Click here to switch to the map view.

The map label for this gene is ynbB [H]

Identifier: 123969411

GI number: 123969411

Start: 1614634

End: 1615926

Strand: Reverse

Name: ynbB [H]

Synonym: A9601_18791

Alternate gene names: 123969411

Gene position: 1615926-1614634 (Counterclockwise)

Preceding gene: 123969412

Following gene: 123969410

Centisome position: 96.77

GC content: 33.18

Gene sequence:

>1293_bases
ATGACTCTTGACAATAACTTAAAACTGGCTGAACACACTGTTTTTTCTGTAGAAGAGAGTTTAAGTAAAGTTTTCCAAGA
AAGGTCCAATCAGGTTTTCCAGAAATTAGAAAATATTTTGACAATTTTTAAGGAAGAAAAAGTTTCTACTAGTCATTTCA
ATCAATCTTCTGGTAGTGGTCATGATGATATATCTAGAGAAAAAATTGATGCAGTTTTTGCAAGATTATTTCTTGCTGAA
AAGGCTGCTGTGAGGATGCAATTTGTGAGTGGAACCCATGCAATAAGTTCTGTCTTATTTGGAATTCTTCGACCCGGAGA
TGTAATGTTATCTCTTACAGGACAACCATATGACACGTTAGAAGAAGTCATAGGAATAAGGGGAGGAGGAAAAGGATCAC
TTAAAGATTTTGATATTGAATACAAGCAAGTAAATATCTGCGAGAATTTTGATTCTTTTGAAGAAAAAATTGTTCATTTT
TTTAAAGAAAATTCATGTAAATTAGTATTCATACAAAAAAGTTGTGGATATAGTTGGAGAAAGTCTCTTACGAATCATCA
GATAGAGAAAATTTGTAGTCTTATTCATTCTCTTGATACTAACTGCATATGTTTTGTTGATAACTGTTATGGTGAGCTTG
TTGAAGATAGTGAACCAATTTCTAAAGGGGCAAATATAATTGCTGGTTCATTGATTAAAAATTTGGGAGGAACAATAGTT
CCTACTGGTGGGTACGTTGCAGGAGATGCAGAGTTGGTTGAGATGGCATGTTCTAGATTAACCTCACCAGGCATTGGCTC
TTCTGCAGGAATAAATTTTGGATTAGGAAGATTAATTTTGCAGGGTTTGTTTTTAGCACCACAAATTGTTCATGAATCAC
TAAAAGGTGCTGATATGGTTGCAGCAGTCTTTAAGAATTTGGGATTTAAGGTTTTACCAGAGCCAGCAACTTATAGATCT
GATCTTATTCAGTCAGTAAGATTGAATAATCCTGATTTGGTACAAAAAATTTGTCAATCTTTTCAAAATTCTTCACCAGT
AGATTCTTTTCTAAATGTTGTTCCATCATCAATGGATGGATATGATTCAAAATTATTAATGGCAGGAGGTACCTTTATTG
AAGGTAGTACAAGTGAATTTTCTGCTGATGCCCCTCTAAGAGATCCTTATAATATTTTTGTTCAAGGTGGTTCTCACATA
GCTCACATCAAAATTGCATTAATTCGATTATTATCTGAACTATTAGAGGAAAAATTAATTTCAAAGGATTCTCTACTTCC
TTTATCTACTTAA

Upstream 100 bases:

>100_bases
TTCAAAAAAACTTTCTTATTTCCAGGGCAGGGGACCTAATGCTTTCCTAGCAGAATTAAGAAATTTAGCTTCTGAAAAAT
AACATGAATTTTTATAATAA

Downstream 100 bases:

>100_bases
TCATGTCTTACAAGTTTCCAGACAACCTCAACTATGCTGATACTCATGAATATGTCTTGGAAGAAAATGGATTATTAAAA
ATTGGAGTTAGTGAATTCGC

Product: cystathionine beta-lyase family aluminum resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MTLDNNLKLAEHTVFSVEESLSKVFQERSNQVFQKLENILTIFKEEKVSTSHFNQSSGSGHDDISREKIDAVFARLFLAE
KAAVRMQFVSGTHAISSVLFGILRPGDVMLSLTGQPYDTLEEVIGIRGGGKGSLKDFDIEYKQVNICENFDSFEEKIVHF
FKENSCKLVFIQKSCGYSWRKSLTNHQIEKICSLIHSLDTNCICFVDNCYGELVEDSEPISKGANIIAGSLIKNLGGTIV
PTGGYVAGDAELVEMACSRLTSPGIGSSAGINFGLGRLILQGLFLAPQIVHESLKGADMVAAVFKNLGFKVLPEPATYRS
DLIQSVRLNNPDLVQKICQSFQNSSPVDSFLNVVPSSMDGYDSKLLMAGGTFIEGSTSEFSADAPLRDPYNIFVQGGSHI
AHIKIALIRLLSELLEEKLISKDSLLPLST

Sequences:

>Translated_430_residues
MTLDNNLKLAEHTVFSVEESLSKVFQERSNQVFQKLENILTIFKEEKVSTSHFNQSSGSGHDDISREKIDAVFARLFLAE
KAAVRMQFVSGTHAISSVLFGILRPGDVMLSLTGQPYDTLEEVIGIRGGGKGSLKDFDIEYKQVNICENFDSFEEKIVHF
FKENSCKLVFIQKSCGYSWRKSLTNHQIEKICSLIHSLDTNCICFVDNCYGELVEDSEPISKGANIIAGSLIKNLGGTIV
PTGGYVAGDAELVEMACSRLTSPGIGSSAGINFGLGRLILQGLFLAPQIVHESLKGADMVAAVFKNLGFKVLPEPATYRS
DLIQSVRLNNPDLVQKICQSFQNSSPVDSFLNVVPSSMDGYDSKLLMAGGTFIEGSTSEFSADAPLRDPYNIFVQGGSHI
AHIKIALIRLLSELLEEKLISKDSLLPLST
>Mature_429_residues
TLDNNLKLAEHTVFSVEESLSKVFQERSNQVFQKLENILTIFKEEKVSTSHFNQSSGSGHDDISREKIDAVFARLFLAEK
AAVRMQFVSGTHAISSVLFGILRPGDVMLSLTGQPYDTLEEVIGIRGGGKGSLKDFDIEYKQVNICENFDSFEEKIVHFF
KENSCKLVFIQKSCGYSWRKSLTNHQIEKICSLIHSLDTNCICFVDNCYGELVEDSEPISKGANIIAGSLIKNLGGTIVP
TGGYVAGDAELVEMACSRLTSPGIGSSAGINFGLGRLILQGLFLAPQIVHESLKGADMVAAVFKNLGFKVLPEPATYRSD
LIQSVRLNNPDLVQKICQSFQNSSPVDSFLNVVPSSMDGYDSKLLMAGGTFIEGSTSEFSADAPLRDPYNIFVQGGSHIA
HIKIALIRLLSELLEEKLISKDSLLPLST

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 47064; Mature: 46933

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDNNLKLAEHTVFSVEESLSKVFQERSNQVFQKLENILTIFKEEKVSTSHFNQSSGSG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
HDDISREKIDAVFARLFLAEKAAVRMQFVSGTHAISSVLFGILRPGDVMLSLTGQPYDTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
EEVIGIRGGGKGSLKDFDIEYKQVNICENFDSFEEKIVHFFKENSCKLVFIQKSCGYSWR
HHHHCCCCCCCCCCCCCCCCHHEEHHHHCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
KSLTNHQIEKICSLIHSLDTNCICFVDNCYGELVEDSEPISKGANIIAGSLIKNLGGTIV
HHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCHHHCHHHHHHHHHHHCCCCEE
PTGGYVAGDAELVEMACSRLTSPGIGSSAGINFGLGRLILQGLFLAPQIVHESLKGADMV
CCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AAVFKNLGFKVLPEPATYRSDLIQSVRLNNPDLVQKICQSFQNSSPVDSFLNVVPSSMDG
HHHHHHCCCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC
YDSKLLMAGGTFIEGSTSEFSADAPLRDPYNIFVQGGSHIAHIKIALIRLLSELLEEKLI
CCCEEEEECCCEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
SKDSLLPLST
CCCCCCCCCC
>Mature Secondary Structure 
TLDNNLKLAEHTVFSVEESLSKVFQERSNQVFQKLENILTIFKEEKVSTSHFNQSSGSG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
HDDISREKIDAVFARLFLAEKAAVRMQFVSGTHAISSVLFGILRPGDVMLSLTGQPYDTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
EEVIGIRGGGKGSLKDFDIEYKQVNICENFDSFEEKIVHFFKENSCKLVFIQKSCGYSWR
HHHHCCCCCCCCCCCCCCCCHHEEHHHHCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
KSLTNHQIEKICSLIHSLDTNCICFVDNCYGELVEDSEPISKGANIIAGSLIKNLGGTIV
HHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCHHHCHHHHHHHHHHHCCCCEE
PTGGYVAGDAELVEMACSRLTSPGIGSSAGINFGLGRLILQGLFLAPQIVHESLKGADMV
CCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AAVFKNLGFKVLPEPATYRSDLIQSVRLNNPDLVQKICQSFQNSSPVDSFLNVVPSSMDG
HHHHHHCCCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC
YDSKLLMAGGTFIEGSTSEFSADAPLRDPYNIFVQGGSHIAHIKIALIRLLSELLEEKLI
CCCEEEEECCCEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
SKDSLLPLST
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]