Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123969383

Identifier: 123969383

GI number: 123969383

Start: 1582222

End: 1582653

Strand: Reverse

Name: 123969383

Synonym: A9601_18511

Alternate gene names: NA

Gene position: 1582653-1582222 (Counterclockwise)

Preceding gene: 123969384

Following gene: 123969381

Centisome position: 94.78

GC content: 31.02

Gene sequence:

>432_bases
ATGAAAAGAGTAATTTCTATTGAAGATTTAAAGGGATTATTTACTAAATCTTATGGAACAGATGCACCTACAAAACAAAA
GTGGGCTGAATTTTATAATGAGAATGTTATTTTTACAGATCCAACTCAGGAAACAGAGGGCTTAGATTCTTATGTCAAAG
CTCAAGAAAAGCTAGTTAAAAGATGTGATGATGTTTTTTTAGAAACTCATGCAATTTCCATAACTGGGGATTGTGGATTT
GTTGAATGGACAATGGGTTTAAAAATTATGGGTAAAGAATTTATTTATCCTGGAACTACTCGTTTATTATTTGGCGAAAA
TGGATTAATAAAAGAGCACAGAGATTACTTTGATTTTTGTGGTCCAACTTTTGGACCAGTACCTATTTTAGGACCTTTTA
TAAGATGGCTTTATAGTAAATTTGTATCTTGA

Upstream 100 bases:

>100_bases
GTAGAGCATCTCCTTGCCAAGGAGAATGTCGAGAGTTCGAATCTCTTCATCCGCTTTTAATGTTTGTATCTTTTAAAATA
CTTTAAAAGATAATTGCGTA

Downstream 100 bases:

>100_bases
TTTTGTTTTTATGAAAAACAGAGTTCTTTATATTTCTCGAATTAATAAATTTTGAGATATGACTTCTTTAAAATCAAATT
GAGAATAAAATAATTTTTTA

Product: transcription regulator

Products: NA

Alternate protein names: Transcription Regulator

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKRVISIEDLKGLFTKSYGTDAPTKQKWAEFYNENVIFTDPTQETEGLDSYVKAQEKLVKRCDDVFLETHAISITGDCGF
VEWTMGLKIMGKEFIYPGTTRLLFGENGLIKEHRDYFDFCGPTFGPVPILGPFIRWLYSKFVS

Sequences:

>Translated_143_residues
MKRVISIEDLKGLFTKSYGTDAPTKQKWAEFYNENVIFTDPTQETEGLDSYVKAQEKLVKRCDDVFLETHAISITGDCGF
VEWTMGLKIMGKEFIYPGTTRLLFGENGLIKEHRDYFDFCGPTFGPVPILGPFIRWLYSKFVS
>Mature_143_residues
MKRVISIEDLKGLFTKSYGTDAPTKQKWAEFYNENVIFTDPTQETEGLDSYVKAQEKLVKRCDDVFLETHAISITGDCGF
VEWTMGLKIMGKEFIYPGTTRLLFGENGLIKEHRDYFDFCGPTFGPVPILGPFIRWLYSKFVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16412; Mature: 16412

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVISIEDLKGLFTKSYGTDAPTKQKWAEFYNENVIFTDPTQETEGLDSYVKAQEKLVK
CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH
RCDDVFLETHAISITGDCGFVEWTMGLKIMGKEFIYPGTTRLLFGENGLIKEHRDYFDFC
HHHHHHHHHEEEEEECCCCEEEHCCCCEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHC
GPTFGPVPILGPFIRWLYSKFVS
CCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRVISIEDLKGLFTKSYGTDAPTKQKWAEFYNENVIFTDPTQETEGLDSYVKAQEKLVK
CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH
RCDDVFLETHAISITGDCGFVEWTMGLKIMGKEFIYPGTTRLLFGENGLIKEHRDYFDFC
HHHHHHHHHEEEEEECCCCEEEHCCCCEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHC
GPTFGPVPILGPFIRWLYSKFVS
CCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA