| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123969456
Identifier: 123969456
GI number: 123969456
Start: 1668036
End: 1668608
Strand: Direct
Name: 123969456
Synonym: A9601_19241
Alternate gene names: NA
Gene position: 1668036-1668608 (Clockwise)
Preceding gene: 123969455
Following gene: 123969457
Centisome position: 99.89
GC content: 27.57
Gene sequence:
>573_bases ATGAAGTTTAATAAATTTTTAAAATTAAAAATATTTTTTATTGTAGTAATTTCTCCATTATTTTTTAATATACCAAAAGC TTGTACTGCTGAAGAAATTAAAATCACTTATAGTATATTTTCGAGAACAATTAAAGTAAATTCTTTAAAAACTTTTGCTA AAGAAGGTAAATCTACAAAACAATTAAAAAGAATTTTAAAAGCAACCGGGTCTCCCGATAAAGAAATTAGAAAAGTTTTA AACAAAGAATTTGAAGTTCCTATTAGCATTGCAAGCAAACTAGTATATTCTGAAATAGGGAATGTTTTTTTAACAAGACT TTCATCTATTATCCACCCACCAAGAGCAACTGATGAAAGAACAGGCATGCTGGCCCTCAGAGCAAGCGTAATTCAAGGAA TTAACATAGGAAATGGAAAAATAAATCTAGTAAATTTTTTTGAAGGATATCCAACTAAAACTGTAATTTTAGATGTCAGC GCTTTGAGCAAAGTTATGAATAAAGTAGAATCGATTTCGGAATTATTAACCTTTTTCACCAATTCCCCTCTAGAAAAAAT CAAAACAAATTAA
Upstream 100 bases:
>100_bases TGAGCCCTATACAAAAGAAATGGGTATAAAAATAGCAAAAAAAGTAACTGAAAAAGGAGTAGTAAGACTTGTTAAGATTG CCGCTGGTGCAAATATATAA
Downstream 100 bases:
>100_bases ACAACCATGGTGTTATTAAATAAAATAAAAAATAAACTGCGTATTAATTACAGAAAAAAAAGATGGCCAGGTCTAATAGA AGCTTATAAACAATATCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKFNKFLKLKIFFIVVISPLFFNIPKACTAEEIKITYSIFSRTIKVNSLKTFAKEGKSTKQLKRILKATGSPDKEIRKVL NKEFEVPISIASKLVYSEIGNVFLTRLSSIIHPPRATDERTGMLALRASVIQGINIGNGKINLVNFFEGYPTKTVILDVS ALSKVMNKVESISELLTFFTNSPLEKIKTN
Sequences:
>Translated_190_residues MKFNKFLKLKIFFIVVISPLFFNIPKACTAEEIKITYSIFSRTIKVNSLKTFAKEGKSTKQLKRILKATGSPDKEIRKVL NKEFEVPISIASKLVYSEIGNVFLTRLSSIIHPPRATDERTGMLALRASVIQGINIGNGKINLVNFFEGYPTKTVILDVS ALSKVMNKVESISELLTFFTNSPLEKIKTN >Mature_190_residues MKFNKFLKLKIFFIVVISPLFFNIPKACTAEEIKITYSIFSRTIKVNSLKTFAKEGKSTKQLKRILKATGSPDKEIRKVL NKEFEVPISIASKLVYSEIGNVFLTRLSSIIHPPRATDERTGMLALRASVIQGINIGNGKINLVNFFEGYPTKTVILDVS ALSKVMNKVESISELLTFFTNSPLEKIKTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21348; Mature: 21348
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFNKFLKLKIFFIVVISPLFFNIPKACTAEEIKITYSIFSRTIKVNSLKTFAKEGKSTK CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QLKRILKATGSPDKEIRKVLNKEFEVPISIASKLVYSEIGNVFLTRLSSIIHPPRATDER HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH TGMLALRASVIQGINIGNGKINLVNFFEGYPTKTVILDVSALSKVMNKVESISELLTFFT HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH NSPLEKIKTN CCCHHHHCCC >Mature Secondary Structure MKFNKFLKLKIFFIVVISPLFFNIPKACTAEEIKITYSIFSRTIKVNSLKTFAKEGKSTK CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QLKRILKATGSPDKEIRKVLNKEFEVPISIASKLVYSEIGNVFLTRLSSIIHPPRATDER HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH TGMLALRASVIQGINIGNGKINLVNFFEGYPTKTVILDVSALSKVMNKVESISELLTFFT HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH NSPLEKIKTN CCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA