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The map label for this gene is 123969393

Identifier: 123969393

GI number: 123969393

Start: 1593900

End: 1595888

Strand: Reverse

Name: 123969393

Synonym: A9601_18611

Alternate gene names: NA

Gene position: 1595888-1593900 (Counterclockwise)

Preceding gene: 123969394

Following gene: 123969391

Centisome position: 95.57

GC content: 36.35

Gene sequence:

>1989_bases
ATGCAATCAAGTACAAATTCAACTGTAAATAGATCTACTCATGATTCATCTAGATCTAAAAGTAATACTCCAGCTCTACG
AGTAATACCTCTTGGAGGATTACATGAAATAGGAAAAAACACTTGCGTTTTTGAATATGGCGATGAATTAATGCTTGTTG
ATGCTGGCCTAGCTTTCCCATCTGATGGTATGCATGGCGTAAACGTTGTTATGCCTGATACAACTTTTTTAAAAGAAAAT
CAAAGAAGAATAAAAGGAATGATTGTCACTCACGGTCATGAAGATCACATTGGTGGTATTTCTCATCATCTAAAGCATTT
TAATATTCCCATTATTTATGGCCCAAGATTGGCAATGTCAATGCTTAGAGGAAAAATGGAGGAAGCAGGGGTATCTGATA
GAACAACTATACAGACAGTAAATCCAAGAGATGTTGTAAAAGTAGGACAACATTTTTCTGTTGAATTTATTCGAAATACC
CATTCTATTTGCGATAGTTTTTCTTTAGCAGTTACAACACCTGTTGGCACAATTATTTTTACAGGAGATTTTAAGTTTGA
CCATATGCCAGTAGATGGAGAGCAATTTGATATTGAAAGAATGGTGCATTATGGAGAGAAGGGAGTTTTATGTATGTTCA
GTGATTCGACTAATGCCGAAGTTCCAGGTTTTTGTCCTTCTGAGAAGACTATCTACCCCTCTTTAGAAAAACATATTGCA
GAGGCAAAAGAACGAGTTATCCTTACTACTTTTGCTAGTTCTGTGCATAGAGTGACCATGATCTTAGAATTGGCCATGAA
ACATGGAAGAAAGGTCGGTTTGTTAGGTAGATCGATGATTAATGTTATTGCTAAGGCAAGAGATATTGGTTATATGAAAT
GCCCAGATGATTTGTTCGTTCCTATCAAGCAAATTAGAGATTTGCCAGATAGGGAGACCTTATTATTGATGACCGGTAGT
CAAGGAGAACCCCTAGCAGCATTAAGCAGAATCTCTCGTGGTGAACATCAGCATGTTCGTCTCAAGACTACTGATACTGT
AATATTTTCAGCCAGCCCAATTCCTGGTAATACTATTTCTGTTGTTAATACAATAGATAGATTAATGAAACTCGGAGCAA
AGGTTGTTTATGGAAAGGGTGAGAATATTCATGTTTCTGGTCATGGTTTTCAAGAAGATCAAAAGTTAATGTTGGCACTC
GCAAAACCTAAGTTTTTTGTTCCTGTTCATGGAGAACATAGAATGCTTGTTTGTCATGGGAAGAGTGCACAAACTATGGG
GGTTCCAAAAGAAAATATCTTAATTATTGAAAATGGAGATGTAGTTGAGCTAACACCTAATTCTATTCAAAAGGGTGATC
CTGTAAAAGCTGGTGTTGAACTACTTGATAACTCACGAAATGGGATAGTAGATGCTCGAGTATTAAAGGAAAGGCAGCAA
TTAGCTGGGGATGGTGTAGTAACTGTTTTAGCTCCTATTAGTACAGATGGGAAGATGGTTGCGCCTCCCAGAGTTAATTT
AAGAGGAGTTGTTACTACTGCAGAGCCAAGAAAAATGTCTATGTGGACAGAACGAGAAATAAGTTGGGTCTTAGAAAATA
GATGGAAACAATTATCCAGACAAACTGGGCCGAATAATTTTGAGGTAGATTGGATTGGTGTACAAAGAGAAATTGAAAAT
GGTTTATCGAGAAGAATGAGAAGAGAATTACAAGTTGAACCACTTATTTTGTGTTTAGTTCAACCTGCTCCAAGTGGAAC
TCGTGCTTATATTCCAAAGATTACCGAAGAGCAAAATTTCTCCAATAGAAATAGAAATAATAATAATTTCCATAAGAAAT
CAAACAATAATAATCATCCCAATAGTTCAAATAACCCACAAAATACCCAAAAAAGTCCAAAAGTATCACAGAATCCATCA
GCTGAGACTGCTACAGAAGATTCATTTGAAGGTAGAACAAGAAGAAGAAGATCTGCTGTTACATCTTAA

Upstream 100 bases:

>100_bases
TTATCCTGAATTCCCTATAATAGGGATTATATTTAACTTGATAATTAAATTTAAATAAACCTTATTTGATTACAAGCAGG
CCTTCATAAATTTCAAAATT

Downstream 100 bases:

>100_bases
CTTTTTTCAAAATTTATATAGTTTTTATCCCAAACAATTTTTAAAAACTCTTGCAGATTAATTTGACCTTTATTTTTTTC
ATAAATTGAAGTTGCTAATT

Product: metallo-beta-lactamase superfamily hydrolase

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 662; Mature: 662

Protein sequence:

>662_residues
MQSSTNSTVNRSTHDSSRSKSNTPALRVIPLGGLHEIGKNTCVFEYGDELMLVDAGLAFPSDGMHGVNVVMPDTTFLKEN
QRRIKGMIVTHGHEDHIGGISHHLKHFNIPIIYGPRLAMSMLRGKMEEAGVSDRTTIQTVNPRDVVKVGQHFSVEFIRNT
HSICDSFSLAVTTPVGTIIFTGDFKFDHMPVDGEQFDIERMVHYGEKGVLCMFSDSTNAEVPGFCPSEKTIYPSLEKHIA
EAKERVILTTFASSVHRVTMILELAMKHGRKVGLLGRSMINVIAKARDIGYMKCPDDLFVPIKQIRDLPDRETLLLMTGS
QGEPLAALSRISRGEHQHVRLKTTDTVIFSASPIPGNTISVVNTIDRLMKLGAKVVYGKGENIHVSGHGFQEDQKLMLAL
AKPKFFVPVHGEHRMLVCHGKSAQTMGVPKENILIIENGDVVELTPNSIQKGDPVKAGVELLDNSRNGIVDARVLKERQQ
LAGDGVVTVLAPISTDGKMVAPPRVNLRGVVTTAEPRKMSMWTEREISWVLENRWKQLSRQTGPNNFEVDWIGVQREIEN
GLSRRMRRELQVEPLILCLVQPAPSGTRAYIPKITEEQNFSNRNRNNNNFHKKSNNNNHPNSSNNPQNTQKSPKVSQNPS
AETATEDSFEGRTRRRRSAVTS

Sequences:

>Translated_662_residues
MQSSTNSTVNRSTHDSSRSKSNTPALRVIPLGGLHEIGKNTCVFEYGDELMLVDAGLAFPSDGMHGVNVVMPDTTFLKEN
QRRIKGMIVTHGHEDHIGGISHHLKHFNIPIIYGPRLAMSMLRGKMEEAGVSDRTTIQTVNPRDVVKVGQHFSVEFIRNT
HSICDSFSLAVTTPVGTIIFTGDFKFDHMPVDGEQFDIERMVHYGEKGVLCMFSDSTNAEVPGFCPSEKTIYPSLEKHIA
EAKERVILTTFASSVHRVTMILELAMKHGRKVGLLGRSMINVIAKARDIGYMKCPDDLFVPIKQIRDLPDRETLLLMTGS
QGEPLAALSRISRGEHQHVRLKTTDTVIFSASPIPGNTISVVNTIDRLMKLGAKVVYGKGENIHVSGHGFQEDQKLMLAL
AKPKFFVPVHGEHRMLVCHGKSAQTMGVPKENILIIENGDVVELTPNSIQKGDPVKAGVELLDNSRNGIVDARVLKERQQ
LAGDGVVTVLAPISTDGKMVAPPRVNLRGVVTTAEPRKMSMWTEREISWVLENRWKQLSRQTGPNNFEVDWIGVQREIEN
GLSRRMRRELQVEPLILCLVQPAPSGTRAYIPKITEEQNFSNRNRNNNNFHKKSNNNNHPNSSNNPQNTQKSPKVSQNPS
AETATEDSFEGRTRRRRSAVTS
>Mature_662_residues
MQSSTNSTVNRSTHDSSRSKSNTPALRVIPLGGLHEIGKNTCVFEYGDELMLVDAGLAFPSDGMHGVNVVMPDTTFLKEN
QRRIKGMIVTHGHEDHIGGISHHLKHFNIPIIYGPRLAMSMLRGKMEEAGVSDRTTIQTVNPRDVVKVGQHFSVEFIRNT
HSICDSFSLAVTTPVGTIIFTGDFKFDHMPVDGEQFDIERMVHYGEKGVLCMFSDSTNAEVPGFCPSEKTIYPSLEKHIA
EAKERVILTTFASSVHRVTMILELAMKHGRKVGLLGRSMINVIAKARDIGYMKCPDDLFVPIKQIRDLPDRETLLLMTGS
QGEPLAALSRISRGEHQHVRLKTTDTVIFSASPIPGNTISVVNTIDRLMKLGAKVVYGKGENIHVSGHGFQEDQKLMLAL
AKPKFFVPVHGEHRMLVCHGKSAQTMGVPKENILIIENGDVVELTPNSIQKGDPVKAGVELLDNSRNGIVDARVLKERQQ
LAGDGVVTVLAPISTDGKMVAPPRVNLRGVVTTAEPRKMSMWTEREISWVLENRWKQLSRQTGPNNFEVDWIGVQREIEN
GLSRRMRRELQVEPLILCLVQPAPSGTRAYIPKITEEQNFSNRNRNNNNFHKKSNNNNHPNSSNNPQNTQKSPKVSQNPS
AETATEDSFEGRTRRRRSAVTS

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR004613
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 73636; Mature: 73636

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS01292 UPF0036

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSTNSTVNRSTHDSSRSKSNTPALRVIPLGGLHEIGKNTCVFEYGDELMLVDAGLAFP
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCEEEEECCEEEEEECCCCCC
SDGMHGVNVVMPDTTFLKENQRRIKGMIVTHGHEDHIGGISHHLKHFNIPIIYGPRLAMS
CCCCCCCEEEECCCHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHCCCCEEECCHHHHH
MLRGKMEEAGVSDRTTIQTVNPRDVVKVGQHFSVEFIRNTHSICDSFSLAVTTPVGTIIF
HHHHHHHHCCCCCCCEEEECCCHHHHHHCCCCEEHHHHHHHHHHCCCCEEEECCCEEEEE
TGDFKFDHMPVDGEQFDIERMVHYGEKGVLCMFSDSTNAEVPGFCPSEKTIYPSLEKHIA
ECCCEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
EAKERVILTTFASSVHRVTMILELAMKHGRKVGLLGRSMINVIAKARDIGYMKCPDDLFV
HHHHCEEEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCEEECCHHHHH
PIKQIRDLPDRETLLLMTGSQGEPLAALSRISRGEHQHVRLKTTDTVIFSASPIPGNTIS
HHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCCHHH
VVNTIDRLMKLGAKVVYGKGENIHVSGHGFQEDQKLMLALAKPKFFVPVHGEHRMLVCHG
HHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCEEEEECCCCEEEEECCCCEEEEEEC
KSAQTMGVPKENILIIENGDVVELTPNSIQKGDPVKAGVELLDNSRNGIVDARVLKERQQ
CCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
LAGDGVVTVLAPISTDGKMVAPPRVNLRGVVTTAEPRKMSMWTEREISWVLENRWKQLSR
HCCCCEEEEEEEECCCCCEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
QTGPNNFEVDWIGVQREIENGLSRRMRRELQVEPLILCLVQPAPSGTRAYIPKITEEQNF
HCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCCCCCCC
SNRNRNNNNFHKKSNNNNHPNSSNNPQNTQKSPKVSQNPSAETATEDSFEGRTRRRRSAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
TS
CC
>Mature Secondary Structure
MQSSTNSTVNRSTHDSSRSKSNTPALRVIPLGGLHEIGKNTCVFEYGDELMLVDAGLAFP
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCEEEEECCEEEEEECCCCCC
SDGMHGVNVVMPDTTFLKENQRRIKGMIVTHGHEDHIGGISHHLKHFNIPIIYGPRLAMS
CCCCCCCEEEECCCHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHCCCCEEECCHHHHH
MLRGKMEEAGVSDRTTIQTVNPRDVVKVGQHFSVEFIRNTHSICDSFSLAVTTPVGTIIF
HHHHHHHHCCCCCCCEEEECCCHHHHHHCCCCEEHHHHHHHHHHCCCCEEEECCCEEEEE
TGDFKFDHMPVDGEQFDIERMVHYGEKGVLCMFSDSTNAEVPGFCPSEKTIYPSLEKHIA
ECCCEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
EAKERVILTTFASSVHRVTMILELAMKHGRKVGLLGRSMINVIAKARDIGYMKCPDDLFV
HHHHCEEEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCEEECCHHHHH
PIKQIRDLPDRETLLLMTGSQGEPLAALSRISRGEHQHVRLKTTDTVIFSASPIPGNTIS
HHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCCHHH
VVNTIDRLMKLGAKVVYGKGENIHVSGHGFQEDQKLMLALAKPKFFVPVHGEHRMLVCHG
HHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCEEEEECCCCEEEEECCCCEEEEEEC
KSAQTMGVPKENILIIENGDVVELTPNSIQKGDPVKAGVELLDNSRNGIVDARVLKERQQ
CCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
LAGDGVVTVLAPISTDGKMVAPPRVNLRGVVTTAEPRKMSMWTEREISWVLENRWKQLSR
HCCCCEEEEEEEECCCCCEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
QTGPNNFEVDWIGVQREIENGLSRRMRRELQVEPLILCLVQPAPSGTRAYIPKITEEQNF
HCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCCCCCCC
SNRNRNNNNFHKKSNNNNHPNSSNNPQNTQKSPKVSQNPSAETATEDSFEGRTRRRRSAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
TS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]