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The map label for this gene is 124021744

Identifier: 124021744

GI number: 124021744

Start: 33036

End: 34289

Strand: Reverse

Name: 124021744

Synonym: P9303_00291

Alternate gene names: NA

Gene position: 34289-33036 (Counterclockwise)

Preceding gene: 124021747

Following gene: 124021743

Centisome position: 1.28

GC content: 49.76

Gene sequence:

>1254_bases
ATGCTGAACCCTTACCCGGTTTCACATGCAAAAACTCGACTACACGCCACACAGAACCGTCTAATTCAATCGAGGTGCCA
GTGCGGAAGTCGTTACTTGAGATCATTCCCGCTGAACGGATCAGAGGGATCATACGGCTGTGCCAAAGTCCCAGCACAAG
AAGAGTTCCACATGCCAAATACTCCTCTACTGACCAGCCTGGTCACAGTGCTCGCAGTACTTTTACTCAATTGGGGTGAT
CCTGTTCTGGCTGCTCTGCCAGCTGGAAGTGCAGTGACGGATGGTGCCGCAATCCTGCGAAATGCGCTACCAATCGAACA
AAAAGATCTCCGCCAAATGCAAGCCACCCTTGAAGCCACTAGCAAAGTGGTTGGCTCTTCAAAGGGCAATCGCTGGGTTG
CCCTAAACGAAGCTGCTTCTTCTAGTCAGTTCCTAGTAATAACCCGCAAAAAGAGCATCCTCGCAGCCATCCCAGAAGCA
TCTCGAGAAGAGGGTGAGGCCCTTTTGGAATCCTTGGGAGAAACGCTCCAGGCCCTGGGGGATGAAGCAAGTAACCAAAA
CATAGATAACTTCATCGACCTACGTCGCAAAAGTCTCAAGCAGATCGGTGATCTAGAAGCGCTATTGGTGAATGATTTTC
CTTACACCATCCCTGAGGAATTCAACTCACTACCGCGGCTTCTTGGAAGAGCAACTGTATCGATCAAAACCACAAAAGGG
AATATCACTGCTGTCGTTGATGGTTACAACGCCCCGCTAACAGCCGGTGCCTTCGTAGACCTAGCTCTCAAAGGCTTTTA
TGACGGATTGCCATTCACACGCGCTGAAGACAATTACGTACTACAAAGCGGTGACCCCACAGGACCTGAAAGCGGATACA
TCGACCCAACAACCAAGAAAGAACGTCAAGTGCCTCTGGAAATCCGTATTCCAGAGGAAGCAACTCCTTTTTATAACCAA
ACCTTTGAAGACATCGGTCTTTACAAAGCGACACCAGTCCTCCCATTCGCCGCCCTTGGCACACTCGGATGGGCCCATTC
CGACCAGGCTATAGAAGACGGTTCCTCCCAGTTCTTTCTATTTCTTTATGATGCAGAATTAACTCCAGCGGGTCTCAACT
TGGTGGATGGCCGCAATGCAGCCTTTGGCTATGTCGTTGAAGGTACCGAGTTACTTAAAAAACTCGAAGTTGGTGATCAA
ATCTTATCCATCAAAGTTGTCGATGGAGCCGATCGGCTGAAGCCCCACGCCTGA

Upstream 100 bases:

>100_bases
GTCGACTTCTCAAGCAAGGCCTGCGGAAGCATCTCCCCAGCCCTAAAGGTTTTTTCCACCACGCTGCCGCTCTGCACCGC
CTTCAACTTGGTACGCACAA

Downstream 100 bases:

>100_bases
GGACTTGTGTATGGGCGAAACCCTGGGCCAACTGGGTGAAAACGAACTACTGCATCGACTAGCCCGCTTTGCTCCTGCTG
GCCAACTTGACGACGACACA

Product: cyclophilin-type peptidyl-prolyl cis-trans isomerase

Products: NA

Alternate protein names: Putative thylakoid lumen PPIase; Putative thylakoid lumen rotamase [H]

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MLNPYPVSHAKTRLHATQNRLIQSRCQCGSRYLRSFPLNGSEGSYGCAKVPAQEEFHMPNTPLLTSLVTVLAVLLLNWGD
PVLAALPAGSAVTDGAAILRNALPIEQKDLRQMQATLEATSKVVGSSKGNRWVALNEAASSSQFLVITRKKSILAAIPEA
SREEGEALLESLGETLQALGDEASNQNIDNFIDLRRKSLKQIGDLEALLVNDFPYTIPEEFNSLPRLLGRATVSIKTTKG
NITAVVDGYNAPLTAGAFVDLALKGFYDGLPFTRAEDNYVLQSGDPTGPESGYIDPTTKKERQVPLEIRIPEEATPFYNQ
TFEDIGLYKATPVLPFAALGTLGWAHSDQAIEDGSSQFFLFLYDAELTPAGLNLVDGRNAAFGYVVEGTELLKKLEVGDQ
ILSIKVVDGADRLKPHA

Sequences:

>Translated_417_residues
MLNPYPVSHAKTRLHATQNRLIQSRCQCGSRYLRSFPLNGSEGSYGCAKVPAQEEFHMPNTPLLTSLVTVLAVLLLNWGD
PVLAALPAGSAVTDGAAILRNALPIEQKDLRQMQATLEATSKVVGSSKGNRWVALNEAASSSQFLVITRKKSILAAIPEA
SREEGEALLESLGETLQALGDEASNQNIDNFIDLRRKSLKQIGDLEALLVNDFPYTIPEEFNSLPRLLGRATVSIKTTKG
NITAVVDGYNAPLTAGAFVDLALKGFYDGLPFTRAEDNYVLQSGDPTGPESGYIDPTTKKERQVPLEIRIPEEATPFYNQ
TFEDIGLYKATPVLPFAALGTLGWAHSDQAIEDGSSQFFLFLYDAELTPAGLNLVDGRNAAFGYVVEGTELLKKLEVGDQ
ILSIKVVDGADRLKPHA
>Mature_417_residues
MLNPYPVSHAKTRLHATQNRLIQSRCQCGSRYLRSFPLNGSEGSYGCAKVPAQEEFHMPNTPLLTSLVTVLAVLLLNWGD
PVLAALPAGSAVTDGAAILRNALPIEQKDLRQMQATLEATSKVVGSSKGNRWVALNEAASSSQFLVITRKKSILAAIPEA
SREEGEALLESLGETLQALGDEASNQNIDNFIDLRRKSLKQIGDLEALLVNDFPYTIPEEFNSLPRLLGRATVSIKTTKG
NITAVVDGYNAPLTAGAFVDLALKGFYDGLPFTRAEDNYVLQSGDPTGPESGYIDPTTKKERQVPLEIRIPEEATPFYNQ
TFEDIGLYKATPVLPFAALGTLGWAHSDQAIEDGSSQFFLFLYDAELTPAGLNLVDGRNAAFGYVVEGTELLKKLEVGDQ
ILSIKVVDGADRLKPHA

Specific function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Required for the assembly and stabilization of PSII [H]

COG id: COG0652

COG function: function code O; Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family

Gene ontology:

Cell location: Cellular thylakoid lumen (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase cyclophilin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015891
- InterPro:   IPR002130
- InterPro:   IPR023222 [H]

Pfam domain/function: PF00160 Pro_isomerase [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 45204; Mature: 45204

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS50072 CSA_PPIASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNPYPVSHAKTRLHATQNRLIQSRCQCGSRYLRSFPLNGSEGSYGCAKVPAQEEFHMPN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCC
TPLLTSLVTVLAVLLLNWGDPVLAALPAGSAVTDGAAILRNALPIEQKDLRQMQATLEAT
CHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHH
SKVVGSSKGNRWVALNEAASSSQFLVITRKKSILAAIPEASREEGEALLESLGETLQALG
HHHHCCCCCCEEEEEECCCCCCEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
DEASNQNIDNFIDLRRKSLKQIGDLEALLVNDFPYTIPEEFNSLPRLLGRATVSIKTTKG
CCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEEEECC
NITAVVDGYNAPLTAGAFVDLALKGFYDGLPFTRAEDNYVLQSGDPTGPESGYIDPTTKK
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
ERQVPLEIRIPEEATPFYNQTFEDIGLYKATPVLPFAALGTLGWAHSDQAIEDGSSQFFL
CCCCCEEEECCCCCCCHHHCCHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCEEEE
FLYDAELTPAGLNLVDGRNAAFGYVVEGTELLKKLEVGDQILSIKVVDGADRLKPHA
EEEECCCCCCCCEEECCCCCCEEEEECHHHHHHHHHCCCEEEEEEEECCHHHCCCCC
>Mature Secondary Structure
MLNPYPVSHAKTRLHATQNRLIQSRCQCGSRYLRSFPLNGSEGSYGCAKVPAQEEFHMPN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCC
TPLLTSLVTVLAVLLLNWGDPVLAALPAGSAVTDGAAILRNALPIEQKDLRQMQATLEAT
CHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHH
SKVVGSSKGNRWVALNEAASSSQFLVITRKKSILAAIPEASREEGEALLESLGETLQALG
HHHHCCCCCCEEEEEECCCCCCEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
DEASNQNIDNFIDLRRKSLKQIGDLEALLVNDFPYTIPEEFNSLPRLLGRATVSIKTTKG
CCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEEEECC
NITAVVDGYNAPLTAGAFVDLALKGFYDGLPFTRAEDNYVLQSGDPTGPESGYIDPTTKK
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
ERQVPLEIRIPEEATPFYNQTFEDIGLYKATPVLPFAALGTLGWAHSDQAIEDGSSQFFL
CCCCCEEEECCCCCCCHHHCCHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCEEEE
FLYDAELTPAGLNLVDGRNAAFGYVVEGTELLKKLEVGDQILSIKVVDGADRLKPHA
EEEECCCCCCCCEEECCCCCCEEEEECHHHHHHHHHCCCEEEEEEEECCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]