATAGAAGAAATCATTTTGATTATATTAAAAGCTGTAGAGAAGTATGCGGAACAC TCTGATAAAGGAATGGAGGA
Downstream 100 bases:
>100_bases TTGAATCCAGAATTTAAAATAAGGAATAGACTTATAGAATCACAAATTAAATTGTAATGAGGATATCTGTTCATAAATGT AGTGGGAGTACGAAGTGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MVSRSDQKIYSLMLNKKFSKKLLIKTDHQLMTFYKYIEKLFLNIFVKYAIIAPLPYAIGNFCEEIKHAIMLASIHDQKLI ILTPPNIFRKIFKYKPCNTHLINFSNWYSIKEVGRWRFYSIYSIYIIIFIVTRGAYLLIINKLLKNHYINHKMDFIGISC YYSFARIGLSRIWSKLSTSNVNIYKETSYEKRINTFKQELVHYLTSLNEFKKLETKVKDLCMNKPIVVHTRSDKHYDDGK YYADGNREKNRKNRNMAITNYIPLLNYLAKHHQHPIVIIGDPNNLESLPEEIINLPGLVNYSNQRLVELMVMLNCQYFIG TQSGPWDLALLLDKEMLVFNCIDITTACIDTKPFIRSKYFIKPIKDGLSSEEWLKIQPYDLNTENVGVMNKYSHESEFLV SVINKVMKNEEMDIFNEKHNLHSKLEPQKVASNLEILPISNDTVNVIRSKLLWKWKTKSQSDQLFSNLLYYKDEYNRLLI KINLSIQNSASVYLDADKK
Sequences:
>Translated_499_residues MVSRSDQKIYSLMLNKKFSKKLLIKTDHQLMTFYKYIEKLFLNIFVKYAIIAPLPYAIGNFCEEIKHAIMLASIHDQKLI ILTPPNIFRKIFKYKPCNTHLINFSNWYSIKEVGRWRFYSIYSIYIIIFIVTRGAYLLIINKLLKNHYINHKMDFIGISC YYSFARIGLSRIWSKLSTSNVNIYKETSYEKRINTFKQELVHYLTSLNEFKKLETKVKDLCMNKPIVVHTRSDKHYDDGK YYADGNREKNRKNRNMAITNYIPLLNYLAKHHQHPIVIIGDPNNLESLPEEIINLPGLVNYSNQRLVELMVMLNCQYFIG TQSGPWDLALLLDKEMLVFNCIDITTACIDTKPFIRSKYFIKPIKDGLSSEEWLKIQPYDLNTENVGVMNKYSHESEFLV SVINKVMKNEEMDIFNEKHNLHSKLEPQKVASNLEILPISNDTVNVIRSKLLWKWKTKSQSDQLFSNLLYYKDEYNRLLI KINLSIQNSASVYLDADKK >Mature_499_residues MVSRSDQKIYSLMLNKKFSKKLLIKTDHQLMTFYKYIEKLFLNIFVKYAIIAPLPYAIGNFCEEIKHAIMLASIHDQKLI ILTPPNIFRKIFKYKPCNTHLINFSNWYSIKEVGRWRFYSIYSIYIIIFIVTRGAYLLIINKLLKNHYINHKMDFIGISC YYSFARIGLSRIWSKLSTSNVNIYKETSYEKRINTFKQELVHYLTSLNEFKKLETKVKDLCMNKPIVVHTRSDKHYDDGK YYADGNREKNRKNRNMAITNYIPLLNYLAKHHQHPIVIIGDPNNLESLPEEIINLPGLVNYSNQRLVELMVMLNCQYFIG TQSGPWDLALLLDKEMLVFNCIDITTACIDTKPFIRSKYFIKPIKDGLSSEEWLKIQPYDLNTENVGVMNKYSHESEFLV SVINKVMKNEEMDIFNEKHNLHSKLEPQKVASNLEILPISNDTVNVIRSKLLWKWKTKSQSDQLFSNLLYYKDEYNRLLI KINLSIQNSASVYLDADKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58796; Mature: 58796
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRSDQKIYSLMLNKKFSKKLLIKTDHQLMTFYKYIEKLFLNIFVKYAIIAPLPYAIGN CCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FCEEIKHAIMLASIHDQKLIILTPPNIFRKIFKYKPCNTHLINFSNWYSIKEVGRWRFYS HHHHHHHHHHHEEECCCEEEEECCCHHHHHHHHCCCCCCEEEECCCCEEHHHHCCCHHHH IYSIYIIIFIVTRGAYLLIINKLLKNHYINHKMDFIGISCYYSFARIGLSRIWSKLSTSN HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC VNIYKETSYEKRINTFKQELVHYLTSLNEFKKLETKVKDLCMNKPIVVHTRSDKHYDDGK CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC YYADGNREKNRKNRNMAITNYIPLLNYLAKHHQHPIVIIGDPNNLESLPEEIINLPGLVN EEECCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEC YSNQRLVELMVMLNCQYFIGTQSGPWDLALLLDKEMLVFNCIDITTACIDTKPFIRSKYF CCHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCCCCEEEHHHHHHHHCCCCCHHHHHHH IKPIKDGLSSEEWLKIQPYDLNTENVGVMNKYSHESEFLVSVINKVMKNEEMDIFNEKHN HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH LHSKLEPQKVASNLEILPISNDTVNVIRSKLLWKWKTKSQSDQLFSNLLYYKDEYNRLLI HHHCCCHHHHHCCCEEEEECCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCEEEE KINLSIQNSASVYLDADKK EEEEEEECCCEEEEECCCC >Mature Secondary Structure MVSRSDQKIYSLMLNKKFSKKLLIKTDHQLMTFYKYIEKLFLNIFVKYAIIAPLPYAIGN CCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FCEEIKHAIMLASIHDQKLIILTPPNIFRKIFKYKPCNTHLINFSNWYSIKEVGRWRFYS HHHHHHHHHHHEEECCCEEEEECCCHHHHHHHHCCCCCCEEEECCCCEEHHHHCCCHHHH IYSIYIIIFIVTRGAYLLIINKLLKNHYINHKMDFIGISCYYSFARIGLSRIWSKLSTSN HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC VNIYKETSYEKRINTFKQELVHYLTSLNEFKKLETKVKDLCMNKPIVVHTRSDKHYDDGK CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC YYADGNREKNRKNRNMAITNYIPLLNYLAKHHQHPIVIIGDPNNLESLPEEIINLPGLVN EEECCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEC YSNQRLVELMVMLNCQYFIGTQSGPWDLALLLDKEMLVFNCIDITTACIDTKPFIRSKYF CCHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCCCCEEEHHHHHHHHCCCCCHHHHHHH IKPIKDGLSSEEWLKIQPYDLNTENVGVMNKYSHESEFLVSVINKVMKNEEMDIFNEKHN HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH LHSKLEPQKVASNLEILPISNDTVNVIRSKLLWKWKTKSQSDQLFSNLLYYKDEYNRLLI HHHCCCHHHHHCCCEEEEECCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCEEEE KINLSIQNSASVYLDADKK EEEEEEECCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA