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The map label for this gene is 123969404

Identifier: 123969404

GI number: 123969404

Start: 1607014

End: 1607571

Strand: Direct

Name: 123969404

Synonym: A9601_18721

Alternate gene names: NA

Gene position: 1607014-1607571 (Clockwise)

Preceding gene: 123969403

Following gene: 123969405

Centisome position: 96.23

GC content: 27.78

Gene sequence:

>558_bases
ATGGAAATATCTTCCTTTCAATCTTATTTAATAATTCTTTTTGTTGTATTAATAATAATTTCTATCTTTGTATTCAGACA
ATTTCTAAAAACCAGGAGTGAAGAATTAAATTTAGTCAAATTCGAGCAGAAAGGTTTAGATTCTCTCACTCAAGCTACAG
AATTATATGAATTTGGGTCTATTCAAATAAAAAAAAGATTATATCCTGAAGCTACTAAAACTTTTTTAAAAGCAATTGAA
AATTATGAAAATGAACCTGATGAAGCCAAAGCGATAATAAATAATGCTTTAGGATTTTCTTATGCTGCTCAAAATGAATT
TAAGAAAGCAATTAAACACTATAAATCTGCAATAAAATCACTTCCAGAATATCCTATAGCCCTAAATAACCTCGCATCAG
CACAACAGCGTTTACTTGAGTACGACTTGGCATATGAAACTTATCAAAAAGTTTTGGTGATAGATCCAAAAAACAAAACA
GCAATAAAAAAAAGTAAGGAATTAGAAAAAAGAAACAATTATGAACCTTATAAAGGTATTAAGGATAAGGGATTCTAA

Upstream 100 bases:

>100_bases
TTGCTCAATTAGCCATAACCGATCCTAAGTGTTTTGAAAAAATTGTTTCTTCCGTAAGTCAGTAGAAAAAAGAATATAAT
TAAGAAAATAATTATAAATA

Downstream 100 bases:

>100_bases
ATATGGAAAATTATTCTTCTTTACTAATTGGTGGAAAACAATTTTCCAGTAGATTAATGGTTGGTACTGGCAAATACAAA
TCTACTCAAGATATGGTGGC

Product: putative photosystem I assembly related protein Ycf37

Products: NA

Alternate protein names: Photosystem I Assembly Related Protein Ycf; Tetratricopeptide Repeat Domain Protein; Photosystem I Assembly Protein; Photosystem I Assembly Related Protein; Tetratricopeptide Repeat Protein; TPR Repeat-Containing Photosystem I Assembly Protein Ycf; TPR Domain-Containing Protein

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MEISSFQSYLIILFVVLIIISIFVFRQFLKTRSEELNLVKFEQKGLDSLTQATELYEFGSIQIKKRLYPEATKTFLKAIE
NYENEPDEAKAIINNALGFSYAAQNEFKKAIKHYKSAIKSLPEYPIALNNLASAQQRLLEYDLAYETYQKVLVIDPKNKT
AIKKSKELEKRNNYEPYKGIKDKGF

Sequences:

>Translated_185_residues
MEISSFQSYLIILFVVLIIISIFVFRQFLKTRSEELNLVKFEQKGLDSLTQATELYEFGSIQIKKRLYPEATKTFLKAIE
NYENEPDEAKAIINNALGFSYAAQNEFKKAIKHYKSAIKSLPEYPIALNNLASAQQRLLEYDLAYETYQKVLVIDPKNKT
AIKKSKELEKRNNYEPYKGIKDKGF
>Mature_185_residues
MEISSFQSYLIILFVVLIIISIFVFRQFLKTRSEELNLVKFEQKGLDSLTQATELYEFGSIQIKKRLYPEATKTFLKAIE
NYENEPDEAKAIINNALGFSYAAQNEFKKAIKHYKSAIKSLPEYPIALNNLASAQQRLLEYDLAYETYQKVLVIDPKNKT
AIKKSKELEKRNNYEPYKGIKDKGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21482; Mature: 21482

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEISSFQSYLIILFVVLIIISIFVFRQFLKTRSEELNLVKFEQKGLDSLTQATELYEFGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
IQIKKRLYPEATKTFLKAIENYENEPDEAKAIINNALGFSYAAQNEFKKAIKHYKSAIKS
HHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LPEYPIALNNLASAQQRLLEYDLAYETYQKVLVIDPKNKTAIKKSKELEKRNNYEPYKGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC
KDKGF
CCCCC
>Mature Secondary Structure
MEISSFQSYLIILFVVLIIISIFVFRQFLKTRSEELNLVKFEQKGLDSLTQATELYEFGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
IQIKKRLYPEATKTFLKAIENYENEPDEAKAIINNALGFSYAAQNEFKKAIKHYKSAIKS
HHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LPEYPIALNNLASAQQRLLEYDLAYETYQKVLVIDPKNKTAIKKSKELEKRNNYEPYKGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC
KDKGF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA