| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021832
Identifier: 124021832
GI number: 124021832
Start: 119566
End: 121215
Strand: Reverse
Name: 124021832
Synonym: P9303_01191
Alternate gene names: NA
Gene position: 121215-119566 (Counterclockwise)
Preceding gene: 124021833
Following gene: 124021830
Centisome position: 4.52
GC content: 33.21
Gene sequence:
>1650_bases ATGACATGTAGGCGTATAATAAATGAAGTTTACAATAAGTTTATGAGGTTAACACTAAAAGAAACCCATAAAACAATCCA TATCAGCTACAGCCTAGATGGAGATTATAATAGTTATGAAATAAATCTGGATTGCATAGAAGAATCTTGCCCACAGATAC TTTATGCATGGTTGCTTATAAGTACAAAGAAGGTATTAGATAAATTACCATTTGACAAAATAGAATTTGACGTACAAAAG AGTTTATGTATTAATTATGATGGCGTGATTAGAACCTATGCAAGTGAACTAATGGGGACGAATGACTTTCTACAAAATAA TAGTAATCTTAAAGATATTGCAAAGAAATGGAAAAATCCACTTTTTATTAGAATCCGGGACCATCGATATGAAGCTTTCT ATAACTGGCTTAAAGATGAGATCCCATCCATTGATTACCTTTATCAAGAAATAGATTTCGACCCAGTAACAAGAGAGTGG GGGGAAGAAAGGGAAACAATCAAGCCACATCAATTAACAAAAAGAATATGTGATCACAAAATAGGAAGTATACTAACAAT TAATAGTTTCTTTTTAATGTATTTTGCAGGTGCATCAAATATAAATATGTGTGCTTTATTGACATTCATGGGAGTTGATA TGGTCATGATAAATAATGACCCAGCAGAGTTGACGTTATATGGTATATACGTAAGAGGGCAGTATCATCAGAAGATAAGA TTTAGCACAATGAGTATATTGGGTAGAAAATGGGATGATCAATTTAAACAGCCTGTAAGTTATATAACATCGCCCCACGA TTATAGATTAAATCATCAACCACAAATACAAGAAGACTACAAGGTAATCGTGATCTCTAATAGTAGGTGGGAGGGAGTAC AAGCGTGGAAAGAGCCAATTAAAATATTATTGGAGAACATGGAAAATCCATTAAGTGAGCTACCACTTTGGTACATGGCA ACACATAAATTGCTGGAAAATTCAGATCTAACTTGCGTTAATAAAGGAAGGTTGATGACTAGCATACATACATTGTTCTA TAATGCAGCACAATGGATGAAATATAAAATAATAGAGAACATAAAGACATCTCGTGTGATTGAGGTTTACGGAGACGTGG GATGGAGGAATATATGTGATAAATATTACAAAGGTTGTCTGACTGCTGAGCAGGTAGATGAAGCCTATGAAAATAATAAT GTGCTAATTCTACTTTTAAATTTTGGTTTTACATATTTAGATCACAGTGGTCCAATGTATGACATGATCGCAAAAAAAAC ATACTGGATTAATGTACCTCCAATTGTTAAAACAAAAGAATTGTCGGGTTTGGAAAATATTGAATATACTAGTTACGATA GGCTAAATATACTCATCGATGATGTTAGGCCATATATGAAAAAATCCATGGAATCGATAGATAAGTTGCATTCACTTTAT CATTCAAACACAAGCAATCTTGTCAACCAGATTAAAAGAAGAGCCTGGAATTGTCAGGACGATGATGAATTCGAAAATTC CTTAGTTGAGCATAGAATGGATATGAACTCGTTACTAGATAGTTATATAGATAAGAATGAACCCTGTTTAAGAATTTTGG CTGAACAAGTTTGCAAGTTTCTTGAACGGGGAAAAGCCTTTTCTTTTTAA
Upstream 100 bases:
>100_bases ATAAAGGTAATGTGAAACATGCGAATGATAATTGTGATGCTTGAGTCATGGAATTGTAAAATGGGAAAAAAGATAAGCTT TATGCGATAAACTAATAGAT
Downstream 100 bases:
>100_bases TCTGACTTTAGCAAAACAAGCTAAAGCATAAGTACTTAGAAAATATCATGTAATGATTTTCATAACTATCAGCGAAGCAG GCCAAAATAGAATGAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 549; Mature: 548
Protein sequence:
>549_residues MTCRRIINEVYNKFMRLTLKETHKTIHISYSLDGDYNSYEINLDCIEESCPQILYAWLLISTKKVLDKLPFDKIEFDVQK SLCINYDGVIRTYASELMGTNDFLQNNSNLKDIAKKWKNPLFIRIRDHRYEAFYNWLKDEIPSIDYLYQEIDFDPVTREW GEERETIKPHQLTKRICDHKIGSILTINSFFLMYFAGASNINMCALLTFMGVDMVMINNDPAELTLYGIYVRGQYHQKIR FSTMSILGRKWDDQFKQPVSYITSPHDYRLNHQPQIQEDYKVIVISNSRWEGVQAWKEPIKILLENMENPLSELPLWYMA THKLLENSDLTCVNKGRLMTSIHTLFYNAAQWMKYKIIENIKTSRVIEVYGDVGWRNICDKYYKGCLTAEQVDEAYENNN VLILLLNFGFTYLDHSGPMYDMIAKKTYWINVPPIVKTKELSGLENIEYTSYDRLNILIDDVRPYMKKSMESIDKLHSLY HSNTSNLVNQIKRRAWNCQDDDEFENSLVEHRMDMNSLLDSYIDKNEPCLRILAEQVCKFLERGKAFSF
Sequences:
