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The map label for this gene is 123969356

Identifier: 123969356

GI number: 123969356

Start: 1557162

End: 1557950

Strand: Reverse

Name: 123969356

Synonym: A9601_18241

Alternate gene names: NA

Gene position: 1557950-1557162 (Counterclockwise)

Preceding gene: 123969357

Following gene: 123969355

Centisome position: 93.3

GC content: 33.08

Gene sequence:

>789_bases
ATGATAACTTTTAAAAAAGTTAAGGTTTGTTTTTTATTAATTTTTATTTTTTTCAATATTTTTTATATTGCACCATGCTA
TTCATTATCTTCGAGAGAGGATTTGTTTAAAAATGCGTTAGATCTTAGTTCAGGCGGAAAATTTAATCTCGCGTTACAAG
AATGGAATCAATATCTCGATTCTTATCCTGATGATGCTGCAGGTTTTAGCAATAGAGGAAATGTAAGACTTGTCGTAGGA
GATGTTAAGGGATCAATAGATGACCAAAATAAGGCAATAAGTTTGAATCCTAGTGAAATAGACCCTTACATTAACAGGGG
GATTTCTGAGGAAGCATTGGGTTTATGGTCGCAAGCGAAAAAGGATTATATGTTCGTTATTTCCCTAGATAGTAAAAATT
TCTCTGCATTATATAATTTAGCTAATGTAGAAGGTTCTACATCCCATTGGGATAAAGCAAGAGATTTATTCTCCAAAGCT
GCTTTATATAATCCAGGATTTGCCATGGCTAGGTCAAGTTTGGCGTTAGCAGATTTCCAGTTGGGAAATATTGATGAAGC
TGAAAAAGAATTAATAAAGTTAATTAGACGTTATCCAACTTTTGCAGATGCTAGGGCAGCTTTAACAGCTTTGAGTTGGT
CTAATGGTGAAGCTGGTAAAGCAGAGAGTAATTGGATAGCGGTAACTGAATTAGATCCTAGATATAGTGATGAAGAATGG
TTAAAAAAAATAAGAAGATGGCCTCCTCAACCAATTAAAGATTTAATGAATTTTATCGATTTAAAATAA

Upstream 100 bases:

>100_bases
TTTGTTGTTGAGCCATATCTTATTAAAATTGGTTTTCTTACGAGAACTCCTCGAGGAAGATTGCTTACTGCTTTAGGGAA
AAAGTACATTGATTCAAAAG

Downstream 100 bases:

>100_bases
ATAATGAATAGAGATCAGTTACATAAAAAAATTGATTCGTTTAATGATGAACTAATTAACTTAAGAAGACATATCCATGA
ACATCCGGAATTAAGTGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MITFKKVKVCFLLIFIFFNIFYIAPCYSLSSREDLFKNALDLSSGGKFNLALQEWNQYLDSYPDDAAGFSNRGNVRLVVG
DVKGSIDDQNKAISLNPSEIDPYINRGISEEALGLWSQAKKDYMFVISLDSKNFSALYNLANVEGSTSHWDKARDLFSKA
ALYNPGFAMARSSLALADFQLGNIDEAEKELIKLIRRYPTFADARAALTALSWSNGEAGKAESNWIAVTELDPRYSDEEW
LKKIRRWPPQPIKDLMNFIDLK

Sequences:

>Translated_262_residues
MITFKKVKVCFLLIFIFFNIFYIAPCYSLSSREDLFKNALDLSSGGKFNLALQEWNQYLDSYPDDAAGFSNRGNVRLVVG
DVKGSIDDQNKAISLNPSEIDPYINRGISEEALGLWSQAKKDYMFVISLDSKNFSALYNLANVEGSTSHWDKARDLFSKA
ALYNPGFAMARSSLALADFQLGNIDEAEKELIKLIRRYPTFADARAALTALSWSNGEAGKAESNWIAVTELDPRYSDEEW
LKKIRRWPPQPIKDLMNFIDLK
>Mature_262_residues
MITFKKVKVCFLLIFIFFNIFYIAPCYSLSSREDLFKNALDLSSGGKFNLALQEWNQYLDSYPDDAAGFSNRGNVRLVVG
DVKGSIDDQNKAISLNPSEIDPYINRGISEEALGLWSQAKKDYMFVISLDSKNFSALYNLANVEGSTSHWDKARDLFSKA
ALYNPGFAMARSSLALADFQLGNIDEAEKELIKLIRRYPTFADARAALTALSWSNGEAGKAESNWIAVTELDPRYSDEEW
LKKIRRWPPQPIKDLMNFIDLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Caenorhabditis elegans, GI115532690, Length=195, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=195, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI17647755, Length=190, Percent_Identity=27.8947368421053, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24585827, Length=190, Percent_Identity=27.8947368421053, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24585829, Length=190, Percent_Identity=27.8947368421053, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 29671; Mature: 29671

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITFKKVKVCFLLIFIFFNIFYIAPCYSLSSREDLFKNALDLSSGGKFNLALQEWNQYLD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHH
SYPDDAAGFSNRGNVRLVVGDVKGSIDDQNKAISLNPSEIDPYINRGISEEALGLWSQAK
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCHHHCCHHHHCCCCHHHHHHHHHCC
KDYMFVISLDSKNFSALYNLANVEGSTSHWDKARDLFSKAALYNPGFAMARSSLALADFQ
CCEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
LGNIDEAEKELIKLIRRYPTFADARAALTALSWSNGEAGKAESNWIAVTELDPRYSDEEW
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHH
LKKIRRWPPQPIKDLMNFIDLK
HHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MITFKKVKVCFLLIFIFFNIFYIAPCYSLSSREDLFKNALDLSSGGKFNLALQEWNQYLD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHH
SYPDDAAGFSNRGNVRLVVGDVKGSIDDQNKAISLNPSEIDPYINRGISEEALGLWSQAK
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCHHHCCHHHHCCCCHHHHHHHHHCC
KDYMFVISLDSKNFSALYNLANVEGSTSHWDKARDLFSKAALYNPGFAMARSSLALADFQ
CCEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
LGNIDEAEKELIKLIRRYPTFADARAALTALSWSNGEAGKAESNWIAVTELDPRYSDEEW
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHH
LKKIRRWPPQPIKDLMNFIDLK
HHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]