>Translated_549_residues MTCRRIINEVYNKFMRLTLKETHKTIHISYSLDGDYNSYEINLDCIEESCPQILYAWLLISTKKVLDKLPFDKIEFDVQK SLCINYDGVIRTYASELMGTNDFLQNNSNLKDIAKKWKNPLFIRIRDHRYEAFYNWLKDEIPSIDYLYQEIDFDPVTREW GEERETIKPHQLTKRICDHKIGSILTINSFFLMYFAGASNINMCALLTFMGVDMVMINNDPAELTLYGIYVRGQYHQKIR FSTMSILGRKWDDQFKQPVSYITSPHDYRLNHQPQIQEDYKVIVISNSRWEGVQAWKEPIKILLENMENPLSELPLWYMA THKLLENSDLTCVNKGRLMTSIHTLFYNAAQWMKYKIIENIKTSRVIEVYGDVGWRNICDKYYKGCLTAEQVDEAYENNN VLILLLNFGFTYLDHSGPMYDMIAKKTYWINVPPIVKTKELSGLENIEYTSYDRLNILIDDVRPYMKKSMESIDKLHSLY HSNTSNLVNQIKRRAWNCQDDDEFENSLVEHRMDMNSLLDSYIDKNEPCLRILAEQVCKFLERGKAFSF >Mature_548_residues TCRRIINEVYNKFMRLTLKETHKTIHISYSLDGDYNSYEINLDCIEESCPQILYAWLLISTKKVLDKLPFDKIEFDVQKS LCINYDGVIRTYASELMGTNDFLQNNSNLKDIAKKWKNPLFIRIRDHRYEAFYNWLKDEIPSIDYLYQEIDFDPVTREWG EERETIKPHQLTKRICDHKIGSILTINSFFLMYFAGASNINMCALLTFMGVDMVMINNDPAELTLYGIYVRGQYHQKIRF STMSILGRKWDDQFKQPVSYITSPHDYRLNHQPQIQEDYKVIVISNSRWEGVQAWKEPIKILLENMENPLSELPLWYMAT HKLLENSDLTCVNKGRLMTSIHTLFYNAAQWMKYKIIENIKTSRVIEVYGDVGWRNICDKYYKGCLTAEQVDEAYENNNV LILLLNFGFTYLDHSGPMYDMIAKKTYWINVPPIVKTKELSGLENIEYTSYDRLNILIDDVRPYMKKSMESIDKLHSLYH SNTSNLVNQIKRRAWNCQDDDEFENSLVEHRMDMNSLLDSYIDKNEPCLRILAEQVCKFLERGKAFSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64904; Mature: 64773
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCRRIINEVYNKFMRLTLKETHKTIHISYSLDGDYNSYEINLDCIEESCPQILYAWLLI CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHH STKKVLDKLPFDKIEFDVQKSLCINYDGVIRTYASELMGTNDFLQNNSNLKDIAKKWKNP HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHCCCC LFIRIRDHRYEAFYNWLKDEIPSIDYLYQEIDFDPVTREWGEERETIKPHQLTKRICDHK EEEEEECCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHH IGSILTINSFFLMYFAGASNINMCALLTFMGVDMVMINNDPAELTLYGIYVRGQYHQKIR CCCEEEHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEEEEEECCHHHHHH FSTMSILGRKWDDQFKQPVSYITSPHDYRLNHQPQIQEDYKVIVISNSRWEGVQAWKEPI HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHH KILLENMENPLSELPLWYMATHKLLENSDLTCVNKGRLMTSIHTLFYNAAQWMKYKIIEN HHHHHHHCCHHHHCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHC IKTSRVIEVYGDVGWRNICDKYYKGCLTAEQVDEAYENNNVLILLLNFGFTYLDHSGPMY CCHHHEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCCEECCCCCHH DMIAKKTYWINVPPIVKTKELSGLENIEYTSYDRLNILIDDVRPYMKKSMESIDKLHSLY HHHHCCEEEEECCCCEECHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HSNTSNLVNQIKRRAWNCQDDDEFENSLVEHRMDMNSLLDSYIDKNEPCLRILAEQVCKF HCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LERGKAFSF HHCCCCCCC >Mature Secondary Structure TCRRIINEVYNKFMRLTLKETHKTIHISYSLDGDYNSYEINLDCIEESCPQILYAWLLI CHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHH STKKVLDKLPFDKIEFDVQKSLCINYDGVIRTYASELMGTNDFLQNNSNLKDIAKKWKNP HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHCCCC LFIRIRDHRYEAFYNWLKDEIPSIDYLYQEIDFDPVTREWGEERETIKPHQLTKRICDHK EEEEEECCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHH IGSILTINSFFLMYFAGASNINMCALLTFMGVDMVMINNDPAELTLYGIYVRGQYHQKIR CCCEEEHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEEEEEECCHHHHHH FSTMSILGRKWDDQFKQPVSYITSPHDYRLNHQPQIQEDYKVIVISNSRWEGVQAWKEPI HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHH KILLENMENPLSELPLWYMATHKLLENSDLTCVNKGRLMTSIHTLFYNAAQWMKYKIIEN HHHHHHHCCHHHHCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHC IKTSRVIEVYGDVGWRNICDKYYKGCLTAEQVDEAYENNNVLILLLNFGFTYLDHSGPMY CCHHHEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCCEECCCCCHH DMIAKKTYWINVPPIVKTKELSGLENIEYTSYDRLNILIDDVRPYMKKSMESIDKLHSLY HHHHCCEEEEECCCCEECHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HSNTSNLVNQIKRRAWNCQDDDEFENSLVEHRMDMNSLLDSYIDKNEPCLRILAEQVCKF HCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LERGKAFSF HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA